[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
563	1555852_at	AI375915	PSMB9		proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)
4810	204279_at	NM_002800	PSMB9		proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)

Fetching correlation data, please wait...
Getting list of correlations for id 563.
Getting list of p-values for id 563.
1 of 2 done.
Getting list of correlations for id 4810.
Getting list of p-values for id 4810.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.232 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1555852_at	213160_at	D86964	DOCK2	0.784192	1.127199e-18	5.211493e-14	5.211493e-14
2	1555852_at	205270_s_at	NM_005565	LCP2	0.759347	5.701673e-17	2.636112e-12	1.318056e-12
3	1555852_at	227266_s_at	BF679849	FYB	0.735669	1.581079e-15	7.309960e-11	2.436653e-11
4	204279_at	209040_s_at	U17496	PSMB8	0.713602	2.579279e-14	1.192504e-9	2.981259e-10
5	1555852_at	207571_x_at	NM_004848	C1orf38	0.712601	2.909411e-14	1.345137e-9	2.690274e-10
6	1555852_at	202239_at	NM_006437	PARP4	0.712056	3.105907e-14	1.435985e-9	2.393309e-10
7	204279_at	209417_s_at	BC001356	IFI35	0.708594	4.687937e-14	2.167421e-9	3.096316e-10
8	1555852_at	228394_at	BE504180	STK10	0.701328	1.091150e-13	5.044824e-9	6.306030e-10
9	1555852_at	210785_s_at	AB035482	C1orf38	0.700780	1.161738e-13	5.371179e-9	5.967977e-10
10	1555852_at	226789_at	W84421	EMB	0.698484	1.508468e-13	6.974251e-9	6.974251e-10
11	1555852_at	224376_s_at	AF274948	C20orf24	0.694849	2.269391e-13	1.049230e-8	9.538456e-10
12	204279_at	204804_at	NM_003141	TRIM21	0.687724	4.967595e-13	2.296718e-8	1.913931e-9
13	1555852_at	205642_at	NM_007018	CEP110	0.681729	9.440974e-13	4.364940e-8	3.357646e-9
14	1555852_at	220980_s_at	NM_031284	ADPGK	0.681615	9.555449e-13	4.417866e-8	3.155619e-9
15	1555852_at	217978_s_at	NM_017582	UBE2Q1	0.678223	1.364757e-12	6.309817e-8	4.206545e-9
16	1555852_at	209040_s_at	U17496	PSMB8	0.676231	1.678925e-12	7.762342e-8	4.851464e-9
17	1555852_at	1554599_x_at	BC016767		0.666681	4.433666e-12	2.049861e-7	1.205801e-8
18	1555852_at	212415_at	AW150913	SEPT6	0.664189	5.679130e-12	2.625689e-7	1.458716e-8
19	1555852_at	209907_s_at	AF182198	ITSN2	0.664169	5.690715e-12	2.631045e-7	1.384761e-8
20	1555852_at	203513_at	NM_025137	SPG11	0.660166	8.428664e-12	3.896909e-7	1.948454e-8
21	1555852_at	217977_at	NM_016332	SEPX1	0.656440	1.208434e-11	5.587072e-7	2.660510e-8
22	204279_at	202659_at	NM_002801	PSMB10	0.656239	1.232067e-11	5.696340e-7	2.589245e-8
23	1555852_at	206576_s_at	NM_001712	CEACAM1	0.655967	1.264542e-11	5.846482e-7	2.541948e-8
24	1555852_at	218229_s_at	NM_017542	POGK	0.654473	1.458737e-11	6.744326e-7	2.810136e-8
25	1555852_at	209498_at	X16354	CEACAM1	0.653153	1.653862e-11	7.646464e-7	3.058586e-8
26	1555852_at	226577_at	N49844	PSEN1	0.650303	2.164019e-11	1.000513e-6	3.848125e-8
27	1555852_at	200791_s_at	NM_003870	IQGAP1	0.650162	2.192836e-11	1.013836e-6	3.754947e-8
28	1555852_at	215038_s_at	AF049103	SETD2	0.649893	2.248830e-11	1.039724e-6	3.713299e-8
29	1555852_at	223322_at	BC004270	RASSF5	0.649110	2.419899e-11	1.118816e-6	3.857987e-8
30	204279_at	221875_x_at	AW514210	HLA-F	0.648424	2.579775e-11	1.192733e-6	3.975778e-8
31	1555852_at	226391_at	AW271788		0.647667	2.768138e-11	1.279821e-6	4.128455e-8
32	1555852_at	225059_at	BE875567	AGTRAP	0.647341	2.853391e-11	1.319237e-6	4.122615e-8
33	204279_at	201762_s_at	NM_002818	PSME2	0.647187	2.894346e-11	1.338172e-6	4.055066e-8
34	204279_at	225929_s_at	AA233374	RNF213	0.646194	3.173355e-11	1.467169e-6	4.315203e-8
35	1555852_at	225808_at	AA883486	C17orf95	0.645840	3.278763e-11	1.515903e-6	4.331153e-8
36	1555852_at	224596_at	AI634866	SLC44A1	0.645140	3.497143e-11	1.616869e-6	4.491303e-8
37	1555852_at	203528_at	NM_006378	SEMA4D	0.644105	3.846205e-11	1.778255e-6	4.806094e-8
38	204279_at	201641_at	NM_004335	BST2	0.641496	4.880802e-11	2.256590e-6	5.938395e-8
39	1555852_at	214366_s_at	AA995910	ALOX5	0.640263	5.457887e-11	2.523399e-6	6.470255e-8
40	204279_at	202307_s_at	NM_000593	TAP1	0.639416	5.891878e-11	2.724051e-6	6.810128e-8
41	1555852_at	203490_at	NM_001421	ELF4	0.639238	5.987016e-11	2.768037e-6	6.751310e-8
42	1555852_at	1554597_at	BC016767		0.638993	6.120815e-11	2.829897e-6	6.737851e-8
43	1555852_at	212252_at	AA181179	CAMKK2	0.638391	6.461326e-11	2.987329e-6	6.947278e-8
44	1555852_at	211383_s_at	AL136827	WDR37	0.638274	6.529447e-11	3.018824e-6	6.860964e-8
45	204279_at	203882_at	NM_006084	IRF9	0.637533	6.978412e-11	3.226399e-6	7.169776e-8
46	1555852_at	221432_s_at	NM_031212	SLC25A28	0.636295	7.794302e-11	3.603618e-6	7.833951e-8
47	1555852_at	204034_at	NM_014297	ETHE1	0.635963	8.028441e-11	3.711869e-6	7.897595e-8
48	1555852_at	209238_at	BE966922	STX3	0.635010	8.738185e-11	4.040013e-6	8.416693e-8
49	1555852_at	226440_at	BE222746	DUSP22	0.633798	9.728459e-11	4.497856e-6	9.179297e-8
50	1555852_at	202181_at	NM_014734	KIAA0247	0.633683	9.828180e-11	4.543961e-6	9.087922e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation