[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
2198	201115_at	NM_006230	POLD2		polymerase (DNA directed), delta 2, regulatory subunit 50kDa

Fetching correlation data, please wait...
Getting list of correlations for id 2198.
Getting list of p-values for id 2198.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.137 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	201115_at	212411_at	BE747342	IMP4	0.827077	3.219252e-22	7.441946e-18	7.441946e-18
2	201115_at	221972_s_at	AL571362	SDF4	0.809865	1.090630e-20	2.521209e-16	1.260605e-16
3	201115_at	218206_x_at	NM_016558	SCAND1	0.795815	1.498408e-19	3.463870e-15	1.154623e-15
4	201115_at	203411_s_at	NM_005572	LMNA	0.792165	2.862970e-19	6.618327e-15	1.654582e-15
5	201115_at	206845_s_at	NM_014771	RNF40	0.784325	1.102173e-18	2.547894e-14	5.095788e-15
6	201115_at	201755_at	NM_006739	MCM5	0.783846	1.194728e-18	2.761853e-14	4.603089e-15
7	201115_at	208420_x_at	NM_003170	SUPT6H	0.780840	1.971149e-18	4.556705e-14	6.509579e-15
8	201115_at	200964_at	NM_003334	UBA1	0.778219	3.030960e-18	7.006670e-14	8.758338e-15
9	201115_at	203258_at	NM_006442	DRAP1	0.775756	4.517425e-18	1.044293e-13	1.160326e-14
10	201115_at	221711_s_at	BC006244	C19orf62	0.769942	1.136090e-17	2.626299e-13	2.626299e-14
11	201115_at	201284_s_at	NM_001640	APEH	0.769005	1.314875e-17	3.039596e-13	2.763269e-14
12	201115_at	201717_at	NM_004927	MRPL49	0.768060	1.522520e-17	3.519609e-13	2.933008e-14
13	201115_at	215735_s_at	AC005600	TSC2	0.768023	1.531368e-17	3.540064e-13	2.723126e-14
14	201115_at	222425_s_at	AW151250	POLDIP2	0.765958	2.104675e-17	4.865376e-13	3.475269e-14
15	201115_at	208831_x_at	D79984	SUPT6H	0.764768	2.524278e-17	5.835373e-13	3.890249e-14
16	201115_at	202492_at	NM_024085	ATG9A	0.764232	2.738482e-17	6.330548e-13	3.956593e-14
17	201115_at	221251_x_at	NM_031288	INO80B	0.764185	2.758171e-17	6.376063e-13	3.750625e-14
18	201115_at	205436_s_at	NM_002105	H2AFX	0.763861	2.897392e-17	6.697900e-13	3.721056e-14
19	201115_at	201264_at	NM_007263	COPE	0.762918	3.341426e-17	7.724374e-13	4.065460e-14
20	201115_at	223743_s_at	BC000756	MRPL4	0.761601	4.073825e-17	9.417461e-13	4.708731e-14
21	201115_at	231059_x_at	AI744643	SCAND1	0.756845	8.244860e-17	1.905964e-12	9.076021e-14
22	201115_at	91952_at	AI363375	DCAF15	0.753584	1.324765e-16	3.062460e-12	1.392027e-13
23	201115_at	201516_at	NM_003132	SRM	0.752548	1.537732e-16	3.554775e-12	1.545554e-13
24	201115_at	213318_s_at	BG028844	BAT3	0.751560	1.771542e-16	4.095274e-12	1.706364e-13
25	201115_at	203190_at	NM_002496	NDUFS8	0.750757	1.986437e-16	4.592046e-12	1.836819e-13
26	201115_at	204144_s_at	NM_004204	PIGQ	0.750613	2.027628e-16	4.687267e-12	1.802795e-13
27	201115_at	202264_s_at	NM_006114	TOMM40	0.750452	2.074667e-16	4.796009e-12	1.776300e-13
28	201115_at	201895_at	NM_001654	ARAF	0.749808	2.273160e-16	5.254865e-12	1.876738e-13
29	201115_at	207769_s_at	NM_005710	PQBP1	0.749540	2.361158e-16	5.458289e-12	1.882169e-13
30	201115_at	209350_s_at	AL157493		0.749220	2.470499e-16	5.711051e-12	1.903684e-13
31	201115_at	212891_s_at	BF972185	GADD45GIP1	0.747777	3.027316e-16	6.998246e-12	2.257499e-13
32	201115_at	202802_at	NM_001930	DHPS	0.747773	3.029127e-16	7.002432e-12	2.188260e-13
33	201115_at	200707_at	NM_002743	PRKCSH	0.745404	4.216113e-16	9.746388e-12	2.953451e-13
34	201115_at	211047_x_at	BC006337	AP2S1	0.744811	4.577366e-16	1.058150e-11	3.112205e-13
35	201115_at	231780_at	AI627912	GBGT1	0.743802	5.261826e-16	1.216376e-11	3.475361e-13
36	201115_at	200649_at	BC002356	NUCB1	0.742940	5.924594e-16	1.369588e-11	3.804412e-13
37	201115_at	221267_s_at	NM_031213	FAM108A1	0.742927	5.934917e-16	1.371975e-11	3.708040e-13
38	201115_at	1555735_a_at	AB002534	BAP1	0.742703	6.120111e-16	1.414786e-11	3.723121e-13
39	201115_at	210125_s_at	AF044773	BANF1	0.742240	6.521368e-16	1.507545e-11	3.865499e-13
40	201115_at	200922_at	NM_006801	KDELR1	0.741135	7.582441e-16	1.752833e-11	4.382082e-13
41	201115_at	214258_x_at	AA886971	KAT5	0.740408	8.369531e-16	1.934785e-11	4.718987e-13
42	201115_at	215684_s_at	AL096741	ASCC2	0.739403	9.589669e-16	2.216844e-11	5.278199e-13
43	201115_at	210504_at	U65404	KLF1	0.739319	9.698376e-16	2.241974e-11	5.213892e-13
44	201115_at	213892_s_at	AA927724	APRT	0.739282	9.747287e-16	2.253280e-11	5.121092e-13
45	201115_at	224468_s_at	BC006151	C19orf48	0.738333	1.107678e-15	2.560619e-11	5.690265e-13
46	201115_at	226437_at	AI079540	YIF1B	0.738288	1.114374e-15	2.576098e-11	5.600213e-13
47	201115_at	221755_at	BG334196	EHBP1L1	0.737666	1.211426e-15	2.800453e-11	5.958411e-13
48	201115_at	220757_s_at	NM_025241	UBXN6	0.736332	1.447628e-15	3.346481e-11	6.971836e-13
49	201115_at	218045_x_at	NM_002824	PTMS	0.735551	1.606135e-15	3.712903e-11	7.577353e-13
50	201115_at	201378_s_at	NM_014847	UBAP2L	0.735348	1.649819e-15	3.813886e-11	7.627772e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation