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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 4 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
15105	224940_s_at	BF107618	PAPPA		pregnancy-associated plasma protein A, pappalysin 1
15106	224941_at	BF107618	PAPPA		pregnancy-associated plasma protein A, pappalysin 1
15107	224942_at	BG434272	PAPPA		pregnancy-associated plasma protein A, pappalysin 1
17489	228128_x_at	AI110886	PAPPA		pregnancy-associated plasma protein A, pappalysin 1

Fetching correlation data, please wait...
Getting list of correlations for id 15105.
Getting list of p-values for id 15105.
1 of 4 done.
Getting list of correlations for id 15106.
Getting list of p-values for id 15106.
2 of 4 done.
Getting list of correlations for id 15107.
Getting list of p-values for id 15107.
3 of 4 done.
Getting list of correlations for id 17489.
Getting list of p-values for id 17489.
4 of 4 done.
Calculating corrections for multiple testing (n=92468), please wait...
Done; whole program took 0.345 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	224940_s_at	224941_at	BF107618	PAPPA	0.911392	2.316009e-33	2.141567e-28	2.141567e-28
2	224941_at	224940_s_at	BF107618	PAPPA	0.911392	2.316009e-33	2.141567e-28	1.070784e-28
3	224941_at	228128_x_at	AI110886	PAPPA	0.904925	3.644837e-32	3.370308e-27	1.123436e-27
4	228128_x_at	224941_at	BF107618	PAPPA	0.904925	3.644837e-32	3.370308e-27	8.425770e-28
5	228128_x_at	224940_s_at	BF107618	PAPPA	0.889159	1.422773e-29	1.315610e-24	2.631219e-25
6	224940_s_at	228128_x_at	AI110886	PAPPA	0.889159	1.422773e-29	1.315610e-24	2.192683e-25
7	224940_s_at	209170_s_at	AF016004	GPM6B	0.789563	4.507119e-19	4.167643e-14	5.953775e-15
8	224941_at	209894_at	U50748	LEPR	0.771537	8.845888e-18	8.179616e-13	1.022452e-13
9	224941_at	213258_at	BF511231	TFPI	0.767344	1.700625e-17	1.572534e-12	1.747260e-13
10	224941_at	209170_s_at	AF016004	GPM6B	0.759286	5.753231e-17	5.319898e-12	5.319898e-13
11	224941_at	212230_at	AV725664	PPAP2B	0.757642	7.335197e-17	6.782710e-12	6.166100e-13
12	224941_at	213070_at	AV682436	PIK3C2A	0.743860	5.219898e-16	4.826735e-11	4.022279e-12
13	228128_x_at	209894_at	U50748	LEPR	0.740770	7.968110e-16	7.367952e-11	5.667655e-12
14	224940_s_at	1552519_at	NM_145259	ACVR1C	0.740275	8.521576e-16	7.879731e-11	5.628380e-12
15	224941_at	218901_at	NM_020353	PLSCR4	0.726887	4.961171e-15	4.587496e-10	3.058331e-11
16	224941_at	204112_s_at	NM_006895	HNMT	0.723269	7.846275e-15	7.255294e-10	4.534558e-11
17	228128_x_at	204112_s_at	NM_006895	HNMT	0.720581	1.097778e-14	1.015093e-9	5.971138e-11
18	228128_x_at	209170_s_at	AF016004	GPM6B	0.713581	2.585663e-14	2.390911e-9	1.328284e-10
19	224941_at	202609_at	NM_004447	EPS8	0.712708	2.871971e-14	2.655654e-9	1.397713e-10
20	224940_s_at	209894_at	U50748	LEPR	0.709520	4.201220e-14	3.884784e-9	1.942392e-10
21	224940_s_at	209763_at	AL049176	CHRDL1	0.708430	4.779191e-14	4.419222e-9	2.104392e-10
22	224941_at	222410_s_at	AF121856	SNX6	0.706367	6.090102e-14	5.631395e-9	2.559725e-10
23	224941_at	225785_at	BG112359	REEP3	0.701785	1.035434e-13	9.574452e-9	4.162805e-10
24	224941_at	201121_s_at	NM_006667	PGRMC1	0.700231	1.236872e-13	1.143711e-8	4.765463e-10
25	228128_x_at	213258_at	BF511231	TFPI	0.698427	1.518197e-13	1.403847e-8	5.615387e-10
26	224941_at	209687_at	U19495	CXCL12	0.697933	1.605371e-13	1.484455e-8	5.709441e-10
27	224940_s_at	213258_at	BF511231	TFPI	0.697867	1.617448e-13	1.495622e-8	5.539340e-10
28	224941_at	201780_s_at	NM_007282	RNF13	0.694718	2.302853e-13	2.129402e-8	7.605007e-10
29	228128_x_at	209687_at	U19495	CXCL12	0.694367	2.394759e-13	2.214386e-8	7.635815e-10
30	224941_at	222209_s_at	AK000684	TMEM135	0.692340	2.997934e-13	2.772129e-8	9.240431e-10
31	224941_at	203414_at	NM_012329	MMD	0.691205	3.397564e-13	3.141659e-8	1.013438e-9
32	228128_x_at	205498_at	NM_000163	GHR	0.690601	3.630144e-13	3.356722e-8	1.048976e-9
33	228128_x_at	204591_at	NM_006614	CHL1	0.687447	5.119197e-13	4.733619e-8	1.434430e-9
34	224941_at	226867_at	AI758191	DENND4C	0.686225	5.840873e-13	5.400938e-8	1.588511e-9
35	228128_x_at	209763_at	AL049176	CHRDL1	0.684275	7.200696e-13	6.658340e-8	1.902383e-9
36	224940_s_at	205609_at	NM_001146	ANGPT1	0.680868	1.034019e-12	9.561366e-8	2.655935e-9
37	224941_at	225897_at	AI709406	MARCKS	0.679618	1.179365e-12	1.090535e-7	2.947393e-9
38	224941_at	240046_at	BE217890		0.677825	1.422523e-12	1.315379e-7	3.461524e-9
39	228128_x_at	212230_at	AV725664	PPAP2B	0.676810	1.581029e-12	1.461946e-7	3.748580e-9
40	228128_x_at	209108_at	AF053453	TSPAN6	0.676587	1.618042e-12	1.496171e-7	3.740427e-9
41	228128_x_at	215001_s_at	AL161952	GLUL	0.674238	2.062131e-12	1.906811e-7	4.650758e-9
42	228128_x_at	222209_s_at	AK000684	TMEM135	0.672673	2.420784e-12	2.238450e-7	5.329643e-9
43	224941_at	233849_s_at	AK023014	ARHGAP5	0.672103	2.565920e-12	2.372655e-7	5.517802e-9
44	224941_at	217886_at	BF213575	EPS15	0.671557	2.712551e-12	2.508242e-7	5.700550e-9
45	224941_at	201427_s_at	NM_005410	SEPP1	0.671543	2.716230e-12	2.511643e-7	5.581430e-9
46	224941_at	209763_at	AL049176	CHRDL1	0.670324	3.074033e-12	2.842497e-7	6.179341e-9
47	224941_at	205498_at	NM_000163	GHR	0.670105	3.142806e-12	2.906090e-7	6.183169e-9
48	224940_s_at	209167_at	AI419030	GPM6B	0.664300	5.617205e-12	5.194117e-7	1.082108e-8
49	228128_x_at	202609_at	NM_004447	EPS8	0.663864	5.864606e-12	5.422883e-7	1.106711e-8
50	224941_at	204042_at	AB020707	WASF3	0.663117	6.313249e-12	5.837735e-7	1.167547e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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