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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 5 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
7246	209514_s_at	BE502030	RAB27A		RAB27A, member RAS oncogene family
7247	209515_s_at	U38654	RAB27A		RAB27A, member RAS oncogene family
7925	210951_x_at	AF125393	RAB27A		RAB27A, member RAS oncogene family
13544	222294_s_at	AW971415	RAB27A		RAB27A, member RAS oncogene family
20028	235766_x_at	AA743462	RAB27A		RAB27A, member RAS oncogene family

Fetching correlation data, please wait...
Getting list of correlations for id 7246.
Getting list of p-values for id 7246.
1 of 5 done.
Getting list of correlations for id 7247.
Getting list of p-values for id 7247.
2 of 5 done.
Getting list of correlations for id 7925.
Getting list of p-values for id 7925.
3 of 5 done.
Getting list of correlations for id 13544.
Getting list of p-values for id 13544.
4 of 5 done.
Getting list of correlations for id 20028.
Getting list of p-values for id 20028.
5 of 5 done.
Calculating corrections for multiple testing (n=115585), please wait...
Done; whole program took 0.455 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	210951_x_at	209514_s_at	BE502030	RAB27A	0.982157	2.778438e-61	3.211458e-56	3.211458e-56
2	209514_s_at	210951_x_at	AF125393	RAB27A	0.982157	2.778438e-61	3.211458e-56	1.605729e-56
3	235766_x_at	202228_s_at	NM_017455	NPTN	0.815621	3.498455e-21	4.043690e-16	1.347897e-16
4	235766_x_at	222294_s_at	AW971415	RAB27A	0.809670	1.132662e-20	1.309187e-15	3.272968e-16
5	222294_s_at	235766_x_at	AA743462	RAB27A	0.809670	1.132662e-20	1.309187e-15	2.618374e-16
6	210951_x_at	203922_s_at	AI308863	CYBB	0.807339	1.774645e-20	2.051223e-15	3.418706e-16
7	222294_s_at	230875_s_at	AW068936	ATP11A	0.804840	2.852828e-20	3.297441e-15	4.710631e-16
8	209514_s_at	203922_s_at	AI308863	CYBB	0.802197	4.677649e-20	5.406660e-15	6.758325e-16
9	222294_s_at	240432_x_at	AI333006		0.797822	1.043850e-19	1.206534e-14	1.340593e-15
10	222294_s_at	222833_at	AU154202	LPCAT2	0.772752	7.299711e-18	8.437371e-13	8.437371e-14
11	235766_x_at	212363_x_at	AU145192	ACTG1	0.769610	1.196552e-17	1.383034e-12	1.257304e-13
12	235766_x_at	211995_x_at	AL567820	ACTG1	0.760233	4.998051e-17	5.776997e-12	4.814164e-13
13	235766_x_at	229342_at	AI708256		0.749114	2.507656e-16	2.898474e-11	2.229595e-12
14	235766_x_at	240274_at	N49720		-0.747644	3.084313e-16	3.565003e-11	2.546431e-12
15	209514_s_at	220615_s_at	NM_018099	FAR2	0.745962	3.901304e-16	4.509322e-11	3.006215e-12
16	235766_x_at	212988_x_at	AL515810	ACTG1	0.745588	4.109866e-16	4.750388e-11	2.968993e-12
17	210951_x_at	220615_s_at	NM_018099	FAR2	0.739939	8.919484e-16	1.030959e-10	6.064462e-12
18	235766_x_at	201550_x_at	NM_001614	ACTG1	0.739242	9.799605e-16	1.132687e-10	6.292708e-12
19	235766_x_at	212435_at	AA205593	TRIM33	0.733141	2.207753e-15	2.551831e-10	1.343069e-11
20	222294_s_at	227040_at	AI655763	NHLRC3	0.731305	2.806721e-15	3.244148e-10	1.622074e-11
21	210951_x_at	1552264_a_at	NM_138957	MAPK1	0.730849	2.978142e-15	3.442285e-10	1.639183e-11
22	235766_x_at	212487_at	AI673812	GPATCH8	-0.730848	2.978589e-15	3.442803e-10	1.564910e-11
23	222294_s_at	225984_at	AI810497	PRKAA1	0.729744	3.436789e-15	3.972413e-10	1.727136e-11
24	235766_x_at	231616_at	T72620		-0.728031	4.285424e-15	4.953307e-10	2.063878e-11
25	210951_x_at	208351_s_at	NM_002745	MAPK1	0.726449	5.246746e-15	6.064451e-10	2.425780e-11
26	209514_s_at	1552264_a_at	NM_138957	MAPK1	0.722381	8.771267e-15	1.013827e-9	3.899334e-11
27	235766_x_at	205786_s_at	NM_000632	ITGAM	0.721984	9.216964e-15	1.065343e-9	3.945714e-11
28	235766_x_at	228812_at	AI652899		0.720696	1.082259e-14	1.250929e-9	4.467603e-11
29	235766_x_at	235623_at	BF526230	ELP2	-0.719798	1.209827e-14	1.398378e-9	4.821995e-11
30	235766_x_at	239872_at	AW302848		-0.719583	1.242388e-14	1.436014e-9	4.786712e-11
31	222294_s_at	202228_s_at	NM_017455	NPTN	0.719336	1.280880e-14	1.480505e-9	4.775824e-11
32	222294_s_at	201218_at	N23018	CTBP2	0.719164	1.308413e-14	1.512330e-9	4.726030e-11
33	222294_s_at	212536_at	AB023173	ATP11B	0.718545	1.412169e-14	1.632256e-9	4.946229e-11
34	222294_s_at	205027_s_at	NM_005204	MAP3K8	0.718164	1.480069e-14	1.710738e-9	5.031581e-11
35	222294_s_at	209130_at	BC003686	SNAP23	0.716716	1.767419e-14	2.042871e-9	5.836775e-11
36	209514_s_at	208351_s_at	NM_002745	MAPK1	0.715442	2.064258e-14	2.385973e-9	6.627703e-11
37	235766_x_at	225231_at	AI828967	CBL	0.713358	2.656230e-14	3.070204e-9	8.297848e-11
38	222294_s_at	239346_at	AI097560		0.711358	3.376350e-14	3.902554e-9	1.026988e-10
39	235766_x_at	239355_at	BF675979		0.711303	3.398566e-14	3.928233e-9	1.007239e-10
40	235766_x_at	204181_s_at	T90308	ZBTB43	-0.710116	3.914533e-14	4.524613e-9	1.131153e-10
41	209514_s_at	1555407_s_at	BC032232	FGD3	0.709924	4.004762e-14	4.628904e-9	1.129001e-10
42	235766_x_at	200738_s_at	NM_000291	PGK1	0.709872	4.029342e-14	4.657315e-9	1.108885e-10
43	235766_x_at	201301_s_at	BC000182	ANXA4	0.707153	5.554175e-14	6.419793e-9	1.492975e-10
44	235766_x_at	211963_s_at	AL516350	ARPC5	0.705773	6.527484e-14	7.544792e-9	1.714726e-10
45	209514_s_at	1553709_a_at	NM_032284	PRPF38A	0.705623	6.642353e-14	7.677564e-9	1.706125e-10
46	235766_x_at	200958_s_at	NM_005625	SDCBP	0.704872	7.249285e-14	8.379086e-9	1.821540e-10
47	235766_x_at	225988_at	AI819938	HERC4	0.704225	7.815144e-14	9.033135e-9	1.921944e-10
48	235766_x_at	202124_s_at	AV705253	TRAK2	-0.703780	8.228138e-14	9.510493e-9	1.981353e-10
49	222294_s_at	212526_at	AK002207	SPG20	0.703282	8.715044e-14	1.007328e-8	2.055772e-10
50	235766_x_at	232843_s_at	AL161725	DOCK8	0.703034	8.968600e-14	1.036636e-8	2.073271e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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