[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5193	204906_at	BC002363	RPS6KA2		ribosomal protein S6 kinase, 90kDa, polypeptide 2
9145	212912_at	AI992251	RPS6KA2		ribosomal protein S6 kinase, 90kDa, polypeptide 2

Fetching correlation data, please wait...
Getting list of correlations for id 5193.
Getting list of p-values for id 5193.
1 of 2 done.
Getting list of correlations for id 9145.
Getting list of p-values for id 9145.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.226 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204906_at	201450_s_at	NM_022037	TIA1	-0.728237	4.173825e-15	1.929726e-10	1.929726e-10
2	212912_at	211976_at	AK026168		0.723266	7.849158e-15	3.628980e-10	1.814490e-10
3	204906_at	221191_at	NM_018991	STAG3L1	0.714688	2.262079e-14	1.045849e-9	3.486165e-10
4	204906_at	226432_at	AI276880	ETNK1	-0.712606	2.907409e-14	1.344212e-9	3.360529e-10
5	204906_at	221704_s_at	BC005882	VPS37B	0.689407	4.136808e-13	1.912612e-8	3.825224e-9
6	204906_at	41386_i_at	AB002344	KDM6B	0.686048	5.953825e-13	2.752692e-8	4.587819e-9
7	204906_at	208626_s_at	BC001913	VAT1	0.685740	6.154062e-13	2.845269e-8	4.064670e-9
8	204906_at	235103_at	AA029155	MAN2A1	-0.685572	6.266505e-13	2.897256e-8	3.621570e-9
9	204906_at	212748_at	AB037859	MKL1	0.684634	6.929970e-13	3.204002e-8	3.560003e-9
10	204906_at	208116_s_at	NM_005907	MAN1A1	-0.682983	8.264527e-13	3.821021e-8	3.821021e-9
11	212912_at	204906_at	BC002363	RPS6KA2	0.679505	1.193361e-12	5.517385e-8	5.015805e-9
12	204906_at	212912_at	AI992251	RPS6KA2	0.679505	1.193361e-12	5.517385e-8	4.597821e-9
13	204906_at	215785_s_at	AL161999	CYFIP2	0.678195	1.368812e-12	6.328567e-8	4.868129e-9
14	204906_at	214780_s_at	AK002201	MYO9B	0.677720	1.438206e-12	6.649400e-8	4.749572e-9
15	204906_at	212571_at	U00955	CHD8	0.677576	1.459931e-12	6.749844e-8	4.499896e-9
16	204906_at	213146_at	AA521267	KDM6B	0.677517	1.469036e-12	6.791943e-8	4.244965e-9
17	204906_at	237005_at	AI923935	LOC442075	0.675311	1.846443e-12	8.536844e-8	5.021673e-9
18	204906_at	207559_s_at	NM_005096	ZMYM3	0.671447	2.743063e-12	1.268228e-7	7.045710e-9
19	204906_at	218209_s_at	NM_018170	RPRD1A	-0.671160	2.824302e-12	1.305788e-7	6.872566e-9
20	204906_at	205518_s_at	NM_003570	CMAH	-0.664943	5.270458e-12	2.436744e-7	1.218372e-8
21	204906_at	212196_at	AW242916	IL6ST	-0.662430	6.754002e-12	3.122645e-7	1.486974e-8
22	204906_at	201904_s_at	BF031714	CTDSPL	0.659542	8.955760e-12	4.140606e-7	1.882094e-8
23	204906_at	1554462_a_at	AF115512	DNAJB9	-0.659454	9.033043e-12	4.176337e-7	1.815799e-8
24	204906_at	224589_at	BF223193	XIST	-0.659417	9.065575e-12	4.191378e-7	1.746408e-8
25	204906_at	225764_at	AI762695	ETV6	0.656834	1.163568e-11	5.379641e-7	2.151856e-8
26	204906_at	208925_at	AF161522	CLDND1	-0.656715	1.177019e-11	5.441828e-7	2.093011e-8
27	204906_at	1553694_a_at	NM_002645	PIK3C2A	-0.656186	1.238296e-11	5.725139e-7	2.120422e-8
28	204906_at	201448_at	AL046419	TIA1	-0.655433	1.330897e-11	6.153271e-7	2.197597e-8
29	204906_at	201151_s_at	BF512200	MBNL1	-0.653597	1.585500e-11	7.330399e-7	2.527724e-8
30	204906_at	232002_at	AW843302		0.653168	1.651445e-11	7.635292e-7	2.545097e-8
31	204906_at	220712_at	NM_024984	C8orf60	0.650814	2.062573e-11	9.536099e-7	3.076161e-8
32	204906_at	225935_at	AI350995		0.647983	2.687957e-11	1.242750e-6	3.883594e-8
33	204906_at	216294_s_at	AL137254	KIAA1109	-0.646629	3.048144e-11	1.409279e-6	4.270542e-8
34	204906_at	236625_at	AI475574		0.646143	3.188096e-11	1.473984e-6	4.335248e-8
35	204906_at	212520_s_at	AI684141	SMARCA4	0.645576	3.359557e-11	1.553257e-6	4.437878e-8
36	204906_at	201447_at	H96549	TIA1	-0.644593	3.677678e-11	1.700338e-6	4.723161e-8
37	204906_at	212633_at	AL132776	KIAA0776	-0.644509	3.706350e-11	1.713594e-6	4.631335e-8
38	204906_at	1558014_s_at	BG261090	FAR1	-0.642798	4.334971e-11	2.004231e-6	5.274291e-8
39	204906_at	228008_at	AI972511		0.641993	4.665124e-11	2.156873e-6	5.530444e-8
40	204906_at	1558447_at	BC032415		0.640386	5.397429e-11	2.495447e-6	6.238618e-8
41	204906_at	226074_at	N22918	PPM1M	0.639965	5.607067e-11	2.592372e-6	6.322858e-8
42	204906_at	204789_at	NM_005892	FMNL1	0.639809	5.686506e-11	2.629099e-6	6.259760e-8
43	204906_at	225290_at	AV692425	ETNK1	-0.639510	5.842264e-11	2.701112e-6	6.281657e-8
44	204906_at	227811_at	AK000004	FGD3	0.638803	6.226562e-11	2.878789e-6	6.542702e-8
45	204906_at	223703_at	AF267860	C10orf11	0.638658	6.308443e-11	2.916646e-6	6.481435e-8
46	204906_at	200920_s_at	AL535380	BTG1	0.637896	6.755157e-11	3.123179e-6	6.789520e-8
47	204906_at	208676_s_at	U87954	PA2G4	0.637554	6.965326e-11	3.220349e-6	6.851806e-8
48	204906_at	212720_at	AI670847	PAPOLA	-0.636810	7.444608e-11	3.441940e-6	7.170708e-8
49	204906_at	229686_at	AI436587	P2RY8	0.636622	7.570326e-11	3.500064e-6	7.142988e-8
50	204906_at	222410_s_at	AF121856	SNX6	-0.636615	7.575348e-11	3.502386e-6	7.004772e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation