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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6354	208121_s_at	NM_002848	PTPRO		protein tyrosine phosphatase, receptor type, O
8138	211600_at	U20489	PTPRO		protein tyrosine phosphatase, receptor type, O

Fetching correlation data, please wait...
Getting list of correlations for id 6354.
Getting list of p-values for id 6354.
1 of 2 done.
Getting list of correlations for id 8138.
Getting list of p-values for id 8138.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.164 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	211600_at	1555653_at	BC012090	HNRNPA3	0.766102	2.058744e-17	9.518398e-13	9.518398e-13
2	211600_at	1553588_at	NM_173710	SH3KBP1	0.664311	5.611228e-12	2.594295e-7	1.297148e-7
3	211600_at	244011_at	BF507342	PPM1K	0.661490	7.406422e-12	3.424285e-7	1.141428e-7
4	211600_at	218251_at	NM_021242	MID1IP1	0.625611	1.984469e-10	9.174992e-6	2.293748e-6
5	211600_at	209535_s_at	AF127481		-0.619660	3.288974e-10	1.520624e-5	3.041249e-6
6	211600_at	203254_s_at	NM_006289	TLN1	0.599218	1.724990e-9	7.975321e-5	1.329220e-5
7	211600_at	32836_at	U56417	AGPAT1	0.595255	2.347026e-9	1.085124e-4	1.550177e-5
8	211600_at	204986_s_at	NM_016151	TAOK2	0.588838	3.830477e-9	1.770983e-4	2.213728e-5
9	211600_at	215535_s_at	AF007145	AGPAT1	0.584437	5.326971e-9	2.462872e-4	2.736524e-5
10	211600_at	225393_at	BE206212	GATAD2B	0.583110	5.878438e-9	2.717837e-4	2.717837e-5
11	211600_at	208997_s_at	U82819	UCP2	0.577172	9.085572e-9	4.200623e-4	3.818749e-5
12	211600_at	203275_at	NM_002199	IRF2	0.575417	1.031584e-8	4.769425e-4	3.974521e-5
13	211600_at	1553569_at	NM_173705	ZFYVE20	0.575359	1.035957e-8	4.789644e-4	3.684342e-5
14	211600_at	218323_at	NM_018307	RHOT1	-0.574627	1.092043e-8	5.048953e-4	3.606395e-5
15	211600_at	202249_s_at	AU146233	DCAF8	0.566753	1.910622e-8	8.833572e-4	5.889048e-5
16	211600_at	201439_at	NM_004193	GBF1	0.557712	3.567808e-8	1.649540e-3	1.030963e-4
17	211600_at	213011_s_at	BF116254	TPI1	0.554819	4.340007e-8	2.006559e-3	1.180329e-4
18	211600_at	231576_at	AA829940		-0.554271	4.503212e-8	2.082015e-3	1.156675e-4
19	211600_at	209469_at	BF939489	GPM6A	-0.550164	5.925582e-8	2.739633e-3	1.441912e-4
20	211600_at	204102_s_at	NM_001961	EEF2	0.549458	6.209269e-8	2.870794e-3	1.435397e-4
21	211600_at	213360_s_at	AA514622		0.549379	6.242056e-8	2.885952e-3	1.374263e-4
22	211600_at	201229_s_at	BC000422	ARIH2	0.543969	8.902904e-8	4.116169e-3	1.870986e-4
23	211600_at	60794_f_at	AI400621	ZNF814	-0.543552	9.147449e-8	4.229231e-3	1.838796e-4
24	211600_at	212090_at	AL571424	GRINA	0.542652	9.697565e-8	4.483572e-3	1.868155e-4
25	211600_at	200822_x_at	NM_000365	TPI1	0.542240	9.959494e-8	4.604672e-3	1.841869e-4
26	211600_at	225425_s_at	AV726260	MRPL41	0.541878	1.019537e-7	4.713729e-3	1.812973e-4
27	211600_at	224372_at	AF253979		0.540494	1.114746e-7	5.153915e-3	1.908857e-4
28	211600_at	209117_at	U79458	WBP2	0.540371	1.123543e-7	5.194588e-3	1.855210e-4
29	211600_at	209675_s_at	BC004242	HNRNPUL1	0.540221	1.134433e-7	5.244940e-3	1.808600e-4
30	211600_at	210733_at	AF130055	TRAM1	-0.540187	1.136973e-7	5.256682e-3	1.752227e-4
31	211600_at	201155_s_at	NM_014874	MFN2	0.538769	1.245146e-7	5.756809e-3	1.857035e-4
32	211600_at	232280_at	AK022257	SLC25A29	0.538086	1.300723e-7	6.013765e-3	1.879301e-4
33	211600_at	227511_at	BE963280	SAMD4B	0.537446	1.354907e-7	6.264278e-3	1.898266e-4
34	211600_at	226714_at	AA149818	SAMD4B	0.537413	1.357753e-7	6.277435e-3	1.846304e-4
35	211600_at	214106_s_at	AI762113	GMDS	-0.536934	1.399751e-7	6.471609e-3	1.849031e-4
36	211600_at	221251_x_at	NM_031288	INO80B	0.535846	1.499830e-7	6.934315e-3	1.926199e-4
37	208121_s_at	213528_at	AL035369	C1orf156	0.534802	1.602208e-7	7.407648e-3	2.002067e-4
38	211600_at	204632_at	NM_003942	RPS6KA4	0.534022	1.683103e-7	7.781657e-3	2.047804e-4
39	211600_at	208874_x_at	BC002545	PPP2R4	0.534007	1.684650e-7	7.788810e-3	1.997131e-4
40	211600_at	1553570_x_at	NM_173705	ZFYVE20	0.533947	1.691017e-7	7.818249e-3	1.954562e-4
41	211600_at	224821_at	AL520200	ABHD14B	0.533460	1.743635e-7	8.061521e-3	1.966225e-4
42	211600_at	242312_x_at	AV736963		-0.532450	1.857749e-7	8.589116e-3	2.045028e-4
43	211600_at	223112_s_at	AF044954	NDUFB10	0.532272	1.878588e-7	8.685462e-3	2.019875e-4
44	211600_at	200649_at	BC002356	NUCB1	0.530417	2.109404e-7	9.752620e-3	2.216505e-4
45	211600_at	226861_at	BF223343	ASB8	0.529807	2.190920e-7	1.012950e-2	2.251000e-4
46	211600_at	244587_at	AA534039	ATF7	0.527558	2.518297e-7	1.164309e-2	2.531107e-4
47	211600_at	202110_at	NM_001866	COX7B	0.527415	2.540638e-7	1.174639e-2	2.499231e-4
48	211600_at	200600_at	NM_002444	MSN	0.526367	2.709891e-7	1.252891e-2	2.610190e-4
49	211600_at	220248_x_at	NM_018839	NSFL1C	0.525825	2.801600e-7	1.295292e-2	2.643452e-4
50	211600_at	238015_at	BE620598	C4orf46	-0.525572	2.845547e-7	1.315610e-2	2.631220e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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