[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5038	204641_at	NM_002497	NEK2		NIMA (never in mitosis gene a)-related kinase 2
7987	211080_s_at	Z25425	NEK2		NIMA (never in mitosis gene a)-related kinase 2

Fetching correlation data, please wait...
Getting list of correlations for id 5038.
Getting list of p-values for id 5038.
1 of 2 done.
Getting list of correlations for id 7987.
Getting list of p-values for id 7987.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.205 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	211080_s_at	1554768_a_at	AF394735	MAD2L1	0.913749	8.043959e-34	3.719044e-29	3.719044e-29
2	211080_s_at	201476_s_at	AI692974	RRM1	0.907289	1.362402e-32	6.298932e-28	3.149466e-28
3	211080_s_at	224407_s_at	AF344882	MST4	0.895012	1.735584e-30	8.024301e-26	2.674767e-26
4	211080_s_at	214544_s_at	NM_003825	SNAP23	0.892749	3.970937e-30	1.835923e-25	4.589808e-26
5	211080_s_at	200722_s_at	BG258784	CAPRIN1	0.882142	1.524571e-28	7.048701e-24	1.409740e-24
6	211080_s_at	1552619_a_at	NM_018685	ANLN	0.881654	1.788291e-28	8.267985e-24	1.377997e-24
7	211080_s_at	204128_s_at	NM_002915	RFC3	0.874379	1.774967e-27	8.206381e-23	1.172340e-23
8	211080_s_at	215236_s_at	AV721177	PICALM	0.870647	5.454338e-27	2.521759e-22	3.152198e-23
9	211080_s_at	201946_s_at	AL545982	CCT2	0.870130	6.354267e-27	2.937832e-22	3.264258e-23
10	211080_s_at	213548_s_at	BG257762	CDV3	0.863656	4.080647e-26	1.886646e-21	1.886646e-22
11	211080_s_at	1565269_s_at	AF047022	ATF1	0.863555	4.197460e-26	1.940654e-21	1.764231e-22
12	211080_s_at	209131_s_at	U55936	SNAP23	0.863281	4.530921e-26	2.094826e-21	1.745688e-22
13	211080_s_at	201742_x_at	NM_006924	SRSF1	0.862860	5.095398e-26	2.355807e-21	1.812159e-22
14	211080_s_at	211814_s_at	AF112857	CCNE2	0.861387	7.655706e-26	3.539539e-21	2.528242e-22
15	211080_s_at	221268_s_at	NM_030791	SGPP1	0.860767	9.073589e-26	4.195083e-21	2.796722e-22
16	211080_s_at	205884_at	NM_000885	ITGA4	0.858619	1.625216e-25	7.514023e-21	4.696264e-22
17	211080_s_at	225140_at	BF438116	KLF3	0.857754	2.049830e-25	9.477186e-21	5.574815e-22
18	211080_s_at	219869_s_at	NM_022154	SLC39A8	0.856608	2.780499e-25	1.285536e-20	7.141867e-22
19	211080_s_at	215707_s_at	AV725328	PRNP	0.856508	2.855371e-25	1.320152e-20	6.948170e-22
20	211080_s_at	222393_s_at	AU149868	NAA50	0.855776	3.463789e-25	1.601448e-20	8.007242e-22
21	211080_s_at	203676_at	NM_002076	GNS	0.854219	5.206790e-25	2.407307e-20	1.146337e-21
22	211080_s_at	211090_s_at	Z25435	PRPF4B	0.853422	6.403307e-25	2.960505e-20	1.345684e-21
23	211080_s_at	210178_x_at	AF047448	SRSF10	0.852763	7.589590e-25	3.508971e-20	1.525640e-21
24	211080_s_at	200806_s_at	BE256479	HSPD1	0.852728	7.658943e-25	3.541036e-20	1.475432e-21
25	211080_s_at	217777_s_at	NM_016395	PTPLAD1	0.852406	8.320115e-25	3.846722e-20	1.538689e-21
26	211080_s_at	200776_s_at	AL518328		0.852002	9.228883e-25	4.266882e-20	1.641108e-21
27	211080_s_at	1554508_at	BC029917	PIK3AP1	0.851080	1.167642e-24	5.398475e-20	1.999435e-21
28	211080_s_at	206113_s_at	NM_004162	RAB5A	0.850695	1.287647e-24	5.953306e-20	2.126181e-21
29	211080_s_at	222697_s_at	AI521709	ABHD10	0.850270	1.433919e-24	6.629580e-20	2.286062e-21
30	211080_s_at	209055_s_at	AW268817	CDC5L	0.850077	1.505345e-24	6.959813e-20	2.319938e-21
31	211080_s_at	205885_s_at	L12002	ITGA4	0.847167	3.114349e-24	1.439888e-19	4.644800e-21
32	211080_s_at	201823_s_at	NM_004290	RNF14	0.847155	3.124076e-24	1.444385e-19	4.513704e-21
33	211080_s_at	221194_s_at	NM_016125	RNFT1	0.846442	3.723655e-24	1.721595e-19	5.216954e-21
34	211080_s_at	211559_s_at	L49506	CCNG2	0.846084	4.066474e-24	1.880093e-19	5.529687e-21
35	211080_s_at	203134_at	NM_007166	PICALM	0.846070	4.079946e-24	1.886322e-19	5.389493e-21
36	211080_s_at	1555797_a_at	AF017807	ARPC5	0.845930	4.223029e-24	1.952475e-19	5.423542e-21
37	211080_s_at	201504_s_at	AI435302	TSN	0.845756	4.406729e-24	2.037407e-19	5.506506e-21
38	211080_s_at	220386_s_at	NM_019063	EML4	0.843949	6.838603e-24	3.161760e-19	8.320421e-21
39	211080_s_at	1553685_s_at	NM_138473	SP1	0.842964	8.669292e-24	4.008161e-19	1.027734e-20
40	211080_s_at	231918_s_at	AK025314	GFM2	0.842598	9.464252e-24	4.375702e-19	1.093926e-20
41	211080_s_at	200008_s_at	D13988	GDI2	0.841773	1.152425e-23	5.328120e-19	1.299541e-20
42	211080_s_at	224311_s_at	AF151824	CAB39	0.841394	1.261022e-23	5.830211e-19	1.388145e-20
43	211080_s_at	211450_s_at	D89646	MSH6	0.840578	1.529645e-23	7.072161e-19	1.644689e-20
44	211080_s_at	1554441_a_at	AF479418	WAPAL	0.840099	1.712572e-23	7.917903e-19	1.799524e-20
45	211080_s_at	211825_s_at	AF327066		0.839981	1.760660e-23	8.140237e-19	1.808941e-20
46	211080_s_at	201337_s_at	NM_004781	VAMP3	0.839925	1.784180e-23	8.248978e-19	1.793256e-20
47	211080_s_at	222699_s_at	BF439250	PLEKHF2	0.839567	1.940464e-23	8.971542e-19	1.908839e-20
48	211080_s_at	233878_s_at	BE536170	XRN2	0.839293	2.069070e-23	9.566136e-19	1.992945e-20
49	211080_s_at	209363_s_at	U46837	MED21	0.838467	2.508654e-23	1.159851e-18	2.367043e-20
50	211080_s_at	1555814_a_at	AF498970	RHOA	0.837721	2.982885e-23	1.379107e-18	2.758214e-20

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation