[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6258	207815_at	NM_002620	PF4V1		platelet factor 4 variant 1

Fetching correlation data, please wait...
Getting list of correlations for id 6258.
Getting list of p-values for id 6258.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.114 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	207815_at	242094_at	AI949266		0.548497	6.616612e-8	1.529562e-3	1.529562e-3
2	207815_at	222717_at	BF982174	SDPR	0.541831	1.022643e-7	2.364044e-3	1.182022e-3
3	207815_at	214146_s_at	R64130	PPBP	0.523494	3.230745e-7	7.468513e-3	2.489504e-3
4	207815_at	204993_at	NM_002073	GNAZ	0.521288	3.693431e-7	8.538105e-3	2.134526e-3
5	207815_at	216060_s_at	AK021890	DAAM1	0.500861	1.221071e-6	2.822750e-2	5.645500e-3
6	207815_at	206382_s_at	NM_001709	BDNF	0.496783	1.536227e-6	3.551297e-2	5.918828e-3
7	207815_at	207926_at	NM_004488	GP5	0.496524	1.558617e-6	3.603055e-2	5.147222e-3
8	207815_at	220336_s_at	AB043821	GP6	0.496207	1.586439e-6	3.667372e-2	4.584215e-3
9	207815_at	203305_at	NM_000129	F13A1	0.494722	1.723199e-6	3.983518e-2	4.426132e-3
10	207815_at	207206_s_at	NM_000697	ALOX12	0.488479	2.429555e-6	5.616403e-2	5.616403e-3
11	207815_at	231341_at	BE670584	SLC35D3	0.485722	2.821425e-6	6.522287e-2	5.929352e-3
12	207815_at	225085_at	AA522888	USP40	-0.481689	3.503307e-6	8.098594e-2	6.748828e-3
13	207815_at	228708_at	BF438386	RAB27B	0.481566	3.526337e-6	8.151834e-2	6.270641e-3
14	207815_at	201718_s_at	BF511685	EPB41L2	-0.475483	4.861979e-6	1.123944e-1	8.028169e-3
15	207815_at	224665_at	BE874771	ANAPC16	-0.475019	4.981319e-6	1.151532e-1	7.676877e-3
16	207815_at	209839_at	AL136712	DNM3	0.474866	5.021199e-6	1.160751e-1	7.254691e-3
17	207815_at	222892_s_at	AI087937	TMEM40	0.473050	5.518810e-6	1.275783e-1	7.504608e-3
18	207815_at	57588_at	R62432	SLC24A3	0.469748	6.544731e-6	1.512945e-1	8.405253e-3
19	207815_at	211902_x_at	L34703		-0.468482	6.983717e-6	1.614426e-1	8.496979e-3
20	207815_at	206390_x_at	NM_002619	PF4	0.465188	8.258155e-6	1.909038e-1	9.545188e-3
21	207815_at	232537_x_at	AU159474	MARK3	0.461138	1.012460e-5	2.340503e-1	1.114525e-2
22	207815_at	204233_s_at	AI991328	CHKA	-0.460152	1.063535e-5	2.458573e-1	1.117533e-2
23	207815_at	215524_x_at	AW966434		-0.456320	1.285839e-5	2.972475e-1	1.292380e-2
24	207815_at	220496_at	NM_016509	CLEC1B	0.455612	1.331418e-5	3.077840e-1	1.282433e-2
25	207815_at	210972_x_at	M15565		-0.455520	1.337485e-5	3.091864e-1	1.236746e-2
26	207815_at	201010_s_at	NM_006472	TXNIP	-0.453410	1.483000e-5	3.428251e-1	1.318558e-2
27	207815_at	208309_s_at	NM_006785	MALT1	-0.451637	1.616647e-5	3.737203e-1	1.384149e-2
28	207815_at	213483_at	AK025679	PPWD1	-0.451321	1.641633e-5	3.794963e-1	1.355344e-2
29	207815_at	213478_at	AB028949	KAZ	0.450455	1.711882e-5	3.957358e-1	1.364606e-2
30	207815_at	209992_at	AB044805	PFKFB2	-0.449712	1.774422e-5	4.101931e-1	1.367310e-2
31	207815_at	228507_at	AI742043		0.449419	1.799673e-5	4.160304e-1	1.342034e-2
32	207815_at	201620_at	NM_003791	MBTPS1	-0.448060	1.921194e-5	4.441225e-1	1.387883e-2
33	207815_at	1555858_at	CA430188	LOC440944	-0.447480	1.975388e-5	4.566505e-1	1.383790e-2
34	207815_at	226761_at	BF940979	IKZF4	0.446288	2.091152e-5	4.834117e-1	1.421799e-2
35	207815_at	208771_s_at	J02959	LTA4H	-0.442360	2.519430e-5	5.824167e-1	1.664048e-2
36	207815_at	221643_s_at	AF016005	RERE	-0.440015	2.812748e-5	6.502229e-1	1.806175e-2
37	207815_at	209671_x_at	M12423		-0.438683	2.993175e-5	6.919324e-1	1.870087e-2
38	207815_at	206493_at	NM_000419	ITGA2B	0.438530	3.014516e-5	6.968657e-1	1.833857e-2
39	207815_at	203817_at	W93728	GUCY1B3	0.436817	3.264224e-5	7.545906e-1	1.934848e-2
40	207815_at	205442_at	NM_021647	MFAP3L	0.433326	3.833859e-5	8.862732e-1	2.215683e-2
41	207815_at	226391_at	AW271788		-0.432750	3.936246e-5	9.099421e-1	2.219371e-2
42	207815_at	201919_at	AL049246	SLC25A36	-0.432360	4.006954e-5	9.262876e-1	2.205447e-2
43	207815_at	239577_at	AV699781		-0.432278	4.022001e-5	9.297659e-1	2.162246e-2
44	207815_at	238816_at	AW297945	PSEN1	-0.431552	4.157499e-5	9.610891e-1	2.184293e-2
45	207815_at	225793_at	AW500180	LIX1L	-0.431511	4.165295e-5	9.628912e-1	2.139758e-2
46	207815_at	218501_at	NM_019555	ARHGEF3	0.430294	4.402244e-5	1.017667e+0	2.212319e-2
47	207815_at	208897_s_at	BC003360	DDX18	-0.429475	4.568707e-5	1.056148e+0	2.247124e-2
48	207815_at	201477_s_at	NM_001033	RRM1	0.429224	4.620972e-5	1.068230e+0	2.225479e-2
49	207815_at	223066_at	BC000761	SNAPIN	-0.428904	4.688130e-5	1.083755e+0	2.211745e-2
50	207815_at	221768_at	AV705803	SFPQ	-0.428092	4.863184e-5	1.124222e+0	2.248445e-2

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation