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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5775	206113_s_at	NM_004162	RAB5A		RAB5A, member RAS oncogene family
6906	209089_at	BC001267	RAB5A		RAB5A, member RAS oncogene family
21367	240990_at	AI336836	RAB5A		RAB5A, member RAS oncogene family

Fetching correlation data, please wait...
Getting list of correlations for id 5775.
Getting list of p-values for id 5775.
1 of 3 done.
Getting list of correlations for id 6906.
Getting list of p-values for id 6906.
2 of 3 done.
Getting list of correlations for id 21367.
Getting list of p-values for id 21367.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.259 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	206113_s_at	213548_s_at	BG257762	CDV3	0.911263	2.451738e-33	1.700305e-28	1.700305e-28
2	206113_s_at	220386_s_at	NM_019063	EML4	0.890796	7.994535e-30	5.544290e-25	2.772145e-25
3	206113_s_at	209055_s_at	AW268817	CDC5L	0.878804	4.471941e-28	3.101336e-23	1.033779e-23
4	206113_s_at	211547_s_at	L13387	PAFAH1B1	0.878770	4.520477e-28	3.134996e-23	7.837491e-24
5	206113_s_at	222406_s_at	AV738970		0.876636	8.842852e-28	6.132606e-23	1.226521e-23
6	206113_s_at	1555996_s_at	AI332397	EIF4A2	0.874916	1.505761e-27	1.044261e-22	1.740434e-23
7	206113_s_at	208840_s_at	AU149503	G3BP2	0.872852	2.821387e-27	1.956660e-22	2.795229e-23
8	206113_s_at	201742_x_at	NM_006924	SRSF1	0.872195	3.437946e-27	2.384250e-22	2.980312e-23
9	206113_s_at	214544_s_at	NM_003825	SNAP23	0.868668	9.753836e-27	6.764382e-22	7.515981e-23
10	206113_s_at	200604_s_at	M18468	PRKAR1A	0.868366	1.064949e-26	7.385526e-22	7.385526e-23
11	206113_s_at	1552660_a_at	BC021215	C5orf22	0.868011	1.180606e-26	8.187621e-22	7.443291e-23
12	206113_s_at	201383_s_at	AL044170	NBR1	0.868005	1.182709e-26	8.202205e-22	6.835171e-23
13	206113_s_at	222697_s_at	AI521709	ABHD10	0.866094	2.048660e-26	1.420766e-21	1.092897e-22
14	206113_s_at	215236_s_at	AV721177	PICALM	0.865579	2.372701e-26	1.645492e-21	1.175351e-22
15	206113_s_at	1554747_a_at	BC033559	SEPT2	0.861274	7.898427e-26	5.477638e-21	3.651759e-22
16	206113_s_at	222846_at	AB038995	RAB8B	0.859641	1.233200e-25	8.552367e-21	5.345230e-22
17	206113_s_at	1565269_s_at	AF047022	ATF1	0.859036	1.452588e-25	1.007384e-20	5.925789e-22
18	206113_s_at	204426_at	NM_006815	TMED2	0.856363	2.966770e-25	2.057485e-20	1.143047e-21
19	206113_s_at	227924_at	BF571256	INO80D	0.855793	3.448448e-25	2.391533e-20	1.258702e-21
20	206113_s_at	1554794_a_at	BC014029	UBE3C	0.855156	4.076109e-25	2.826823e-20	1.413411e-21
21	206113_s_at	224311_s_at	AF151824	CAB39	0.854931	4.324587e-25	2.999144e-20	1.428164e-21
22	206113_s_at	208811_s_at	AF080569		0.853480	6.308569e-25	4.375056e-20	1.988662e-21
23	206113_s_at	213022_s_at	NM_007124	UTRN	0.851565	1.031984e-24	7.156912e-20	3.111701e-21
24	206113_s_at	214483_s_at	AF124489	ARFIP1	0.851556	1.034232e-24	7.172504e-20	2.988543e-21
25	206113_s_at	201823_s_at	NM_004290	RNF14	0.851104	1.160519e-24	8.048317e-20	3.219327e-21
26	206113_s_at	211080_s_at	Z25425	NEK2	0.850695	1.287647e-24	8.929959e-20	3.434599e-21
27	206113_s_at	224046_s_at	U67932	PDE7A	0.850343	1.407480e-24	9.761012e-20	3.615190e-21
28	206113_s_at	222393_s_at	AU149868	NAA50	0.849633	1.683608e-24	1.167599e-19	4.169996e-21
29	206113_s_at	208097_s_at	NM_030755	TMX1	0.849605	1.695802e-24	1.176056e-19	4.055365e-21
30	206113_s_at	201337_s_at	NM_004781	VAMP3	0.849500	1.741084e-24	1.207459e-19	4.024865e-21
31	206113_s_at	221618_s_at	AF220509	TAF9B	0.849143	1.904129e-24	1.320532e-19	4.259782e-21
32	206113_s_at	222678_s_at	BF057821	DCUN1D1	0.848082	2.481986e-24	1.721282e-19	5.379006e-21
33	206113_s_at	1558093_s_at	BI832461	MATR3	0.847730	2.708882e-24	1.878637e-19	5.692839e-21
34	206113_s_at	212286_at	AW572909	ANKRD12	0.847416	2.928577e-24	2.030997e-19	5.973522e-21
35	206113_s_at	233924_s_at	AK002113	EXOC6	0.847315	3.002856e-24	2.082510e-19	5.950030e-21
36	206113_s_at	212514_x_at	R60068	DDX3X	0.846962	3.276441e-24	2.272245e-19	6.311791e-21
37	206113_s_at	217777_s_at	NM_016395	PTPLAD1	0.846848	3.370117e-24	2.337210e-19	6.316783e-21
38	206113_s_at	215707_s_at	AV725328	PRNP	0.846594	3.587197e-24	2.487757e-19	6.546729e-21
39	206113_s_at	212008_at	N29889	UBXN4	0.846400	3.762700e-24	2.609470e-19	6.690949e-21
40	206113_s_at	203134_at	NM_007166	PICALM	0.846209	3.943118e-24	2.734592e-19	6.836479e-21
41	206113_s_at	211814_s_at	AF112857	CCNE2	0.842303	1.015675e-23	7.043811e-19	1.718003e-20
42	206113_s_at	210178_x_at	AF047448	SRSF10	0.842129	1.058747e-23	7.342516e-19	1.748218e-20
43	206113_s_at	220368_s_at	NM_017936	SMEK1	0.841754	1.157515e-23	8.027480e-19	1.866856e-20
44	206113_s_at	202199_s_at	AW082913	SRPK1	0.841262	1.300989e-23	9.022490e-19	2.050566e-20
45	206113_s_at	221060_s_at	NM_003266	TLR4	0.841167	1.330653e-23	9.228212e-19	2.050714e-20
46	206113_s_at	201946_s_at	AL545982	CCT2	0.839527	1.958773e-23	1.358429e-18	2.953106e-20
47	206113_s_at	200806_s_at	BE256479	HSPD1	0.839396	2.019966e-23	1.400867e-18	2.980568e-20
48	206113_s_at	200796_s_at	BF594446	MCL1	0.838411	2.541604e-23	1.762628e-18	3.672141e-20
49	206113_s_at	201504_s_at	AI435302	TSN	0.837910	2.855169e-23	1.980089e-18	4.040997e-20
50	240990_at	236367_at	N33174	SMG7	0.837745	2.966524e-23	2.057314e-18	4.114629e-20

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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