[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4133	203371_s_at	NM_002491	NDUFB3		NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa

Fetching correlation data, please wait...
Getting list of correlations for id 4133.
Getting list of p-values for id 4133.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.137 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203371_s_at	218190_s_at	NM_013387	UQCR10	0.778634	2.832348e-18	6.547540e-14	6.547540e-14
2	203371_s_at	201134_x_at	NM_001867	COX7C	0.778387	2.949211e-18	6.817692e-14	3.408846e-14
3	203371_s_at	217491_x_at	AF042165	COX7C	0.748988	2.552935e-16	5.901620e-12	1.967207e-12
4	203371_s_at	202077_at	NM_005003	NDUFAB1	0.729033	3.767407e-15	8.709115e-11	2.177279e-11
5	203371_s_at	225413_at	BG291685	USMG5	0.715407	2.073042e-14	4.792250e-10	9.584501e-11
6	203371_s_at	221255_s_at	NM_031298	TMEM93	0.711269	3.412218e-14	7.888024e-10	1.314671e-10
7	203371_s_at	224302_s_at	AF271777	MRPS36	0.706435	6.041193e-14	1.396543e-9	1.995061e-10
8	203371_s_at	218654_s_at	NM_016071	MRPS33	0.697568	1.672848e-13	3.867122e-9	4.833903e-10
9	203371_s_at	218042_at	NM_016129	COPS4	0.692381	2.984572e-13	6.899435e-9	7.666039e-10
10	203371_s_at	223042_s_at	BC000255	FUNDC2	0.689508	4.091523e-13	9.458374e-9	9.458374e-10
11	203371_s_at	215171_s_at	AK023063	TIMM17A	0.684114	7.325568e-13	1.693452e-8	1.539501e-9
12	203371_s_at	218160_at	NM_014222	NDUFA8	0.683683	7.670822e-13	1.773264e-8	1.477720e-9
13	203371_s_at	202325_s_at	NM_001685	ATP5J	0.678654	1.304701e-12	3.016077e-8	2.320059e-9
14	203371_s_at	222992_s_at	AF261090	NDUFB9	0.677802	1.425975e-12	3.296426e-8	2.354590e-9
15	203371_s_at	203039_s_at	NM_005006	NDUFS1	0.675170	1.873510e-12	4.330994e-8	2.887329e-9
16	203371_s_at	223519_at	AW069181	ZAK	0.666762	4.397786e-12	1.016636e-7	6.353976e-9
17	203371_s_at	209303_at	BC005270	NDUFS4	0.665910	4.787958e-12	1.106832e-7	6.510778e-9
18	203371_s_at	225201_s_at	BF569593	MRPL14	0.661874	7.133029e-12	1.648942e-7	9.160791e-9
19	203371_s_at	201568_at	NM_014402	UQCRQ	0.657282	1.114469e-11	2.576318e-7	1.355957e-8
20	203371_s_at	209513_s_at	BC004331	HSDL2	0.656478	1.204136e-11	2.783601e-7	1.391801e-8
21	203371_s_at	209065_at	BC005230	UQCRB	0.652549	1.751196e-11	4.048239e-7	1.927733e-8
22	203371_s_at	225298_at	AA074597	PNKD	0.651684	1.900403e-11	4.393162e-7	1.996892e-8
23	203371_s_at	1552309_a_at	NM_144573	NEXN	0.648172	2.641172e-11	6.105596e-7	2.654607e-8
24	203371_s_at	219156_at	NM_018373	SYNJ2BP	0.646081	3.206581e-11	7.412652e-7	3.088605e-8
25	203371_s_at	217773_s_at	NM_002489	NDUFA4	0.644761	3.621311e-11	8.371384e-7	3.348553e-8
26	203371_s_at	201674_s_at	BC000729	AKAP1	0.642137	4.604280e-11	1.064371e-6	4.093736e-8
27	203371_s_at	218101_s_at	NM_004549	NDUFC2	0.641251	4.990846e-11	1.153734e-6	4.273088e-8
28	203371_s_at	200789_at	NM_001398	ECH1	0.640305	5.437236e-11	1.256926e-6	4.489021e-8
29	203371_s_at	227251_at	AI431597	DCAF5	0.639746	5.718906e-11	1.322039e-6	4.558757e-8
30	203371_s_at	201754_at	NM_004374	COX6C	0.638627	6.325776e-11	1.462330e-6	4.874432e-8
31	203371_s_at	209066_x_at	M26700	UQCRB	0.638471	6.415227e-11	1.483008e-6	4.783897e-8
32	203371_s_at	225350_s_at	AV701229	ZYG11B	0.637457	7.026106e-11	1.624225e-6	5.075703e-8
33	203371_s_at	203152_at	NM_003776	MRPL40	0.633466	1.001819e-10	2.315906e-6	7.017897e-8
34	203371_s_at	201319_at	NM_006471	MYL12A	0.633442	1.003950e-10	2.320831e-6	6.825974e-8
35	203371_s_at	203781_at	NM_004891	MRPL33	0.632863	1.056512e-10	2.442339e-6	6.978113e-8
36	203371_s_at	202305_s_at	AI685892	FEZ2	0.631004	1.243748e-10	2.875173e-6	7.986592e-8
37	203371_s_at	213846_at	AA382702	COX7C	0.630117	1.343841e-10	3.106557e-6	8.396099e-8
38	203371_s_at	218479_s_at	NM_022459	XPO4	0.628960	1.486211e-10	3.435674e-6	9.041247e-8
39	203371_s_at	225096_at	AJ272196	C17orf79	0.624259	2.227759e-10	5.149911e-6	1.320490e-7
40	203371_s_at	212600_s_at	AV727381	UQCRC2	0.623886	2.299968e-10	5.316835e-6	1.329209e-7
41	203371_s_at	223119_s_at	BC000226	USP47	0.618755	3.548335e-10	8.202687e-6	2.000655e-7
42	203371_s_at	214748_at	U50529	N4BP2L2	0.618460	3.636925e-10	8.407480e-6	2.001781e-7
43	203371_s_at	224867_at	BF244614	C1orf151	0.616011	4.459949e-10	1.031007e-5	2.397690e-7
44	203371_s_at	202001_s_at	NM_002490	NDUFA6	0.614792	4.933331e-10	1.140438e-5	2.591905e-7
45	203371_s_at	200086_s_at	AA854966	COX4I1	0.612142	6.133604e-10	1.417905e-5	3.150900e-7
46	203371_s_at	201501_s_at	NM_002092	GRSF1	0.611774	6.320973e-10	1.461219e-5	3.176564e-7
47	203371_s_at	203613_s_at	NM_002493	NDUFB6	0.611235	6.605715e-10	1.527043e-5	3.249028e-7
48	203371_s_at	201536_at	AL048503	DUSP3	0.611020	6.722499e-10	1.554040e-5	3.237584e-7
49	203371_s_at	224331_s_at	AB049654	MRPL36	0.610828	6.828441e-10	1.578531e-5	3.221491e-7
50	203371_s_at	232001_at	AW193600	LOC439949	0.610650	6.928020e-10	1.601550e-5	3.203101e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation