[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1639	200036_s_at	NM_007104	RPL10A		ribosomal protein L10a
18204	229563_s_at	BG231561	RPL10A		ribosomal protein L10a

Fetching correlation data, please wait...
Getting list of correlations for id 1639.
Getting list of p-values for id 1639.
1 of 2 done.
Getting list of correlations for id 18204.
Getting list of p-values for id 18204.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.181 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	200036_s_at	200002_at	NM_007209	RPL35	0.721379	9.940891e-15	4.596072e-10	4.596072e-10
2	200036_s_at	213687_s_at	BE968801	RPL35A	0.688383	4.624606e-13	2.138140e-8	1.069070e-8
3	200036_s_at	200949_x_at	NM_001023	RPS20	0.685039	6.635238e-13	3.067736e-8	1.022579e-8
4	200036_s_at	216380_x_at	AC005011		0.672675	2.420292e-12	1.118998e-7	2.797494e-8
5	200036_s_at	202300_at	NM_006402	HBXIP	0.656901	1.156053e-11	5.344893e-7	1.068979e-7
6	200036_s_at	220755_s_at	NM_016947	C6orf48	0.647874	2.715398e-11	1.255437e-6	2.092396e-7
7	200036_s_at	234873_x_at	AJ224080	RPL7A	0.646510	3.081941e-11	1.424905e-6	2.035578e-7
8	200036_s_at	205036_at	NM_007080	LSM6	0.646006	3.228718e-11	1.492766e-6	1.865957e-7
9	200036_s_at	209177_at	BC002873	NDUFAF3	0.643253	4.158531e-11	1.922655e-6	2.136284e-7
10	200036_s_at	216505_x_at	AL118502	RPS10P5	0.638624	6.327791e-11	2.925591e-6	2.925591e-7
11	200036_s_at	217917_s_at	NM_014183	DYNLRB1	0.638204	6.570853e-11	3.037968e-6	2.761789e-7
12	200036_s_at	214003_x_at	BF184532	RPS20	0.632236	1.116361e-10	5.161383e-6	4.301153e-7
13	200036_s_at	200093_s_at	N32864	HINT1	0.626899	1.776358e-10	8.212815e-6	6.317550e-7
14	200036_s_at	202233_s_at	NM_006004	UQCRH	0.615876	4.509968e-10	2.085139e-5	1.489385e-6
15	200036_s_at	204246_s_at	NM_007234	DCTN3	0.607910	8.649830e-10	3.999162e-5	2.666108e-6
16	200036_s_at	228019_s_at	AV758614	MRPS18C	0.606168	9.949618e-10	4.600107e-5	2.875067e-6
17	200036_s_at	211542_x_at	BC004334	RPS10	0.603471	1.233779e-9	5.704255e-5	3.355444e-6
18	200036_s_at	202591_s_at	NM_003143	SSBP1	0.600954	1.505312e-9	6.959659e-5	3.866477e-6
19	200036_s_at	212716_s_at	AW083133	EIF3K	0.596607	2.113954e-9	9.773654e-5	5.144029e-6
20	229563_s_at	201306_s_at	NM_006401	ANP32B	0.595484	2.305916e-9	1.066117e-4	5.330585e-6
21	200036_s_at	224625_x_at	BE568651	SERF2	0.594691	2.451360e-9	1.133362e-4	5.396960e-6
22	200036_s_at	204559_s_at	NM_016199	LSM7	0.592667	2.863300e-9	1.323818e-4	6.017355e-6
23	200036_s_at	221475_s_at	NM_002948	RPL15	0.592440	2.913477e-9	1.347017e-4	5.856596e-6
24	200036_s_at	209475_at	AF106069	USP15	-0.591174	3.208863e-9	1.483586e-4	6.181606e-6
25	229563_s_at	224781_s_at	AI923119	RBM17	0.589115	3.751255e-9	1.734355e-4	6.937421e-6
26	200036_s_at	226978_at	AA910945	PPARA	-0.586693	4.501261e-9	2.081113e-4	8.004281e-6
27	200036_s_at	200817_x_at	NM_001014	RPS10	0.584248	5.402504e-9	2.497794e-4	9.251088e-6
28	200036_s_at	201812_s_at	NM_019059		0.582554	6.125243e-9	2.831945e-4	1.011409e-5
29	200036_s_at	1553185_at	NM_152573	RASEF	0.578672	8.146011e-9	3.766227e-4	1.298699e-5
30	200036_s_at	201237_at	AV685920	CAPZA2	-0.574917	1.069499e-8	4.944722e-4	1.648241e-5
31	200036_s_at	208821_at	J04564	SNRPB	0.572658	1.257736e-8	5.815018e-4	1.875812e-5
32	200036_s_at	218011_at	NM_024292	UBL5	0.571947	1.323226e-8	6.117805e-4	1.911814e-5
33	200036_s_at	217918_at	NM_014183	DYNLRB1	0.571109	1.404626e-8	6.494149e-4	1.967924e-5
34	200036_s_at	1553186_x_at	NM_152573	RASEF	0.570010	1.518653e-8	7.021342e-4	2.065101e-5
35	200036_s_at	200025_s_at	NM_000988	RPL27	0.568792	1.655316e-8	7.653189e-4	2.186625e-5
36	200036_s_at	202299_s_at	NM_006402	HBXIP	0.567514	1.811190e-8	8.373856e-4	2.326071e-5
37	200036_s_at	211284_s_at	BC000324	GRN	0.566042	2.008191e-8	9.284670e-4	2.509370e-5
38	200036_s_at	225190_x_at	AW402660	RPL35A	0.565137	2.139134e-8	9.890070e-4	2.602650e-5
39	200036_s_at	200652_at	NM_003145	SSR2	0.564886	2.176970e-8	1.006500e-3	2.580770e-5
40	200036_s_at	218213_s_at	NM_014206	C11orf10	0.561786	2.698911e-8	1.247814e-3	3.119536e-5
41	200036_s_at	226520_at	AI831506	LCOR	-0.561463	2.759575e-8	1.275862e-3	3.111858e-5
42	200036_s_at	208742_s_at	U78303	SAP18	0.559483	3.161523e-8	1.461699e-3	3.480235e-5
43	200036_s_at	218427_at	NM_006643	SDCCAG3	-0.557602	3.594554e-8	1.661906e-3	3.864898e-5
44	200036_s_at	222270_at	BG540048	SMEK2	-0.556435	3.890790e-8	1.798868e-3	4.088336e-5
45	200036_s_at	203133_at	NM_006808	SEC61B	0.556426	3.893367e-8	1.800059e-3	4.000131e-5
46	229563_s_at	221984_s_at	AL040896	FAM134A	0.555486	4.148904e-8	1.918204e-3	4.170009e-5
47	200036_s_at	200018_at	NM_001017	RPS13	0.555349	4.187417e-8	1.936010e-3	4.119171e-5
48	200036_s_at	200095_x_at	AA320764	RPS10	0.555177	4.236299e-8	1.958611e-3	4.080439e-5
49	200036_s_at	201861_s_at	BF965566	LRRFIP1	0.554231	4.515270e-8	2.087590e-3	4.260387e-5
50	200036_s_at	208904_s_at	BC000354	RPS28	0.554037	4.574401e-8	2.114929e-3	4.229857e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation