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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
9319	213136_at	AI828880	PTPN2		protein tyrosine phosphatase, non-receptor type 2
9320	213137_s_at	AI828880	PTPN2		protein tyrosine phosphatase, non-receptor type 2

Fetching correlation data, please wait...
Getting list of correlations for id 9319.
Getting list of p-values for id 9319.
1 of 2 done.
Getting list of correlations for id 9320.
Getting list of p-values for id 9320.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.213 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	213137_s_at	226087_at	BG180887	LZIC	0.762514	3.551564e-17	1.642030e-12	1.642030e-12
2	213136_at	226917_s_at	AA604393	ANAPC4	0.743574	5.430162e-16	2.510581e-11	1.255291e-11
3	213136_at	238668_at	AI130690		0.741827	6.899706e-16	3.190010e-11	1.063337e-11
4	213137_s_at	1555762_s_at	AF364036		0.737615	1.219689e-15	5.639108e-11	1.409777e-11
5	213136_at	223294_at	BC001220	CXorf26	0.729778	3.421562e-15	1.581925e-10	3.163850e-11
6	213137_s_at	210097_s_at	AF130102	NOL7	0.728711	3.926938e-15	1.815581e-10	3.025968e-11
7	213137_s_at	222701_s_at	AA570393	CHCHD7	0.722256	8.909557e-15	4.119245e-10	5.884635e-11
8	213137_s_at	219258_at	NM_017858	TIPIN	0.714649	2.272651e-14	1.050737e-9	1.313422e-10
9	213137_s_at	209486_at	BC004546	UTP3	0.713060	2.753236e-14	1.272931e-9	1.414368e-10
10	213136_at	209285_s_at	N38985	C3orf63	0.702999	9.004855e-14	4.163305e-9	4.163305e-10
11	213136_at	201788_at	NM_007372	DDX42	0.701862	1.026328e-13	4.745126e-9	4.313751e-10
12	213137_s_at	221007_s_at	NM_030917	FIP1L1	0.698238	1.550967e-13	7.170742e-9	5.975618e-10
13	213137_s_at	208794_s_at	D26156	SMARCA4	0.696783	1.827539e-13	8.449446e-9	6.499574e-10
14	213137_s_at	1558236_at	BC014318		0.694248	2.426519e-13	1.121877e-8	8.013404e-10
15	213136_at	212010_s_at	AK025647	CDV3	0.692001	3.112309e-13	1.438945e-8	9.592967e-10
16	213136_at	225705_at	AI697340	CCDC45	0.691515	3.283619e-13	1.518149e-8	9.488429e-10
17	213136_at	222140_s_at	AK021758		0.691300	3.361962e-13	1.554369e-8	9.143349e-10
18	213136_at	219169_s_at	NM_016020	TFB1M	0.688386	4.623123e-13	2.137455e-8	1.187475e-9
19	213136_at	203778_at	NM_005908	MANBA	0.685472	6.334133e-13	2.928523e-8	1.541328e-9
20	213137_s_at	201323_at	NM_006824	EBNA1BP2	0.683116	8.148125e-13	3.767204e-8	1.883602e-9
21	213137_s_at	235132_at	BF939830	LOC254128	0.677883	1.414068e-12	6.537804e-8	3.113240e-9
22	213137_s_at	225082_at	NM_016207	CPSF3	0.674941	1.918288e-12	8.869015e-8	4.031370e-9
23	213136_at	201158_at	AI570834	NMT1	0.674081	2.095702e-12	9.689267e-8	4.212725e-9
24	213136_at	204064_at	NM_005131	THOC1	0.673066	2.325429e-12	1.075139e-7	4.479744e-9
25	213137_s_at	201948_at	NM_013285	GNL2	0.673050	2.329398e-12	1.076974e-7	4.307895e-9
26	213136_at	202657_s_at	NM_014755	SERTAD2	0.669770	3.251309e-12	1.503210e-7	5.781578e-9
27	213137_s_at	1553103_at	NM_147134	NFX1	0.665107	5.185725e-12	2.397568e-7	8.879881e-9
28	213137_s_at	219212_at	NM_016299	HSPA14	0.663218	6.250250e-12	2.889740e-7	1.032050e-8
29	213137_s_at	224714_at	AL542544	MKI67IP	0.662911	6.442445e-12	2.978600e-7	1.027103e-8
30	213137_s_at	1555495_a_at	BC012117	CWC27	0.661437	7.445216e-12	3.442221e-7	1.147407e-8
31	213137_s_at	219119_at	NM_016200	NAA38	0.659024	9.417364e-12	4.354024e-7	1.404524e-8
32	213137_s_at	226315_at	AI337102	ZNF830	0.658719	9.700088e-12	4.484739e-7	1.401481e-8
33	213136_at	211257_x_at	AF273049	ZNF638	0.657824	1.057713e-11	4.890229e-7	1.481888e-8
34	213136_at	229597_s_at	BF592952	WDFY4	0.656557	1.195013e-11	5.525023e-7	1.625007e-8
35	213137_s_at	202414_at	NM_000123	ERCC5	0.656126	1.245467e-11	5.758293e-7	1.645227e-8
36	213137_s_at	203675_at	NM_005013	NUCB2	0.655983	1.262595e-11	5.837480e-7	1.621522e-8
37	213136_at	202414_at	NM_000123	ERCC5	0.655682	1.299647e-11	6.008789e-7	1.623997e-8
38	213136_at	223445_at	AF061734	DTNBP1	0.655389	1.336540e-11	6.179361e-7	1.626148e-8
39	213136_at	223110_at	BC003701	KIAA1429	0.654687	1.429206e-11	6.607791e-7	1.694305e-8
40	213136_at	218333_at	NM_016041	DERL2	0.653425	1.611638e-11	7.451248e-7	1.862812e-8
41	213137_s_at	212591_at	AA887480	RBM34	0.652697	1.726899e-11	7.984144e-7	1.947352e-8
42	213137_s_at	203721_s_at	NM_016001	UTP18	0.652307	1.791760e-11	8.284022e-7	1.972386e-8
43	213137_s_at	223294_at	BC001220	CXorf26	0.649931	2.241019e-11	1.036113e-6	2.409565e-8
44	213136_at	209252_at	U18937	HARS2	0.648278	2.615141e-11	1.209084e-6	2.747919e-8
45	213136_at	223513_at	AF139625	CENPJ	0.648093	2.660675e-11	1.230137e-6	2.733637e-8
46	213137_s_at	203396_at	NM_002789	PSMA4	0.646177	3.178238e-11	1.469426e-6	3.194405e-8
47	213136_at	208715_at	BF002031	TMCO1	0.645898	3.261216e-11	1.507791e-6	3.208065e-8
48	213136_at	204613_at	NM_002661	PLCG2	0.645279	3.452747e-11	1.596343e-6	3.325715e-8
49	213136_at	218809_at	NM_024960	PANK2	0.644588	3.679642e-11	1.701246e-6	3.471930e-8
50	213137_s_at	239824_s_at	BF971873	TMEM107	0.644229	3.802816e-11	1.758194e-6	3.516388e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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