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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6545	208694_at	U47077	PRKDC		protein kinase, DNA-activated, catalytic polypeptide
7762	210543_s_at	U34994	PRKDC		protein kinase, DNA-activated, catalytic polypeptide

Fetching correlation data, please wait...
Getting list of correlations for id 6545.
Getting list of p-values for id 6545.
1 of 2 done.
Getting list of correlations for id 7762.
Getting list of p-values for id 7762.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.214 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	210543_s_at	204427_s_at	NM_006815	TMED2	0.906188	2.161096e-32	9.991610e-28	9.991610e-28
2	210543_s_at	217301_x_at	X71810	RBBP4	0.903602	6.252160e-32	2.890624e-27	1.445312e-27
3	210543_s_at	221428_s_at	NM_030921	TBL1XR1	0.897935	5.791114e-31	2.677464e-26	8.924879e-27
4	210543_s_at	210786_s_at	M93255	FLI1	0.888622	1.715140e-29	7.929780e-25	1.982445e-25
5	210543_s_at	216266_s_at	AK025637	ARFGEF1	0.887352	2.659939e-29	1.229796e-24	2.459592e-25
6	210543_s_at	204426_at	NM_006815	TMED2	0.886270	3.849577e-29	1.779813e-24	2.966356e-25
7	210543_s_at	211825_s_at	AF327066		0.886075	4.112322e-29	1.901291e-24	2.716130e-25
8	210543_s_at	202955_s_at	AF084520	ARFGEF1	0.886025	4.183003e-29	1.933969e-24	2.417462e-25
9	210543_s_at	200641_s_at	U28964	YWHAZ	0.882671	1.282025e-28	5.927315e-24	6.585905e-25
10	210543_s_at	201444_s_at	NM_005765	ATP6AP2	0.882315	1.440504e-28	6.660024e-24	6.660024e-25
11	210543_s_at	208097_s_at	NM_030755	TMX1	0.880017	3.035263e-28	1.403324e-23	1.275749e-24
12	210543_s_at	201727_s_at	NM_001419	ELAVL1	0.878796	4.482783e-28	2.072570e-23	1.727142e-24
13	210543_s_at	208698_s_at	L14599	NONO	0.878770	4.519991e-28	2.089773e-23	1.607518e-24
14	210543_s_at	200769_s_at	NM_005911	MAT2A	0.876058	1.058480e-27	4.893779e-23	3.495556e-24
15	210543_s_at	218178_s_at	NM_020412	CHMP1B	0.876050	1.061251e-27	4.906589e-23	3.271059e-24
16	210543_s_at	201504_s_at	AI435302	TSN	0.875898	1.112309e-27	5.142648e-23	3.214155e-24
17	210543_s_at	1555760_a_at	AF364037	RBM15	0.869474	7.705871e-27	3.562732e-22	2.095725e-23
18	210543_s_at	208852_s_at	AI761759	CANX	0.866436	1.858273e-26	8.591541e-22	4.773078e-23
19	210543_s_at	201742_x_at	NM_006924	SRSF1	0.866018	2.093995e-26	9.681375e-22	5.095461e-23
20	210543_s_at	202164_s_at	AF180476	CNOT8	0.864813	2.947541e-26	1.362766e-21	6.813830e-23
21	210543_s_at	200008_s_at	D13988	GDI2	0.864572	3.154802e-26	1.458591e-21	6.945671e-23
22	210543_s_at	202899_s_at	NM_003017	SRSF3	0.863887	3.824856e-26	1.768384e-21	8.038108e-23
23	210543_s_at	212515_s_at	BG492602	DDX3X	0.862838	5.125746e-26	2.369838e-21	1.030364e-22
24	210543_s_at	208867_s_at	AF119911	CSNK1A1	0.860916	8.711224e-26	4.027547e-21	1.678145e-22
25	210543_s_at	202162_s_at	AI769416	CNOT8	0.860132	1.079122e-25	4.989213e-21	1.995685e-22
26	210543_s_at	222983_s_at	BC001716	PAIP2	0.858757	1.566006e-25	7.240270e-21	2.784719e-22
27	210543_s_at	1554148_a_at	BC014416	SLC33A1	0.857813	2.017450e-25	9.327480e-21	3.454622e-22
28	210543_s_at	200927_s_at	AA919115	RAB14	0.856471	2.883289e-25	1.333060e-20	4.760927e-22
29	210543_s_at	202784_s_at	NM_012343	NNT	0.854410	4.954589e-25	2.290705e-20	7.898982e-22
30	210543_s_at	207564_x_at	NM_003605	OGT	0.854386	4.984946e-25	2.304740e-20	7.682466e-22
31	210543_s_at	222846_at	AB038995	RAB8B	0.854290	5.111269e-25	2.363144e-20	7.623045e-22
32	210543_s_at	1555814_a_at	AF498970	RHOA	0.853282	6.639403e-25	3.069662e-20	9.592692e-22
33	210543_s_at	208811_s_at	AF080569		0.852525	8.069308e-25	3.730764e-20	1.130534e-21
34	210543_s_at	211450_s_at	D89646	MSH6	0.852160	8.861305e-25	4.096936e-20	1.204981e-21
35	210543_s_at	203992_s_at	AF000992	KDM6A	0.850773	1.262260e-24	5.835933e-20	1.667410e-21
36	210543_s_at	201946_s_at	AL545982	CCT2	0.848338	2.328992e-24	1.076786e-19	2.991073e-21
37	210543_s_at	1554768_a_at	AF394735	MAD2L1	0.848168	2.429431e-24	1.123223e-19	3.035738e-21
38	210543_s_at	222699_s_at	BF439250	PLEKHF2	0.847729	2.709870e-24	1.252881e-19	3.297056e-21
39	210543_s_at	238451_at	BF693302	MPP7	0.846971	3.268845e-24	1.511318e-19	3.875174e-21
40	210543_s_at	1565269_s_at	AF047022	ATF1	0.843310	7.977920e-24	3.688512e-19	9.221279e-21
41	210543_s_at	202316_x_at	AW241715	UBE4B	0.841878	1.124035e-23	5.196865e-19	1.267528e-20
42	210543_s_at	201096_s_at	AL537042	ARF4	0.840075	1.722260e-23	7.962698e-19	1.895880e-20
43	210543_s_at	211676_s_at	AF056979	IFNGR1	0.839626	1.913611e-23	8.847387e-19	2.057532e-20
44	210543_s_at	205961_s_at	NM_004682	PSIP1	0.838977	2.227878e-23	1.030037e-18	2.340993e-20
45	210543_s_at	208884_s_at	AF006010	UBR5	0.837049	3.483620e-23	1.610617e-18	3.579149e-20
46	210543_s_at	1554834_a_at	AY062002	RASSF5	0.836932	3.579074e-23	1.654749e-18	3.597280e-20
47	210543_s_at	208403_x_at	NM_002382	MAX	0.836368	4.074342e-23	1.883731e-18	4.007939e-20
48	210543_s_at	208853_s_at	L18887	CANX	0.835257	5.252389e-23	2.428389e-18	5.059144e-20
49	210543_s_at	202978_s_at	AW204564	CREBZF	0.834054	6.899418e-23	3.189877e-18	6.509952e-20
50	210543_s_at	204147_s_at	NM_007111	TFDP1	0.832978	8.790705e-23	4.064294e-18	8.128589e-20

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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