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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 4 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
3911	203107_x_at	NM_002952	RPS2		ribosomal protein S2
8730	212433_x_at	AA630314	RPS2		ribosomal protein S2
10952	217466_x_at	L48784	RPS2		ribosomal protein S2
13290	221798_x_at	AI183766	RPS2		ribosomal protein S2

Fetching correlation data, please wait...
Getting list of correlations for id 3911.
Getting list of p-values for id 3911.
1 of 4 done.
Getting list of correlations for id 8730.
Getting list of p-values for id 8730.
2 of 4 done.
Getting list of correlations for id 10952.
Getting list of p-values for id 10952.
3 of 4 done.
Getting list of correlations for id 13290.
Getting list of p-values for id 13290.
4 of 4 done.
Calculating corrections for multiple testing (n=92468), please wait...
Done; whole program took 0.341 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	212433_x_at	203107_x_at	NM_002952	RPS2	0.923077	8.906512e-36	8.235674e-31	8.235674e-31
2	203107_x_at	212433_x_at	AA630314	RPS2	0.923077	8.906512e-36	8.235674e-31	4.117837e-31
3	203107_x_at	201114_x_at	NM_002792	PSMA7	0.701227	1.103817e-13	1.020677e-8	3.402258e-9
4	203107_x_at	1557203_at	BC041956	PABPC1L2B	0.698313	1.537973e-13	1.422133e-8	3.555332e-9
5	203107_x_at	201682_at	NM_004279	PMPCB	0.694172	2.447155e-13	2.262835e-8	4.525671e-9
6	217466_x_at	201317_s_at	NM_002787	PSMA2	0.688474	4.579176e-13	4.234273e-8	7.057121e-9
7	212433_x_at	1557203_at	BC041956	PABPC1L2B	0.686971	5.389218e-13	4.983302e-8	7.119003e-9
8	217466_x_at	1557203_at	BC041956	PABPC1L2B	0.673555	2.211966e-12	2.045361e-7	2.556701e-8
9	212433_x_at	217466_x_at	L48784	RPS2	0.671332	2.775336e-12	2.566298e-7	2.851442e-8
10	217466_x_at	212433_x_at	AA630314	RPS2	0.671332	2.775336e-12	2.566298e-7	2.566298e-8
11	212433_x_at	200022_at	NM_000979	RPL18	0.670629	2.980621e-12	2.756120e-7	2.505564e-8
12	203107_x_at	200022_at	NM_000979	RPL18	0.669741	3.260867e-12	3.015259e-7	2.512716e-8
13	212433_x_at	201114_x_at	NM_002792	PSMA7	0.666722	4.415329e-12	4.082767e-7	3.140590e-8
14	217466_x_at	203107_x_at	NM_002952	RPS2	0.659600	8.905314e-12	8.234566e-7	5.881833e-8
15	203107_x_at	217466_x_at	L48784	RPS2	0.659600	8.905314e-12	8.234566e-7	5.489711e-8
16	221798_x_at	1552863_a_at	NM_145815	CACNG6	-0.659050	9.393715e-12	8.686180e-7	5.428863e-8
17	217466_x_at	209134_s_at	BC000524	RPS6	0.657174	1.126082e-11	1.041265e-6	6.125090e-8
18	221798_x_at	212429_s_at	AW194657	GTF3C2	0.650423	2.139867e-11	1.978692e-6	1.099274e-7
19	221798_x_at	209116_x_at	M25079	HBB	0.649410	2.353005e-11	2.175777e-6	1.145146e-7
20	212433_x_at	201682_at	NM_004279	PMPCB	0.645830	3.281751e-11	3.034570e-6	1.517285e-7
21	217466_x_at	209651_at	BC001830	TGFB1I1	-0.644001	3.883363e-11	3.590868e-6	1.709937e-7
22	221798_x_at	202691_at	NM_006938	SNRPD1	0.643949	3.901674e-11	3.607800e-6	1.639909e-7
23	221798_x_at	217957_at	NM_013242	C16orf80	0.642496	4.456125e-11	4.120489e-6	1.791517e-7
24	221798_x_at	202294_at	AI126490	STAG1	0.642150	4.599096e-11	4.252692e-6	1.771955e-7
25	203107_x_at	221475_s_at	NM_002948	RPL15	0.637152	7.220339e-11	6.676503e-6	2.670601e-7
26	203107_x_at	218133_s_at	NM_021824	NIF3L1	0.636188	7.869412e-11	7.276688e-6	2.798726e-7
27	217466_x_at	221952_x_at	AB037814	TRMT5	0.634604	9.058993e-11	8.376670e-6	3.102470e-7
28	217466_x_at	234512_x_at	AL136226	RPL7A	0.633525	9.965520e-11	9.214917e-6	3.291042e-7
29	203107_x_at	201592_at	NM_003756	EIF3H	0.632565	1.084560e-10	1.002871e-5	3.458175e-7
30	217466_x_at	205036_at	NM_007080	LSM6	0.632391	1.101282e-10	1.018334e-5	3.394445e-7
31	221798_x_at	210792_x_at	AF033111	SIVA1	0.631970	1.142752e-10	1.056680e-5	3.408644e-7
32	221798_x_at	204366_s_at	NM_001521	GTF3C2	0.629971	1.361163e-10	1.258640e-5	3.933250e-7
33	217466_x_at	228353_x_at	AA233308	UBASH3B	0.629783	1.383531e-10	1.279324e-5	3.876739e-7
34	203107_x_at	208697_s_at	BC000734	EIF3E	0.628245	1.581338e-10	1.462232e-5	4.300681e-7
35	217466_x_at	223559_s_at	AF161411	C9orf80	0.625815	1.949935e-10	1.803066e-5	5.151617e-7
36	203107_x_at	224930_x_at	BE559788	RPL7A	0.625451	2.011879e-10	1.860345e-5	5.167624e-7
37	212433_x_at	218133_s_at	NM_021824	NIF3L1	0.621490	2.818919e-10	2.606598e-5	7.044860e-7
38	203107_x_at	201274_at	NM_002790	PSMA5	0.619880	3.228633e-10	2.985452e-5	7.856452e-7
39	203107_x_at	223048_at	BC002331	SDHAF2	0.617829	3.833712e-10	3.544957e-5	9.089633e-7
40	217466_x_at	222229_x_at	AL121871	RPL26	0.616409	4.314930e-10	3.989929e-5	9.974823e-7
41	221798_x_at	219111_s_at	NM_024072	DDX54	0.616314	4.348959e-10	4.021395e-5	9.808281e-7
42	217466_x_at	233168_s_at	BC001099	SELO	-0.615439	4.676195e-10	4.323984e-5	1.029520e-6
43	221798_x_at	224636_at	AL045405		0.614929	4.877608e-10	4.510227e-5	1.048890e-6
44	203107_x_at	200082_s_at	AI805587	RPS7	0.614825	4.919802e-10	4.549242e-5	1.033919e-6
45	203107_x_at	208856_x_at	BC003655	RPLP0	0.614525	5.043281e-10	4.663421e-5	1.036316e-6
46	212433_x_at	201274_at	NM_002790	PSMA5	0.614189	5.184654e-10	4.794146e-5	1.042206e-6
47	221798_x_at	235116_at	AA922208	TRAF1	-0.613655	5.417689e-10	5.009628e-5	1.065878e-6
48	212433_x_at	201198_s_at	AI860431	PSMD1	0.610555	6.981511e-10	6.455663e-5	1.344930e-6
49	221798_x_at	230656_s_at	AL578336	CIRH1A	0.610525	6.998732e-10	6.471587e-5	1.320732e-6
50	212433_x_at	200082_s_at	AI805587	RPS7	0.609677	7.497850e-10	6.933112e-5	1.386622e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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