[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5859	206382_s_at	NM_001709	BDNF		brain-derived neurotrophic factor

Fetching correlation data, please wait...
Getting list of correlations for id 5859.
Getting list of p-values for id 5859.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.133 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	206382_s_at	220336_s_at	AB043821	GP6	0.742584	6.220949e-16	1.438097e-11	1.438097e-11
2	206382_s_at	220496_at	NM_016509	CLEC1B	0.676315	1.664241e-12	3.847226e-8	1.923613e-8
3	206382_s_at	209049_s_at	BC001004	ZMYND8	0.644403	3.742579e-11	8.651721e-7	2.883907e-7
4	206382_s_at	1555058_a_at	BC034621	LPGAT1	0.637673	6.891104e-11	1.593017e-6	3.982541e-7
5	206382_s_at	240456_at	AA459699	ANKRD55	0.634373	9.246148e-11	2.137432e-6	4.274864e-7
6	206382_s_at	244357_at	T90760		0.634164	9.418609e-11	2.177300e-6	3.628833e-7
7	206382_s_at	211993_at	AI768512	WNK1	0.632854	1.057335e-10	2.444242e-6	3.491774e-7
8	206382_s_at	231696_x_at	AV648424		0.632729	1.069051e-10	2.471325e-6	3.089156e-7
9	206382_s_at	235999_at	AA863112		0.632633	1.078098e-10	2.492238e-6	2.769154e-7
10	206382_s_at	204842_x_at	BC002763	PRKAR2A	0.629916	1.367690e-10	3.161688e-6	3.161688e-7
11	206382_s_at	225876_at	T84558	NIPAL3	0.629280	1.445417e-10	3.341371e-6	3.037610e-7
12	206382_s_at	1566079_at	AL833001		0.624674	2.150291e-10	4.970828e-6	4.142356e-7
13	206382_s_at	212451_at	N52532	SECISBP2L	0.624094	2.259375e-10	5.222997e-6	4.017690e-7
14	206382_s_at	241133_at	AI016855	TRBV27	0.622459	2.596774e-10	6.002963e-6	4.287831e-7
15	206382_s_at	233819_s_at	AK023499	RNF160	0.619160	3.429747e-10	7.928545e-6	5.285697e-7
16	206382_s_at	202759_s_at	BE879367		-0.618099	3.748314e-10	8.664978e-6	5.415611e-7
17	206382_s_at	242531_at	H56010	RRAGC	0.615896	4.502627e-10	1.040872e-5	6.122779e-7
18	206382_s_at	237725_x_at	BE502701	SMC5	0.614508	5.050151e-10	1.167443e-5	6.485797e-7
19	206382_s_at	221705_s_at	BC005934	SIKE1	0.614229	5.167826e-10	1.194646e-5	6.287613e-7
20	206382_s_at	232097_at	AA657818	TOX4	0.611526	6.450707e-10	1.491210e-5	7.456050e-7
21	206382_s_at	232940_s_at	AK025911	MLL3	0.610952	6.759850e-10	1.562674e-5	7.441307e-7
22	206382_s_at	228986_at	AW978375	OSBPL8	0.610150	7.215588e-10	1.668027e-5	7.581943e-7
23	206382_s_at	214375_at	AI962377		0.608138	8.491977e-10	1.963090e-5	8.535175e-7
24	206382_s_at	239333_x_at	BF525633		0.607809	8.720126e-10	2.015831e-5	8.399298e-7
25	206382_s_at	213650_at	AW006438		0.606883	9.394533e-10	2.171734e-5	8.686937e-7
26	206382_s_at	220252_x_at	NM_025159	CXorf21	0.606791	9.464504e-10	2.187909e-5	8.415036e-7
27	206382_s_at	213971_s_at	AI924660		0.605585	1.042493e-9	2.409931e-5	8.925669e-7
28	206382_s_at	234199_at	AK025286		0.604404	1.145493e-9	2.648036e-5	9.457271e-7
29	206382_s_at	1555495_a_at	BC012117	CWC27	0.604334	1.151965e-9	2.662997e-5	9.182749e-7
30	206382_s_at	239040_at	AW967813	HNRNPD	0.603144	1.266164e-9	2.926992e-5	9.756641e-7
31	206382_s_at	215588_x_at	AK024958	RIOK3	0.601645	1.425541e-9	3.295422e-5	1.063039e-6
32	206382_s_at	221664_s_at	AF154005	F11R	0.601616	1.428803e-9	3.302965e-5	1.032176e-6
33	206382_s_at	207135_at	NM_000621	HTR2A	0.601245	1.471173e-9	3.400911e-5	1.030579e-6
34	206382_s_at	236620_at	AU150841	RIF1	0.600773	1.526932e-9	3.529809e-5	1.038179e-6
35	206382_s_at	203836_s_at	D84476	MAP3K5	0.600307	1.583839e-9	3.661360e-5	1.046103e-6
36	206382_s_at	212251_at	AI972475	MTDH	0.597878	1.915135e-9	4.427218e-5	1.229783e-6
37	206382_s_at	235660_at	AW970002		0.597220	2.015742e-9	4.659790e-5	1.259403e-6
38	206382_s_at	212926_at	AW183677	SMC5	0.597150	2.026678e-9	4.685072e-5	1.232914e-6
39	206382_s_at	213478_at	AB028949	KAZ	0.596522	2.127838e-9	4.918924e-5	1.261262e-6
40	206382_s_at	217715_x_at	BE045142		0.596048	2.207565e-9	5.103228e-5	1.275807e-6
41	206382_s_at	242280_x_at	N53564	CPEB4	0.595407	2.319596e-9	5.362210e-5	1.307856e-6
42	206382_s_at	216261_at	AI151479	ITGB3	0.595389	2.322900e-9	5.369849e-5	1.278535e-6
43	206382_s_at	235009_at	AI049791	BOD1L	0.594700	2.449665e-9	5.662890e-5	1.316951e-6
44	206382_s_at	222719_s_at	AB033831	PDGFC	-0.594305	2.525242e-9	5.837601e-5	1.326727e-6
45	206382_s_at	235266_at	AI139629	ATAD2	0.593995	2.586062e-9	5.978199e-5	1.328489e-6
46	206382_s_at	1554116_s_at	BC031073	PARP11	0.593977	2.589801e-9	5.986844e-5	1.301488e-6
47	206382_s_at	204993_at	NM_002073	GNAZ	0.593659	2.653703e-9	6.134566e-5	1.305227e-6
48	206382_s_at	201072_s_at	AW152160	SMARCC1	0.591530	3.123021e-9	7.219489e-5	1.504060e-6
49	206382_s_at	242094_at	AI949266		0.590627	3.345172e-9	7.733035e-5	1.578170e-6
50	206382_s_at	239474_at	AA705029		0.590620	3.346748e-9	7.736677e-5	1.547335e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation