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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
11878	218679_s_at	NM_016208	VPS28		vacuolar protein sorting 28 homolog (S. cerevisiae)

Fetching correlation data, please wait...
Getting list of correlations for id 11878.
Getting list of p-values for id 11878.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.168 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	218679_s_at	202996_at	NM_021173	POLD4	0.812709	6.248599e-21	1.444489e-16	1.444489e-16
2	218679_s_at	200747_s_at	NM_006185	NUMA1	0.779090	2.628766e-18	6.076918e-14	3.038459e-14
3	218679_s_at	200846_s_at	NM_002708	PPP1CA	0.775793	4.490924e-18	1.038167e-13	3.460556e-14
4	218679_s_at	201717_at	NM_004927	MRPL49	0.766482	1.941973e-17	4.489260e-13	1.122315e-13
5	218679_s_at	200852_x_at	NM_005273	GNB2	0.758315	6.641866e-17	1.535400e-12	3.070800e-13
6	218679_s_at	210859_x_at	AF077973	CLN3	0.752100	1.639776e-16	3.790671e-12	6.317785e-13
7	218679_s_at	202592_at	NM_001487	BLOC1S1	0.748864	2.597987e-16	6.005766e-12	8.579666e-13
8	218679_s_at	219988_s_at	NM_018150	RNF220	0.747488	3.152530e-16	7.287705e-12	9.109631e-13
9	218679_s_at	216071_x_at	AF132033	MED12	0.744896	4.524044e-16	1.045823e-11	1.162026e-12
10	218679_s_at	201234_at	NM_004517	ILK	0.739734	9.169663e-16	2.119751e-11	2.119751e-12
11	218679_s_at	214736_s_at	BE898639	ADD1	0.735358	1.647825e-15	3.809276e-11	3.462978e-12
12	218679_s_at	210417_s_at	U81802	PI4KB	0.734984	1.731534e-15	4.002788e-11	3.335657e-12
13	218679_s_at	210428_s_at	AF260566	HGS	0.733433	2.124614e-15	4.911470e-11	3.778054e-12
14	218679_s_at	206491_s_at	NM_003827	NAPA	0.732297	2.465643e-15	5.699828e-11	4.071306e-12
15	218679_s_at	212015_x_at	BF690062	PTBP1	0.727703	4.469603e-15	1.033238e-10	6.888255e-12
16	218679_s_at	205423_at	NM_001127	AP1B1	0.727549	4.558525e-15	1.053794e-10	6.586214e-12
17	218679_s_at	211342_x_at	BC004354	MED12	0.727319	4.695062e-15	1.085357e-10	6.384456e-12
18	218679_s_at	203506_s_at	NM_005120	MED12	0.725497	5.921945e-15	1.368976e-10	7.605422e-12
19	218679_s_at	201050_at	NM_012268	PLD3	0.724157	7.015766e-15	1.621835e-10	8.535971e-12
20	218679_s_at	201600_at	NM_007273	PHB2	0.721427	9.880673e-15	2.284115e-10	1.142058e-11
21	218679_s_at	208818_s_at	BC000419	COMT	0.721012	1.040527e-14	2.405386e-10	1.145422e-11
22	218679_s_at	202014_at	NM_014330	PPP1R15A	0.719942	1.188463e-14	2.747370e-10	1.248805e-11
23	218679_s_at	211926_s_at	AI827941	MYH9	0.718392	1.439138e-14	3.326856e-10	1.446459e-11
24	218679_s_at	218714_at	NM_024031	PRR14	0.717516	1.602613e-14	3.704760e-10	1.543650e-11
25	218679_s_at	211271_x_at	BC004383	PTBP1	0.714319	2.365146e-14	5.467507e-10	2.187003e-11
26	218679_s_at	223009_at	BC001706	C11orf59	0.714319	2.365262e-14	5.467776e-10	2.102991e-11
27	218679_s_at	209275_s_at	AF015593	CLN3	0.714103	2.427699e-14	5.612111e-10	2.078560e-11
28	218679_s_at	209411_s_at	AW008018	GGA3	0.713564	2.590858e-14	5.989287e-10	2.139031e-11
29	218679_s_at	201755_at	NM_006739	MCM5	0.712989	2.776585e-14	6.418631e-10	2.213321e-11
30	218679_s_at	217840_at	NM_016222	DDX41	0.712124	3.080522e-14	7.121242e-10	2.373747e-11
31	218679_s_at	212359_s_at	W89120	KIAA0913	0.710616	3.688558e-14	8.526841e-10	2.750594e-11
32	218679_s_at	209219_at	L03411	RDBP	0.707865	5.108150e-14	1.180851e-9	3.690160e-11
33	218679_s_at	210983_s_at	AF279900	MCM7	0.705038	7.110871e-14	1.643820e-9	4.981273e-11
34	218679_s_at	201378_s_at	NM_014847	UBAP2L	0.703771	8.236708e-14	1.904080e-9	5.600235e-11
35	218679_s_at	223024_at	AL562950	AP1M1	0.703487	8.511987e-14	1.967716e-9	5.622046e-11
36	218679_s_at	212369_at	AI264312	ZNF384	0.701286	1.096454e-13	2.534672e-9	7.040755e-11
37	218679_s_at	209083_at	U34690	CORO1A	0.700874	1.149299e-13	2.656836e-9	7.180636e-11
38	218679_s_at	202471_s_at	NM_004135	IDH3G	0.700214	1.239318e-13	2.864931e-9	7.539291e-11
39	218679_s_at	201412_at	NM_014045	LRP10	0.700026	1.266086e-13	2.926812e-9	7.504645e-11
40	218679_s_at	200611_s_at	AB010427	WDR1	0.700001	1.269767e-13	2.935320e-9	7.338300e-11
41	218679_s_at	202140_s_at	NM_003992	CLK3	0.699758	1.305280e-13	3.017415e-9	7.359550e-11
42	218679_s_at	224622_at	AB037743	TBC1D14	0.698122	1.571495e-13	3.632825e-9	8.649584e-11
43	218679_s_at	225294_s_at	BG340967	TRAPPC1	0.696044	1.985527e-13	4.589943e-9	1.067429e-10
44	218679_s_at	201716_at	NM_003099	SNX1	0.695887	2.020737e-13	4.671338e-9	1.061668e-10
45	218679_s_at	201350_at	NM_004475	FLOT2	0.695711	2.061066e-13	4.764565e-9	1.058792e-10
46	218679_s_at	205740_s_at	NM_024321	RBM42	0.695678	2.068743e-13	4.782314e-9	1.039633e-10
47	218679_s_at	216032_s_at	AF091085	ERGIC3	0.693132	2.746821e-13	6.349825e-9	1.351027e-10
48	218679_s_at	200000_s_at	NM_006445	PRPF8	0.692815	2.844756e-13	6.576223e-9	1.370047e-10
49	218679_s_at	228009_x_at	NM_014596	ZNRD1	0.690529	3.659089e-13	8.458716e-9	1.726269e-10
50	218679_s_at	225431_x_at	BE779764	PM20D2	-0.690509	3.667098e-13	8.477229e-9	1.695446e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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