[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5152	204835_at	NM_016937	POLA1		polymerase (DNA directed), alpha 1, catalytic subunit

Fetching correlation data, please wait...
Getting list of correlations for id 5152.
Getting list of p-values for id 5152.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.159 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204835_at	202521_at	NM_006565	CTCF	0.814436	4.435640e-21	1.025387e-16	1.025387e-16
2	204835_at	203344_s_at	NM_002894	RBBP8	0.749731	2.298282e-16	5.312938e-12	2.656469e-12
3	204835_at	226758_at	AA043552	LUC7L2	0.736939	1.335117e-15	3.086390e-11	1.028797e-11
4	204835_at	202128_at	NM_014821	KIAA0317	0.731359	2.787015e-15	6.442742e-11	1.610686e-11
5	204835_at	218754_at	NM_024654	NOL9	0.727881	4.368579e-15	1.009884e-10	2.019769e-11
6	204835_at	212802_s_at	AK023841	GAPVD1	0.715272	2.107158e-14	4.871118e-10	8.118530e-11
7	204835_at	223219_s_at	BC002931	CNOT10	0.706438	6.039389e-14	1.396126e-9	1.994465e-10
8	204835_at	219311_at	NM_024899	CEP76	0.705466	6.765205e-14	1.563913e-9	1.954891e-10
9	204835_at	216977_x_at	AJ130972	SNRPA1	0.704509	7.561423e-14	1.747974e-9	1.942193e-10
10	204835_at	222606_at	AA824298	ZWILCH	0.700424	1.209916e-13	2.796963e-9	2.796963e-10
11	204835_at	209054_s_at	AF083389	WHSC1	0.700421	1.210325e-13	2.797909e-9	2.543554e-10
12	204835_at	236027_at	N23587	C10orf78	0.699097	1.407176e-13	3.252969e-9	2.710807e-10
13	204835_at	210347_s_at	AF080216	BCL11A	0.698500	1.505784e-13	3.480920e-9	2.677631e-10
14	204835_at	243840_at	BF691634		0.697029	1.777606e-13	4.109292e-9	2.935209e-10
15	204835_at	203856_at	NM_003384	VRK1	0.694872	2.263565e-13	5.232683e-9	3.488455e-10
16	204835_at	227254_at	N56956	POU2F1	0.694504	2.358385e-13	5.451879e-9	3.407424e-10
17	204835_at	226481_at	W74375	VPRBP	0.694346	2.400211e-13	5.548568e-9	3.263864e-10
18	204835_at	63009_at	AI188402	SHQ1	0.691729	3.207136e-13	7.413937e-9	4.118854e-10
19	204835_at	209705_at	BG033764	MTF2	0.691487	3.293823e-13	7.614331e-9	4.007542e-10
20	204835_at	208955_at	AB049113	DUT	0.691198	3.400000e-13	7.859781e-9	3.929890e-10
21	204835_at	212165_at	AF070537		0.690934	3.500015e-13	8.090985e-9	3.852850e-10
22	204835_at	202413_s_at	NM_003368	USP1	0.690518	3.663421e-13	8.468731e-9	3.849423e-10
23	204835_at	227085_at	AI823792	H2AFV	0.689998	3.877911e-13	8.964566e-9	3.897637e-10
24	204835_at	228466_at	AI150690		0.689386	4.146284e-13	9.584965e-9	3.993736e-10
25	204835_at	213811_x_at	AW062341	TCF3	0.688765	4.436700e-13	1.025632e-8	4.102528e-10
26	204835_at	200854_at	AB028970	NCOR1	0.688235	4.699468e-13	1.086376e-8	4.178369e-10
27	204835_at	221776_s_at	AI885109	BRD7	0.687841	4.904817e-13	1.133847e-8	4.199432e-10
28	204835_at	226118_at	BE326728	CENPO	0.684622	6.938220e-13	1.603908e-8	5.728244e-10
29	204835_at	212836_at	D26018	POLD3	0.683405	7.901211e-13	1.826523e-8	6.298355e-10
30	204835_at	225456_at	AI708776	MED1	0.683337	7.958679e-13	1.839808e-8	6.132693e-10
31	204835_at	210776_x_at	M31222	TCF3	0.681328	9.849711e-13	2.276958e-8	7.345025e-10
32	204835_at	221677_s_at	AF232674		0.680723	1.049880e-12	2.427008e-8	7.584401e-10
33	204835_at	200594_x_at	NM_004501	HNRNPU	0.679867	1.148873e-12	2.655849e-8	8.048026e-10
34	204835_at	225601_at	AI806853	HMGB3	0.679681	1.171560e-12	2.708295e-8	7.965574e-10
35	204835_at	212837_at	D63877	FAM175B	0.678893	1.272401e-12	2.941409e-8	8.404027e-10
36	204835_at	205565_s_at	NM_000144	FXN	0.678771	1.288774e-12	2.979260e-8	8.275721e-10
37	204835_at	201413_at	NM_000414	HSD17B4	0.677100	1.534134e-12	3.546457e-8	9.585019e-10
38	204835_at	224847_at	AW051349	CDK6	0.675188	1.869989e-12	4.322854e-8	1.137593e-9
39	204835_at	223060_at	AF061731	C14orf119	0.674425	2.022956e-12	4.676467e-8	1.199094e-9
40	204835_at	204886_at	AL043646	PLK4	0.674071	2.097906e-12	4.849728e-8	1.212432e-9
41	204835_at	212547_at	N34842	BRD3	0.673928	2.128841e-12	4.921242e-8	1.200303e-9
42	204835_at	223414_s_at	AL136750	LYAR	0.672453	2.475842e-12	5.723405e-8	1.362715e-9
43	204835_at	221699_s_at	AF334103	DDX50	0.672351	2.501845e-12	5.783514e-8	1.345003e-9
44	204835_at	213730_x_at	BE962186	TCF3	0.671435	2.746443e-12	6.348953e-8	1.442944e-9
45	204835_at	219650_at	NM_017669	ERCC6L	0.670615	2.984870e-12	6.900123e-8	1.533361e-9
46	204835_at	217832_at	BE672181	SYNCRIP	0.669479	3.348126e-12	7.739863e-8	1.682579e-9
47	204835_at	204064_at	NM_005131	THOC1	0.668734	3.609019e-12	8.342970e-8	1.775100e-9
48	204835_at	226242_at	BF515750	C1orf131	0.668610	3.654257e-12	8.447546e-8	1.759905e-9
49	204835_at	221021_s_at	NM_030877	CTNNBL1	0.668064	3.860523e-12	8.924370e-8	1.821300e-9
50	204835_at	235192_at	BG236009	TP53RK	0.667566	4.058287e-12	9.381542e-8	1.876308e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation