[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
9778	213893_x_at	AA161026	PMS2L5		postmeiotic segregation increased 2-like 5

Fetching correlation data, please wait...
Getting list of correlations for id 9778.
Getting list of p-values for id 9778.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.124 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	213893_x_at	214526_x_at	NM_005394	PMS2L1	0.791762	3.072867e-19	7.103547e-15	7.103547e-15
2	213893_x_at	214756_x_at	AB017004	PMS2L1	0.787508	6.420674e-19	1.484267e-14	7.421336e-15
3	213893_x_at	215412_x_at	AB017007	PMS2L2	0.768179	1.494690e-17	3.455276e-13	1.151759e-13
4	213893_x_at	217485_x_at	D38435	PMS2L1	0.754417	1.174543e-16	2.715191e-12	6.787977e-13
5	213893_x_at	210707_x_at	U38980	PMS2L11	0.747976	2.943860e-16	6.805321e-12	1.361064e-12
6	213893_x_at	224825_at	AL050348	DNTTIP1	0.730944	2.941568e-15	6.800023e-11	1.133337e-11
7	213893_x_at	216843_x_at	U38964	PMS2L1	0.729553	3.522769e-15	8.143585e-11	1.163369e-11
8	213893_x_at	218192_at	NM_016291	IP6K2	0.720076	1.168885e-14	2.702111e-10	3.377639e-11
9	213893_x_at	215667_x_at	AI375694		0.704237	7.803540e-14	1.803944e-9	2.004382e-10
10	213893_x_at	209219_at	L03411	RDBP	0.700422	1.210292e-13	2.797831e-9	2.797831e-10
11	213893_x_at	218123_at	NM_017835	C21orf59	0.695324	2.152156e-13	4.975139e-9	4.522853e-10
12	213893_x_at	203155_at	NM_012432	SETDB1	0.694706	2.305971e-13	5.330712e-9	4.442260e-10
13	213893_x_at	216111_x_at	U38979	PMS2L3	0.693599	2.608002e-13	6.028917e-9	4.637629e-10
14	213893_x_at	213535_s_at	AA910614	UBE2I	0.688693	4.471693e-13	1.033721e-8	7.383724e-10
15	213893_x_at	224809_x_at	AK023166	TINF2	0.688594	4.519783e-13	1.044838e-8	6.965588e-10
16	213893_x_at	210386_s_at	BC001906	MTX1	0.685109	6.585647e-13	1.522404e-8	9.515024e-10
17	213893_x_at	202487_s_at	NM_012412	H2AFV	0.683485	7.834442e-13	1.811088e-8	1.065346e-9
18	213893_x_at	200786_at	NM_002799	PSMB7	0.680984	1.021393e-12	2.361154e-8	1.311752e-9
19	213893_x_at	1553978_at	BC010931	LOC729991	0.679477	1.196931e-12	2.766946e-8	1.456287e-9
20	213893_x_at	224511_s_at	BC006405	TXNDC17	0.677206	1.517262e-12	3.507454e-8	1.753727e-9
21	213893_x_at	224608_s_at	AL528911	VPS25	0.674461	2.015426e-12	4.659061e-8	2.218600e-9
22	213893_x_at	226434_at	BF000655	C7orf47	0.672244	2.529294e-12	5.846969e-8	2.657713e-9
23	213893_x_at	211715_s_at	BC005844	BDH1	0.671181	2.818046e-12	6.514478e-8	2.832382e-9
24	213893_x_at	38149_at	D29642	ARHGAP25	0.668522	3.686981e-12	8.523193e-8	3.551331e-9
25	213893_x_at	219324_at	NM_024313		0.667796	3.965843e-12	9.167840e-8	3.667136e-9
26	213893_x_at	216194_s_at	AD001527	TBCB	0.667407	4.123452e-12	9.532184e-8	3.666225e-9
27	213893_x_at	213541_s_at	AI351043	ERG	0.667379	4.134995e-12	9.558867e-8	3.540321e-9
28	213893_x_at	211383_s_at	AL136827	WDR37	0.667027	4.283209e-12	9.901493e-8	3.536248e-9
29	213893_x_at	201433_s_at	NM_014754	PTDSS1	0.663005	6.382928e-12	1.475542e-7	5.088074e-9
30	213893_x_at	217977_at	NM_016332	SEPX1	0.662701	6.576550e-12	1.520301e-7	5.067670e-9
31	213893_x_at	203919_at	NM_003195	TCEA2	0.662156	6.938288e-12	1.603924e-7	5.173948e-9
32	213893_x_at	209083_at	U34690	CORO1A	0.661639	7.298981e-12	1.687306e-7	5.272830e-9
33	213893_x_at	202659_at	NM_002801	PSMB10	0.661617	7.314886e-12	1.690982e-7	5.124189e-9
34	213893_x_at	208968_s_at	BC002568	CIAPIN1	0.661442	7.441190e-12	1.720180e-7	5.059353e-9
35	213893_x_at	225337_at	AI346910	ABHD2	0.659410	9.071486e-12	2.097056e-7	5.991587e-9
36	213893_x_at	224248_x_at	AF271785	FAM192A	0.659381	9.097337e-12	2.103031e-7	5.841754e-9
37	213893_x_at	227983_at	AI810244	RILPL2	0.658251	1.014935e-11	2.346224e-7	6.341147e-9
38	213893_x_at	227516_at	AI655996	SF3A1	0.657782	1.062060e-11	2.455164e-7	6.460957e-9
39	213893_x_at	201863_at	NM_014077	FAM32A	0.656950	1.150630e-11	2.659912e-7	6.820286e-9
40	213893_x_at	214473_x_at	NM_005395	PMS2L3	0.656912	1.154933e-11	2.669858e-7	6.674645e-9
41	213893_x_at	242520_s_at	AW511110	C1orf228	0.656879	1.158562e-11	2.678249e-7	6.532314e-9
42	213893_x_at	203778_at	NM_005908	MANBA	0.656332	1.221019e-11	2.822631e-7	6.720549e-9
43	213893_x_at	216525_x_at	D38437	PMS2L3	0.655905	1.272115e-11	2.940748e-7	6.838949e-9
44	213893_x_at	208117_s_at	NM_031206	LAS1L	0.655758	1.290185e-11	2.982521e-7	6.778458e-9
45	213893_x_at	202401_s_at	NM_003131	SRF	0.654017	1.523524e-11	3.521930e-7	7.826512e-9
46	213893_x_at	201970_s_at	NM_002482	NASP	0.653893	1.541553e-11	3.563608e-7	7.746974e-9
47	213893_x_at	226068_at	BF593625	SYK	0.653855	1.547181e-11	3.576619e-7	7.609827e-9
48	213893_x_at	214501_s_at	AF044286	H2AFY	0.653143	1.655377e-11	3.826736e-7	7.972367e-9
49	213893_x_at	226315_at	AI337102	ZNF830	0.653036	1.672305e-11	3.865867e-7	7.889525e-9
50	213893_x_at	223157_at	BC004894	C4orf14	0.652362	1.782504e-11	4.120615e-7	8.241231e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation