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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 5 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
3172	202215_s_at	NM_014223	NFYC		nuclear transcription factor Y, gamma
3173	202216_x_at	BC005003	NFYC		nuclear transcription factor Y, gamma
8027	211251_x_at	U78774	NFYC		nuclear transcription factor Y, gamma
8241	211797_s_at	U62296	NFYC		nuclear transcription factor Y, gamma
20623	238231_at	AV700263	NFYC		nuclear transcription factor Y, gamma

Fetching correlation data, please wait...
Getting list of correlations for id 3172.
Getting list of p-values for id 3172.
1 of 5 done.
Getting list of correlations for id 3173.
Getting list of p-values for id 3173.
2 of 5 done.
Getting list of correlations for id 8027.
Getting list of p-values for id 8027.
3 of 5 done.
Getting list of correlations for id 8241.
Getting list of p-values for id 8241.
4 of 5 done.
Getting list of correlations for id 20623.
Getting list of p-values for id 20623.
5 of 5 done.
Calculating corrections for multiple testing (n=115585), please wait...
Done; whole program took 0.496 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	211251_x_at	202216_x_at	BC005003	NFYC	0.873654	2.213203e-27	2.558131e-22	2.558131e-22
2	202216_x_at	211251_x_at	U78774	NFYC	0.873654	2.213203e-27	2.558131e-22	1.279066e-22
3	211797_s_at	200744_s_at	AI741124	GNB1	0.859986	1.122951e-25	1.297963e-20	4.326545e-21
4	202216_x_at	201950_x_at	NM_004930	CAPZB	0.856797	2.644443e-25	3.056580e-20	7.641449e-21
5	211251_x_at	202736_s_at	AA112507	LSM4	0.852990	7.159859e-25	8.275723e-20	1.655145e-20
6	211251_x_at	201950_x_at	NM_004930	CAPZB	0.846304	3.852387e-24	4.452782e-19	7.421303e-20
7	211797_s_at	202216_x_at	BC005003	NFYC	0.843821	7.052446e-24	8.151570e-19	1.164510e-19
8	202216_x_at	211797_s_at	U62296	NFYC	0.843821	7.052446e-24	8.151570e-19	1.018946e-19
9	211251_x_at	201401_s_at	M80776	ADRBK1	0.843505	7.611402e-24	8.797638e-19	9.775154e-20
10	211797_s_at	201950_x_at	NM_004930	CAPZB	0.841992	1.093723e-23	1.264180e-18	1.264180e-19
11	211797_s_at	211251_x_at	U78774	NFYC	0.841232	1.310505e-23	1.514747e-18	1.377043e-19
12	211251_x_at	211797_s_at	U62296	NFYC	0.841232	1.310505e-23	1.514747e-18	1.262289e-19
13	211797_s_at	200900_s_at	AI583537	M6PR	0.836668	3.802927e-23	4.395613e-18	3.381241e-19
14	211251_x_at	201378_s_at	NM_014847	UBAP2L	0.830099	1.666340e-22	1.926039e-17	1.375742e-18
15	211797_s_at	211102_s_at	U82277	LILRA2	0.822398	8.707817e-22	1.006493e-16	6.709953e-18
16	211797_s_at	212194_s_at	AI418892	TM9SF4	0.818688	1.877839e-21	2.170500e-16	1.356562e-17
17	211251_x_at	200695_at	NM_014225	PPP2R1A	0.818382	1.999300e-21	2.310891e-16	1.359348e-17
18	202216_x_at	202736_s_at	AA112507	LSM4	0.816952	2.674554e-21	3.091384e-16	1.717435e-17
19	202216_x_at	201079_at	NM_004710	SYNGR2	0.816317	3.040800e-21	3.514708e-16	1.849846e-17
20	202216_x_at	222977_at	AL518882	SURF4	0.815495	3.588005e-21	4.147196e-16	2.073598e-17
21	211251_x_at	225208_s_at	AW575350	FAM103A1	0.815044	3.927735e-21	4.539872e-16	2.161844e-17
22	211251_x_at	210470_x_at	BC003129	NONO	0.811783	7.498353e-21	8.666971e-16	3.939532e-17
23	211797_s_at	212016_s_at	AA679988	PTBP1	0.808904	1.313735e-20	1.518480e-15	6.602088e-17
24	202216_x_at	201401_s_at	M80776	ADRBK1	0.808129	1.525243e-20	1.762952e-15	7.345635e-17
25	202216_x_at	201378_s_at	NM_014847	UBAP2L	0.807943	1.580661e-20	1.827007e-15	7.308030e-17
26	202216_x_at	225208_s_at	AW575350	FAM103A1	0.806271	2.175411e-20	2.514449e-15	9.670958e-17
27	211797_s_at	209853_s_at	BC002684	PSME3	0.805961	2.307665e-20	2.667315e-15	9.878945e-17
28	211797_s_at	225208_s_at	AW575350	FAM103A1	0.804201	3.217366e-20	3.718792e-15	1.328140e-16
29	211797_s_at	201401_s_at	M80776	ADRBK1	0.803589	3.608652e-20	4.171060e-15	1.438297e-16
30	211251_x_at	203109_at	NM_003969	UBE2M	0.801604	5.222036e-20	6.035890e-15	2.011963e-16
31	211251_x_at	210125_s_at	AF044773	BANF1	0.800715	6.152562e-20	7.111439e-15	2.294012e-16
32	202216_x_at	200695_at	NM_014225	PPP2R1A	0.800178	6.791339e-20	7.849769e-15	2.453053e-16
33	211797_s_at	208967_s_at	U39945	AK2	0.800177	6.792439e-20	7.851040e-15	2.379103e-16
34	211797_s_at	211299_s_at	BC003683	FLOT2	0.799991	7.028677e-20	8.124096e-15	2.389440e-16
35	211251_x_at	AFFX-HSAC07/X00351_M_at	AFFX-HSAC07/X00351_M	ACTB	0.798302	9.567734e-20	1.105887e-14	3.159676e-16
36	211251_x_at	211672_s_at	AF019888		0.798170	9.799059e-20	1.132624e-14	3.146178e-16
37	211797_s_at	1564494_s_at	AK075503	P4HB	0.798110	9.905902e-20	1.144974e-14	3.094523e-16
38	211797_s_at	209463_s_at	D50544	TAF12	0.797720	1.063252e-19	1.228960e-14	3.234104e-16
39	211797_s_at	242520_s_at	AW511110	C1orf228	0.796977	1.215971e-19	1.405480e-14	3.603794e-16
40	202215_s_at	224504_s_at	BC006350	BUD13	0.796932	1.225847e-19	1.416896e-14	3.542239e-16
41	211251_x_at	211136_s_at	BC004865	CLPTM1	0.795133	1.692911e-19	1.956751e-14	4.772564e-16
42	202216_x_at	203109_at	NM_003969	UBE2M	0.794740	1.815738e-19	2.098721e-14	4.996954e-16
43	211797_s_at	202736_s_at	AA112507	LSM4	0.794410	1.925525e-19	2.225618e-14	5.175856e-16
44	202216_x_at	216194_s_at	AD001527	TBCB	0.793867	2.120363e-19	2.450822e-14	5.570050e-16
45	202215_s_at	229101_at	AI963142	LOC150166	0.793832	2.133617e-19	2.466141e-14	5.480313e-16
46	211797_s_at	200987_x_at	AA758755	PSME3	0.792032	2.930530e-19	3.387254e-14	7.363595e-16
47	202215_s_at	225196_s_at	AF308301	MRPS26	0.790908	3.567804e-19	4.123846e-14	8.774141e-16
48	211251_x_at	1564494_s_at	AK075503	P4HB	0.790678	3.713438e-19	4.292177e-14	8.942035e-16
49	202216_x_at	210125_s_at	AF044773	BANF1	0.790629	3.745461e-19	4.329191e-14	8.835084e-16
50	211797_s_at	216111_x_at	U38979	PMS2L3	0.789425	4.616104e-19	5.335524e-14	1.067105e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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