[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5791	206157_at	NM_002852	PTX3		pentraxin 3, long

Fetching correlation data, please wait...
Getting list of correlations for id 5791.
Getting list of p-values for id 5791.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.137 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	206157_at	209183_s_at	AL136653	C10orf10	0.621353	2.851618e-10	6.592085e-6	6.592085e-6
2	206157_at	220161_s_at	NM_019114	EPB41L4B	0.595750	2.258986e-9	5.222098e-5	2.611049e-5
3	206157_at	203455_s_at	NM_002970	SAT1	0.593169	2.755374e-9	6.369598e-5	2.123199e-5
4	206157_at	228128_x_at	AI110886	PAPPA	0.592610	2.875873e-9	6.648155e-5	1.662039e-5
5	206157_at	217752_s_at	NM_018235	CNDP2	0.570638	1.452518e-8	3.357787e-4	6.715573e-5
6	206157_at	209576_at	AL049933	GNAI1	0.570390	1.478272e-8	3.417322e-4	5.695536e-5
7	206157_at	233085_s_at	AV734843	OBFC2A	0.555375	4.180191e-8	9.663348e-4	1.380478e-4
8	206157_at	203837_at	NM_005923	MAP3K5	0.549241	6.299117e-8	1.456167e-3	1.820209e-4
9	206157_at	206618_at	NM_003855	IL18R1	0.548001	6.837098e-8	1.580532e-3	1.756147e-4
10	206157_at	1552519_at	NM_145259	ACVR1C	0.539284	1.204801e-7	2.785138e-3	2.785138e-4
11	206157_at	231234_at	AV699565	CTSC	0.533152	1.777694e-7	4.109495e-3	3.735904e-4
12	206157_at	215001_s_at	AL161952	GLUL	0.531025	2.030990e-7	4.695038e-3	3.912532e-4
13	206157_at	203549_s_at	NM_000237	LPL	0.524389	3.059153e-7	7.071843e-3	5.439879e-4
14	206157_at	222589_at	AI967933	NLK	0.523880	3.155613e-7	7.294830e-3	5.210593e-4
15	206157_at	47105_at	AA886893	DUS2L	0.523582	3.213362e-7	7.428329e-3	4.952219e-4
16	206157_at	211678_s_at	AF090934	RNF114	0.522555	3.420445e-7	7.907043e-3	4.941902e-4
17	206157_at	235706_at	AW663908	CPM	0.520940	3.772030e-7	8.719802e-3	5.129295e-4
18	206157_at	202786_at	NM_013233	STK39	0.518685	4.320280e-7	9.987192e-3	5.548440e-4
19	206157_at	229970_at	BE672291		0.518272	4.428420e-7	1.023718e-2	5.387988e-4
20	206157_at	1553955_at	AY134855	KLRAQ1	0.517299	4.693798e-7	1.085065e-2	5.425326e-4
21	206157_at	207405_s_at	NM_002873	RAD17	0.513828	5.767955e-7	1.333378e-2	6.349420e-4
22	206157_at	209613_s_at	M21692	ADH1B	0.513572	5.855629e-7	1.353646e-2	6.152936e-4
23	206157_at	205498_at	NM_000163	GHR	0.509574	7.402117e-7	1.711147e-2	7.439771e-4
24	206157_at	206100_at	NM_001874	CPM	0.507084	8.552587e-7	1.977102e-2	8.237923e-4
25	206157_at	200832_s_at	AB032261	SCD	0.502904	1.087190e-6	2.513257e-2	1.005303e-3
26	206157_at	228772_at	AU157303	HNMT	0.497761	1.454309e-6	3.361926e-2	1.293048e-3
27	206157_at	202237_at	NM_006169	NNMT	0.496033	1.601944e-6	3.703214e-2	1.371561e-3
28	206157_at	200847_s_at	NM_016127	TMEM66	0.495486	1.651498e-6	3.817769e-2	1.363489e-3
29	206157_at	214281_s_at	AA524525	RCHY1	0.493729	1.820866e-6	4.209297e-2	1.451482e-3
30	206157_at	64418_at	AI472320	SYNRG	0.492233	1.977778e-6	4.572029e-2	1.524010e-3
31	206157_at	217842_at	NM_016019	LUC7L2	0.491089	2.106215e-6	4.868938e-2	1.570625e-3
32	206157_at	222872_x_at	AU157541	OBFC2A	0.490269	2.203123e-6	5.092960e-2	1.591550e-3
33	206157_at	218226_s_at	NM_004547	NDUFB4	-0.489703	2.272499e-6	5.253337e-2	1.591920e-3
34	206157_at	213933_at	AW242315	PTGER3	0.489538	2.293163e-6	5.301106e-2	1.559149e-3
35	206157_at	1569129_s_at	BC016013	C3orf38	0.488377	2.443099e-6	5.647712e-2	1.613632e-3
36	206157_at	205395_s_at	NM_005590	MRE11A	0.487681	2.537323e-6	5.865529e-2	1.629314e-3
37	206157_at	226885_at	AI743880		0.486824	2.658130e-6	6.144798e-2	1.660756e-3
38	206157_at	223839_s_at	AF132203	SCD	0.485306	2.885483e-6	6.670371e-2	1.755361e-3
39	206157_at	209763_at	AL049176	CHRDL1	0.485062	2.923724e-6	6.758773e-2	1.733019e-3
40	206157_at	201963_at	NM_021122	ACSL1	0.484697	2.981850e-6	6.893143e-2	1.723286e-3
41	206157_at	227692_at	AU153866	GNAI1	0.484490	3.015120e-6	6.970052e-2	1.700013e-3
42	206157_at	218265_at	NM_024077	SECISBP2	0.483834	3.123335e-6	7.220215e-2	1.719099e-3
43	206157_at	224940_s_at	BF107618	PAPPA	0.483083	3.251764e-6	7.517102e-2	1.748163e-3
44	206157_at	235767_x_at	AI338514	PHAX	0.479662	3.901781e-6	9.019747e-2	2.049942e-3
45	206157_at	221509_at	AB014731	DENR	0.478937	4.054477e-6	9.372735e-2	2.082830e-3
46	206157_at	213943_at	X99268	TWIST1	0.478602	4.126927e-6	9.540217e-2	2.073960e-3
47	206157_at	202785_at	NM_005001	NDUFA7	-0.476470	4.616947e-6	1.067300e-1	2.270850e-3
48	206157_at	203468_at	NM_003674	CDK10	0.475986	4.735503e-6	1.094706e-1	2.280638e-3
49	206157_at	226449_at	AI392933	CEP120	0.475591	4.834478e-6	1.117586e-1	2.280788e-3
50	206157_at	239680_at	AI220472	WDR76	0.475026	4.979328e-6	1.151071e-1	2.302143e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation