[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4367	203666_at	NM_000609	CXCL12		chemokine (C-X-C motif) ligand 12
7361	209687_at	U19495	CXCL12		chemokine (C-X-C motif) ligand 12

Fetching correlation data, please wait...
Getting list of correlations for id 4367.
Getting list of p-values for id 4367.
1 of 2 done.
Getting list of correlations for id 7361.
Getting list of p-values for id 7361.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.195 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	209687_at	209894_at	U50748	LEPR	0.822458	8.598665e-22	3.975507e-17	3.975507e-17
2	209687_at	212230_at	AV725664	PPAP2B	0.769417	1.233079e-17	5.701018e-13	2.850509e-13
3	209687_at	204112_s_at	NM_006895	HNMT	0.757987	6.971622e-17	3.223260e-12	1.074420e-12
4	209687_at	209763_at	AL049176	CHRDL1	0.744779	4.597874e-16	2.125781e-11	5.314452e-12
5	209687_at	1555037_a_at	BC012846	IDH1	0.735081	1.709311e-15	7.902828e-11	1.580566e-11
6	209687_at	213258_at	BF511231	TFPI	0.732120	2.523568e-15	1.166746e-10	1.944577e-11
7	203666_at	204846_at	NM_000096	CP	0.731588	2.705097e-15	1.250675e-10	1.786678e-11
8	209687_at	225897_at	AI709406	MARCKS	0.728358	4.109190e-15	1.899843e-10	2.374804e-11
9	209687_at	203666_at	NM_000609	CXCL12	0.719241	1.296099e-14	5.992383e-10	6.658204e-11
10	203666_at	209687_at	U19495	CXCL12	0.719241	1.296099e-14	5.992383e-10	5.992383e-11
11	209687_at	209170_s_at	AF016004	GPM6B	0.716001	1.928561e-14	8.916509e-10	8.105917e-11
12	209687_at	201669_s_at	NM_002356	MARCKS	0.713275	2.682759e-14	1.240347e-9	1.033622e-10
13	209687_at	204846_at	NM_000096	CP	0.707187	5.532042e-14	2.557684e-9	1.967449e-10
14	209687_at	201427_s_at	NM_005410	SEPP1	0.705185	6.990064e-14	3.231786e-9	2.308419e-10
15	209687_at	211355_x_at	U52914	LEPR	0.704430	7.631468e-14	3.528333e-9	2.352222e-10
16	209687_at	215646_s_at	R94644	VCAN	0.704017	8.005122e-14	3.701088e-9	2.313180e-10
17	209687_at	212195_at	AL049265	IL6ST	0.703826	8.184537e-14	3.784039e-9	2.225905e-10
18	203666_at	209168_at	AW148844	GPM6B	0.699202	1.390529e-13	6.428974e-9	3.571652e-10
19	209687_at	224941_at	BF107618	PAPPA	0.697933	1.605371e-13	7.422273e-9	3.906459e-10
20	209687_at	228128_x_at	AI110886	PAPPA	0.694367	2.394759e-13	1.107193e-8	5.535966e-10
21	203666_at	225442_at	AI799915	DDR2	0.693356	2.679196e-13	1.238700e-8	5.898569e-10
22	209687_at	211356_x_at	U66495	LEPR	0.693225	2.718412e-13	1.256831e-8	5.712866e-10
23	209687_at	211354_s_at	U52913	LEPR	0.693187	2.730117e-13	1.262242e-8	5.488010e-10
24	209687_at	209576_at	AL049933	GNAI1	0.688504	4.564163e-13	2.110195e-8	8.792479e-10
25	209687_at	204591_at	NM_006614	CHL1	0.687483	5.099256e-13	2.357590e-8	9.430361e-10
26	209687_at	210839_s_at	D45421	ENPP2	0.686088	5.927801e-13	2.740659e-8	1.054100e-9
27	209687_at	220161_s_at	NM_019114	EPB41L4B	0.685965	6.007342e-13	2.777434e-8	1.028679e-9
28	209687_at	206496_at	NM_006894	FMO3	0.684147	7.300228e-13	3.375187e-8	1.205424e-9
29	203666_at	211355_x_at	U52914	LEPR	0.681804	9.366347e-13	4.330437e-8	1.493254e-9
30	209687_at	209109_s_at	U84895	TSPAN6	0.681525	9.646315e-13	4.459877e-8	1.486626e-9
31	203666_at	212230_at	AV725664	PPAP2B	0.679295	1.219966e-12	5.640390e-8	1.819481e-9
32	209687_at	223620_at	AF039686	GPR34	0.679230	1.228318e-12	5.679005e-8	1.774689e-9
33	209687_at	201988_s_at	BF438056	CREBL2	0.677947	1.404685e-12	6.494420e-8	1.968006e-9
34	209687_at	222410_s_at	AF121856	SNX6	0.674846	1.937090e-12	8.955944e-8	2.634101e-9
35	209687_at	205430_at	AL133386	BMP5	0.673793	2.158596e-12	9.980052e-8	2.851443e-9
36	209687_at	204042_at	AB020707	WASF3	0.672686	2.417663e-12	1.117782e-7	3.104951e-9
37	209687_at	206331_at	NM_005795	CALCRL	0.671086	2.845406e-12	1.315545e-7	3.555527e-9
38	203666_at	203372_s_at	AB004903	SOCS2	0.667452	4.104545e-12	1.897695e-7	4.993935e-9
39	203666_at	211356_x_at	U66495	LEPR	0.667135	4.236957e-12	1.958915e-7	5.022859e-9
40	209687_at	209612_s_at	M24317	ADH1B	0.665862	4.810830e-12	2.224239e-7	5.560598e-9
41	209687_at	203414_at	NM_012329	MMD	0.665732	4.873476e-12	2.253203e-7	5.495616e-9
42	209687_at	209348_s_at	AF055376	MAF	0.665022	5.229375e-12	2.417749e-7	5.756546e-9
43	209687_at	228143_at	AI684991	CP	0.663899	5.844529e-12	2.702159e-7	6.284092e-9
44	203666_at	1557954_at	BM757251	TXLNG	0.662856	6.477240e-12	2.994687e-7	6.806108e-9
45	203666_at	225897_at	AI709406	MARCKS	0.662313	6.832626e-12	3.158996e-7	7.019992e-9
46	209687_at	205498_at	NM_000163	GHR	0.660386	8.249695e-12	3.814164e-7	8.291661e-9
47	209687_at	218901_at	NM_020353	PLSCR4	0.658794	9.629963e-12	4.452317e-7	9.473015e-9
48	203666_at	210839_s_at	D45421	ENPP2	0.658735	9.685038e-12	4.477780e-7	9.328709e-9
49	203666_at	211354_s_at	U52913	LEPR	0.658513	9.895296e-12	4.574991e-7	9.336716e-9
50	209687_at	1554462_a_at	AF115512	DNAJB9	0.657856	1.054412e-11	4.874970e-7	9.749940e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation