[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4189	203446_s_at	NM_000276	OCRL		oculocerebrorenal syndrome of Lowe
6400	208316_s_at	M88162	OCRL		oculocerebrorenal syndrome of Lowe

Fetching correlation data, please wait...
Getting list of correlations for id 4189.
Getting list of p-values for id 4189.
1 of 2 done.
Getting list of correlations for id 6400.
Getting list of p-values for id 6400.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.216 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208316_s_at	200796_s_at	BF594446	MCL1	0.819277	1.664243e-21	7.694459e-17	7.694459e-17
2	208316_s_at	1559954_s_at	AF147429	DDX42	0.781250	1.841867e-18	8.515686e-14	4.257843e-14
3	208316_s_at	214971_s_at	AV695711	ST6GAL1	0.776818	3.805609e-18	1.759485e-13	5.864951e-14
4	208316_s_at	1558015_s_at	BU175810	ACTR2	0.771559	8.815245e-18	4.075640e-13	1.018910e-13
5	208316_s_at	1557910_at	BG612458	HSP90AB1	0.770691	1.010400e-17	4.671483e-13	9.342967e-14
6	208316_s_at	224046_s_at	U67932	PDE7A	0.767526	1.653638e-17	7.645428e-13	1.274238e-13
7	208316_s_at	209055_s_at	AW268817	CDC5L	0.762164	3.743450e-17	1.730747e-12	2.472495e-13
8	208316_s_at	210449_x_at	AF100544	MAPK14	0.759973	5.195392e-17	2.402038e-12	3.002547e-13
9	208316_s_at	211547_s_at	L13387	PAFAH1B1	0.758420	6.540466e-17	3.023919e-12	3.359910e-13
10	208316_s_at	1555229_a_at	BC007010	C1S	0.758100	6.856296e-17	3.169940e-12	3.169940e-13
11	208316_s_at	214544_s_at	NM_003825	SNAP23	0.757706	7.265629e-17	3.359191e-12	3.053810e-13
12	208316_s_at	214336_s_at	AI621079	COPA	0.757439	7.557354e-17	3.494067e-12	2.911723e-13
13	208316_s_at	213022_s_at	NM_007124	UTRN	0.754837	1.105150e-16	5.109550e-12	3.930423e-13
14	208316_s_at	200806_s_at	BE256479	HSPD1	0.754224	1.207795e-16	5.584118e-12	3.988656e-13
15	208316_s_at	211561_x_at	L35253	MAPK14	0.753501	1.340699e-16	6.198590e-12	4.132393e-13
16	208316_s_at	204006_s_at	NM_000570		0.752730	1.498211e-16	6.926830e-12	4.329269e-13
17	208316_s_at	206113_s_at	NM_004162	RAB5A	0.751450	1.799711e-16	8.320785e-12	4.894580e-13
18	208316_s_at	210892_s_at	BC004472	GTF2I	0.750095	2.182528e-16	1.009070e-11	5.605943e-13
19	208316_s_at	215236_s_at	AV721177	PICALM	0.749782	2.281574e-16	1.054863e-11	5.551910e-13
20	208316_s_at	216985_s_at	AJ002077	STX3	0.742574	6.229055e-16	2.879941e-11	1.439971e-12
21	208316_s_at	200751_s_at	BE898861	HNRNPC	0.740275	8.521644e-16	3.939897e-11	1.876141e-12
22	208316_s_at	220386_s_at	NM_019063	EML4	0.737880	1.177030e-15	5.441883e-11	2.473583e-12
23	208316_s_at	1555797_a_at	AF017807	ARPC5	0.737224	1.285256e-15	5.942255e-11	2.583589e-12
24	208316_s_at	215739_s_at	AJ003062	TUBGCP3	0.734450	1.858153e-15	8.590985e-11	3.579577e-12
25	208316_s_at	221060_s_at	NM_003266	TLR4	0.728501	4.034224e-15	1.865183e-10	7.460733e-12
26	208316_s_at	202765_s_at	AI264196	FBN1	0.728209	4.188523e-15	1.936522e-10	7.448161e-12
27	208316_s_at	201383_s_at	AL044170	NBR1	0.726027	5.536042e-15	2.559534e-10	9.479755e-12
28	208316_s_at	209895_at	AF119855	PTPN11	0.725064	6.256349e-15	2.892560e-10	1.033057e-11
29	208316_s_at	202444_s_at	NM_006459	ERLIN1	0.724989	6.315793e-15	2.920044e-10	1.006912e-11
30	208316_s_at	1559883_s_at	AF147427	SAMHD1	0.724982	6.321189e-15	2.922538e-10	9.741795e-12
31	208316_s_at	224311_s_at	AF151824	CAB39	0.724877	6.405680e-15	2.961602e-10	9.553555e-12
32	208316_s_at	238434_at	AW207575	SMCR8	0.724244	6.939828e-15	3.208560e-10	1.002675e-11
33	208316_s_at	1554747_a_at	BC033559	SEPT2	0.723041	8.073878e-15	3.732877e-10	1.131175e-11
34	208316_s_at	220363_s_at	NM_022086	ELMO2	0.722076	9.112256e-15	4.212960e-10	1.239106e-11
35	208316_s_at	211212_s_at	AF081459	ORC5L	0.721472	9.825850e-15	4.542883e-10	1.297967e-11
36	208316_s_at	215719_x_at	X83493	FAS	0.721288	1.005388e-14	4.648310e-10	1.291197e-11
37	208316_s_at	200813_s_at	BE256969	PAFAH1B1	0.720886	1.056958e-14	4.886738e-10	1.320740e-11
38	208316_s_at	212162_at	AK022873	KIDINS220	0.719445	1.263859e-14	5.843326e-10	1.537717e-11
39	208316_s_at	201120_s_at	AL547946	PGRMC1	0.719117	1.316027e-14	6.084519e-10	1.560133e-11
40	208316_s_at	1558093_s_at	BI832461	MATR3	0.718304	1.454679e-14	6.725561e-10	1.681390e-11
41	208316_s_at	219868_s_at	NM_016376	ANKFY1	0.717381	1.629360e-14	7.533182e-10	1.837361e-11
42	208316_s_at	207782_s_at	NM_007319	PSEN1	0.716740	1.762166e-14	8.147200e-10	1.939810e-11
43	208316_s_at	233230_s_at	AV723459	SLAIN2	0.716530	1.808048e-14	8.359328e-10	1.944030e-11
44	208316_s_at	201718_s_at	BF511685	EPB41L2	0.716362	1.845389e-14	8.531969e-10	1.939084e-11
45	208316_s_at	201337_s_at	NM_004781	VAMP3	0.716319	1.855150e-14	8.577101e-10	1.906023e-11
46	208316_s_at	220566_at	NM_014308	PIK3R5	0.716177	1.887685e-14	8.727522e-10	1.897287e-11
47	208316_s_at	215832_x_at	AV722190	PICALM	0.714424	2.335290e-14	1.079698e-9	2.297230e-11
48	208316_s_at	212595_s_at	AL534321	DAZAP2	0.709864	4.033635e-14	1.864911e-9	3.885231e-11
49	208316_s_at	214959_s_at	AF229253	API5	0.709826	4.051508e-14	1.873174e-9	3.822804e-11
50	208316_s_at	238320_at	AV659198	NEAT1	0.708864	4.540288e-14	2.099157e-9	4.198313e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation