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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6413	208371_s_at	NM_002931	RING1		ring finger protein 1
22476	35685_at	AL031228	RING1		ring finger protein 1

Fetching correlation data, please wait...
Getting list of correlations for id 6413.
Getting list of p-values for id 6413.
1 of 2 done.
Getting list of correlations for id 22476.
Getting list of p-values for id 22476.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.192 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208371_s_at	35685_at	AL031228	RING1	0.851261	1.115163e-24	5.155842e-20	5.155842e-20
2	35685_at	208371_s_at	NM_002931	RING1	0.851261	1.115163e-24	5.155842e-20	2.577921e-20
3	35685_at	203900_at	NM_024547	KIAA0467	0.769026	1.310653e-17	6.059675e-13	2.019892e-13
4	35685_at	210023_s_at	BC004952	PCGF1	0.761125	4.375222e-17	2.022840e-12	5.057100e-13
5	208371_s_at	212359_s_at	W89120	KIAA0913	0.749274	2.451735e-16	1.133535e-11	2.267070e-12
6	208371_s_at	219988_s_at	NM_018150	RNF220	0.723717	7.416416e-15	3.428906e-10	5.714843e-11
7	35685_at	212359_s_at	W89120	KIAA0913	0.720496	1.109420e-14	5.129292e-10	7.327560e-11
8	208371_s_at	225947_at	AA994178	MYO19	0.708064	4.990067e-14	2.307108e-9	2.883885e-10
9	208371_s_at	203900_at	NM_024547	KIAA0467	0.706010	6.349355e-14	2.935561e-9	3.261734e-10
10	35685_at	202891_at	NM_005600	NIT1	0.703993	8.027453e-14	3.711413e-9	3.711413e-10
11	208371_s_at	217918_at	NM_014183	DYNLRB1	0.703521	8.478379e-14	3.919894e-9	3.563540e-10
12	208371_s_at	224447_s_at	BC006006	C17orf37	0.703111	8.889588e-14	4.110012e-9	3.425010e-10
13	208371_s_at	200000_s_at	NM_006445	PRPF8	0.701859	1.026741e-13	4.747033e-9	3.651564e-10
14	208371_s_at	202891_at	NM_005600	NIT1	0.701301	1.094584e-13	5.060698e-9	3.614784e-10
15	208371_s_at	205423_at	NM_001127	AP1B1	0.690906	3.510720e-13	1.623147e-8	1.082098e-9
16	208371_s_at	210417_s_at	U81802	PI4KB	0.686732	5.530096e-13	2.556784e-8	1.597990e-9
17	35685_at	201281_at	NM_007002	ADRM1	0.685987	5.993062e-13	2.770832e-8	1.629901e-9
18	208371_s_at	233563_s_at	AK023356	CPSF3L	0.682852	8.380457e-13	3.874620e-8	2.152567e-9
19	35685_at	227042_at	BE218514	YDJC	0.680681	1.054541e-12	4.875567e-8	2.566088e-9
20	208371_s_at	228009_x_at	NM_014596	ZNRD1	0.676721	1.595638e-12	7.377271e-8	3.688635e-9
21	35685_at	225529_at	AI492175	ACAP3	0.676525	1.628400e-12	7.528743e-8	3.585116e-9
22	208371_s_at	55093_at	AA534198	CHPF2	0.676100	1.701826e-12	7.868223e-8	3.576465e-9
23	208371_s_at	210023_s_at	BC004952	PCGF1	0.674809	1.944556e-12	8.990459e-8	3.908895e-9
24	35685_at	210428_s_at	AF260566	HGS	0.673791	2.158924e-12	9.981569e-8	4.158987e-9
25	208371_s_at	201077_s_at	AF155235	NHP2L1	0.671620	2.695168e-12	1.246084e-7	4.984337e-9
26	208371_s_at	214736_s_at	BE898639	ADD1	0.671584	2.704974e-12	1.250618e-7	4.810068e-9
27	208371_s_at	202996_at	NM_021173	POLD4	0.669939	3.196049e-12	1.477661e-7	5.472819e-9
28	35685_at	200000_s_at	NM_006445	PRPF8	0.669534	3.329495e-12	1.539359e-7	5.497709e-9
29	208371_s_at	200747_s_at	NM_006185	NUMA1	0.668065	3.860245e-12	1.784746e-7	6.154296e-9
30	35685_at	218148_at	NM_025082	CENPT	0.667472	4.096387e-12	1.893924e-7	6.313079e-9
31	35685_at	205423_at	NM_001127	AP1B1	0.666943	4.319092e-12	1.996889e-7	6.441578e-9
32	35685_at	212083_at	BG170659	TEX261	0.665967	4.760834e-12	2.201124e-7	6.878513e-9
33	208371_s_at	209826_at	AF020544		0.665242	5.116533e-12	2.365578e-7	7.168418e-9
34	35685_at	226076_s_at	AI174548	MBD6	0.663263	6.222668e-12	2.876988e-7	8.461731e-9
35	208371_s_at	201770_at	NM_004596	SNRPA	0.663258	6.226180e-12	2.878612e-7	8.224607e-9
36	208371_s_at	212156_at	AA812224	VPS39	0.661290	7.552527e-12	3.491835e-7	9.699543e-9
37	35685_at	202621_at	NM_001571	IRF3	0.657597	1.081179e-11	4.998722e-7	1.351006e-8
38	208371_s_at	223639_s_at	AF230337	ZNRD1	0.657586	1.082303e-11	5.003919e-7	1.316821e-8
39	208371_s_at	243916_x_at	H73636	UBLCP1	-0.657143	1.129466e-11	5.221971e-7	1.338967e-8
40	35685_at	37796_at	AF053356	LRCH4	0.657134	1.130472e-11	5.226622e-7	1.306656e-8
41	35685_at	200948_at	NM_005439	MLF2	0.656662	1.182983e-11	5.469403e-7	1.334001e-8
42	35685_at	214585_s_at	AL390171	VPS52	0.656193	1.237481e-11	5.721371e-7	1.362231e-8
43	35685_at	233563_s_at	AK023356	CPSF3L	0.655760	1.289960e-11	5.963999e-7	1.386977e-8
44	35685_at	32209_at	AF052151	FAM89B	0.654945	1.394554e-11	6.447581e-7	1.465359e-8
45	35685_at	218914_at	NM_015997	C1orf66	0.654470	1.459147e-11	6.746222e-7	1.499161e-8
46	35685_at	212512_s_at	AA551784	CARM1	0.653973	1.529857e-11	7.073142e-7	1.537640e-8
47	35685_at	200747_s_at	NM_006185	NUMA1	0.653245	1.639369e-11	7.579460e-7	1.612651e-8
48	35685_at	211730_s_at	BC005903	POLR2L	0.652754	1.717617e-11	7.941229e-7	1.654423e-8
49	208371_s_at	217949_s_at	NM_024006	VKORC1	0.650874	2.051068e-11	9.482909e-7	1.935288e-8
50	208371_s_at	221432_s_at	NM_031212	SLC25A28	0.650153	2.194812e-11	1.014749e-6	2.029499e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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