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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1021	1559018_at	AL832042	PTPRE		protein tyrosine phosphatase, receptor type, E
13320	221840_at	AA775177	PTPRE		protein tyrosine phosphatase, receptor type, E

Fetching correlation data, please wait...
Getting list of correlations for id 1021.
Getting list of p-values for id 1021.
1 of 2 done.
Getting list of correlations for id 13320.
Getting list of p-values for id 13320.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.238 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	221840_at	203513_at	NM_025137	SPG11	0.789307	4.711447e-19	2.178290e-14	2.178290e-14
2	221840_at	205786_s_at	NM_000632	ITGAM	0.729867	3.382522e-15	1.563875e-10	7.819377e-11
3	221840_at	202370_s_at	NM_001755	CBFB	0.728426	4.073515e-15	1.883349e-10	6.277829e-11
4	221840_at	213160_at	D86964	DOCK2	0.710255	3.850511e-14	1.780245e-9	4.450613e-10
5	221840_at	209238_at	BE966922	STX3	0.702813	9.199687e-14	4.253383e-9	8.506766e-10
6	221840_at	228812_at	AI652899		0.693361	2.677732e-13	1.238023e-8	2.063371e-9
7	221840_at	221774_x_at	AW003334	FAM48A	0.688064	4.787794e-13	2.213589e-8	3.162269e-9
8	221840_at	205642_at	NM_007018	CEP110	0.686884	5.440101e-13	2.515176e-8	3.143970e-9
9	221840_at	230917_at	AW611685		0.686263	5.817178e-13	2.689514e-8	2.988349e-9
10	221840_at	202529_at	NM_002766	PRPSAP1	0.682796	8.430719e-13	3.897859e-8	3.897859e-9
11	221840_at	227755_at	AA042983		0.681273	9.907169e-13	4.580481e-8	4.164073e-9
12	221840_at	226330_s_at	BF739930	FAM48A	0.675510	1.808915e-12	8.363338e-8	6.969448e-9
13	221840_at	217028_at	AJ224869	CXCR4	0.673732	2.172026e-12	1.004214e-7	7.724726e-9
14	221840_at	223650_s_at	AF267866	NRBF2	0.673636	2.193499e-12	1.014142e-7	7.243873e-9
15	221840_at	225558_at	R38084	GIT2	0.673551	2.212765e-12	1.023050e-7	6.820332e-9
16	221840_at	225414_at	AL558987	RNF149	0.669588	3.311523e-12	1.531050e-7	9.569060e-9
17	221840_at	223174_at	BC005071	BTBD10	0.669063	3.491566e-12	1.614290e-7	9.495826e-9
18	221840_at	200738_s_at	NM_000291	PGK1	0.667263	4.183229e-12	1.934074e-7	1.074486e-8
19	221840_at	200791_s_at	NM_003870	IQGAP1	0.661347	7.510574e-12	3.472439e-7	1.827599e-8
20	221840_at	229670_at	BF056369		0.660823	7.905260e-12	3.654918e-7	1.827459e-8
21	221840_at	1552275_s_at	BG573647	PXK	0.659635	8.875105e-12	4.103316e-7	1.953960e-8
22	221840_at	212561_at	AA349595	DENND5A	0.656763	1.171562e-11	5.416598e-7	2.462090e-8
23	221840_at	227178_at	AI652861	CELF2	0.656475	1.204427e-11	5.568548e-7	2.421108e-8
24	221840_at	203378_at	AB020631	PCF11	0.649642	2.302389e-11	1.064487e-6	4.435361e-8
25	221840_at	209239_at	M55643	NFKB1	0.648737	2.505632e-11	1.158454e-6	4.633816e-8
26	221840_at	235427_at	AA418074		0.648719	2.509840e-11	1.160400e-6	4.463075e-8
27	221840_at	202777_at	NM_007373	SHOC2	0.648087	2.662222e-11	1.230852e-6	4.558710e-8
28	221840_at	212277_at	AB014547	MTMR4	0.646156	3.184528e-11	1.472335e-6	5.258338e-8
29	221840_at	219938_s_at	NM_024430	PSTPIP2	0.645395	3.416070e-11	1.579386e-6	5.446158e-8
30	221840_at	225231_at	AI828967	CBL	0.643336	4.127216e-11	1.908177e-6	6.360591e-8
31	221840_at	217827_s_at	NM_016630	SPG21	0.642473	4.465436e-11	2.064550e-6	6.659838e-8
32	221840_at	213541_s_at	AI351043	ERG	0.639506	5.844202e-11	2.702008e-6	8.443776e-8
33	221840_at	212017_at	BF677404	FAM168B	0.639319	5.943538e-11	2.747936e-6	8.327078e-8
34	221840_at	227768_at	AB051490	ZNF407	0.638275	6.529376e-11	3.018792e-6	8.878799e-8
35	221840_at	203135_at	NM_003194	TBP	0.637963	6.714497e-11	3.104381e-6	8.869659e-8
36	221840_at	218319_at	NM_020651	PELI1	0.637771	6.830819e-11	3.158161e-6	8.772669e-8
37	221840_at	220408_x_at	NM_017569	FAM48A	0.636451	7.686836e-11	3.553932e-6	9.605222e-8
38	221840_at	225177_at	AA143793	RAB11FIP1	0.635786	8.156492e-11	3.771073e-6	9.923875e-8
39	221840_at	203624_at	NM_005088	SFRS17A	0.633608	9.892952e-11	4.573908e-6	1.172797e-7
40	221840_at	225740_x_at	AA961420	MDM4	0.632941	1.049299e-10	4.851328e-6	1.212832e-7
41	221840_at	204872_at	NM_007005	TLE4	0.631278	1.214301e-10	5.614198e-6	1.369317e-7
42	221840_at	230264_s_at	AA551090	AP1S2	0.630637	1.284219e-10	5.937457e-6	1.413680e-7
43	221840_at	202670_at	AI571419	MAP2K1	0.630338	1.318259e-10	6.094840e-6	1.417405e-7
44	221840_at	1555888_at	AK095151	UBR5	0.628756	1.512766e-10	6.994121e-6	1.589573e-7
45	221840_at	200867_at	AL031685	RNF114	0.627537	1.681140e-10	7.772583e-6	1.727241e-7
46	221840_at	221581_s_at	AF257135	LAT2	0.626667	1.812210e-10	8.378571e-6	1.821428e-7
47	221840_at	201034_at	BE545756	ADD3	0.626055	1.910083e-10	8.831079e-6	1.878953e-7
48	221840_at	200609_s_at	NM_017491	WDR1	0.624880	2.112665e-10	9.767695e-6	2.034936e-7
49	221840_at	235766_x_at	AA743462	RAB27A	0.624421	2.197263e-10	1.015883e-5	2.073230e-7
50	221840_at	209539_at	D25304	ARHGEF6	0.623515	2.373700e-10	1.097456e-5	2.194913e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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