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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 4 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
3075	202104_s_at	NM_003119	SPG7		spastic paraplegia 7 (pure and complicated autosomal recessive)
10038	214494_s_at	NM_005200	SPG7		spastic paraplegia 7 (pure and complicated autosomal recessive)
18691	230884_s_at	BE670386	SPG7		spastic paraplegia 7 (pure and complicated autosomal recessive)
18692	230885_at	BE670386	SPG7		spastic paraplegia 7 (pure and complicated autosomal recessive)

Fetching correlation data, please wait...
Getting list of correlations for id 3075.
Getting list of p-values for id 3075.
1 of 4 done.
Getting list of correlations for id 10038.
Getting list of p-values for id 10038.
2 of 4 done.
Getting list of correlations for id 18691.
Getting list of p-values for id 18691.
3 of 4 done.
Getting list of correlations for id 18692.
Getting list of p-values for id 18692.
4 of 4 done.
Calculating corrections for multiple testing (n=92468), please wait...
Done; whole program took 0.376 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	214494_s_at	222999_s_at	AF251294	CCNL2	0.861983	6.496338e-26	6.007033e-21	6.007033e-21
2	230885_at	212451_at	N52532	SECISBP2L	0.826354	3.761735e-22	3.478401e-17	1.739201e-17
3	230885_at	208987_s_at	AK024505	KDM2A	0.818486	1.956954e-21	1.809556e-16	6.031854e-17
4	230885_at	235660_at	AW970002		0.814159	4.687341e-21	4.334290e-16	1.083573e-16
5	230885_at	215032_at	AK022442	RREB1	0.811601	7.772127e-21	7.186731e-16	1.437346e-16
6	230885_at	230494_at	AI671885	SLC20A1	0.809689	1.128415e-20	1.043423e-15	1.739038e-16
7	202104_s_at	215482_s_at	AJ011307	EIF2B4	0.801852	4.987252e-20	4.611612e-15	6.588018e-16
8	230885_at	242233_at	AI739332		0.796619	1.297020e-19	1.199328e-14	1.499160e-15
9	230885_at	1555913_at	AK098734	GON4L	0.794618	1.855779e-19	1.716001e-14	1.906668e-15
10	230885_at	222728_s_at	AF275800	TAF1D	0.794339	1.950208e-19	1.803318e-14	1.803318e-15
11	230885_at	242068_at	AA608834		0.793606	2.220680e-19	2.053419e-14	1.866744e-15
12	230885_at	228408_s_at	AI738666	SDAD1	0.793534	2.249064e-19	2.079665e-14	1.733054e-15
13	230885_at	216211_at	AL049233		0.790352	3.930116e-19	3.634099e-14	2.795461e-15
14	230885_at	213650_at	AW006438		0.789646	4.442782e-19	4.108152e-14	2.934394e-15
15	230885_at	1558515_at	AK057701	NCRNA00182	0.788675	5.253791e-19	4.858075e-14	3.238717e-15
16	230885_at	238894_at	AW665144		0.788388	5.520081e-19	5.104309e-14	3.190193e-15
17	230885_at	212926_at	AW183677	SMC5	0.788375	5.533023e-19	5.116276e-14	3.009574e-15
18	230885_at	1552302_at	NM_145041	TMEM106A	0.782401	1.521364e-18	1.406775e-13	7.815414e-15
19	230885_at	238738_at	AW361702	PSMD7	0.782092	1.601510e-18	1.480884e-13	7.794125e-15
20	230885_at	210109_at	AF191492	C7orf54	0.781469	1.776389e-18	1.642591e-13	8.212957e-15
21	230885_at	232940_s_at	AK025911	MLL3	0.780471	2.095087e-18	1.937285e-13	9.225167e-15
22	230885_at	230256_at	AW009436	C1orf104	0.779907	2.299030e-18	2.125867e-13	9.663033e-15
23	202104_s_at	214494_s_at	NM_005200	SPG7	0.776842	3.790727e-18	3.505209e-13	1.524004e-14
24	214494_s_at	202104_s_at	NM_003119	SPG7	0.776842	3.790727e-18	3.505209e-13	1.460504e-14
25	230885_at	1554116_s_at	BC031073	PARP11	0.776175	4.222436e-18	3.904402e-13	1.561761e-14
26	230885_at	233674_at	AK026286		0.775489	4.715846e-18	4.360648e-13	1.677172e-14
27	230885_at	244292_at	AL119491		0.773744	6.234844e-18	5.765235e-13	2.135272e-14
28	230885_at	201606_s_at	BE796924	PWP1	0.773279	6.714410e-18	6.208680e-13	2.217386e-14
29	230885_at	235009_at	AI049791	BOD1L	0.773215	6.782698e-18	6.271825e-13	2.162698e-14
30	202104_s_at	215460_x_at	AL080149	BRD1	0.772356	7.772114e-18	7.186718e-13	2.395573e-14
31	230885_at	228986_at	AW978375	OSBPL8	0.771227	9.287317e-18	8.587796e-13	2.770257e-14
32	230885_at	220609_at	NM_024651	LOC202181	0.770652	1.016545e-17	9.399787e-13	2.937433e-14
33	230885_at	1565823_at	BF855173	SEPT7	0.769950	1.134765e-17	1.049295e-12	3.179681e-14
34	230885_at	243578_at	AW293956		0.769895	1.144542e-17	1.058335e-12	3.112750e-14
35	214494_s_at	218505_at	NM_024673	WDR59	0.769527	1.212127e-17	1.120830e-12	3.202371e-14
36	214494_s_at	208774_at	AV700224	CSNK1D	0.769006	1.314661e-17	1.215641e-12	3.376780e-14
37	230885_at	232012_at	AV691296	CAPN1	0.768348	1.456196e-17	1.346516e-12	3.639231e-14
38	202104_s_at	218307_at	NM_018346	RSAD1	0.767582	1.639272e-17	1.515802e-12	3.988952e-14
39	230885_at	231495_at	AA744508		0.766889	1.824134e-17	1.686740e-12	4.324975e-14
40	230885_at	237943_at	AI820802		0.766088	2.063178e-17	1.907779e-12	4.769448e-14
41	214494_s_at	224804_s_at	AU152410	C15orf17	0.765966	2.102153e-17	1.943818e-12	4.741020e-14
42	202104_s_at	217902_s_at	NM_004667	HERC2	0.765841	2.142816e-17	1.981419e-12	4.717665e-14
43	202104_s_at	225191_at	AL565767	CIRBP	0.765337	2.314386e-17	2.140066e-12	4.976898e-14
44	230885_at	212596_s_at	AJ010070	HMGXB4	0.765117	2.393441e-17	2.213167e-12	5.029926e-14
45	230885_at	215545_at	AK024185		0.764975	2.445705e-17	2.261495e-12	5.025544e-14
46	230885_at	239571_at	AI123399		0.764515	2.623224e-17	2.425643e-12	5.273137e-14
47	202104_s_at	211928_at	AB002323	DYNC1H1	0.764398	2.670569e-17	2.469422e-12	5.254089e-14
48	214494_s_at	201591_s_at	NM_007184	NISCH	0.764391	2.673433e-17	2.472070e-12	5.150147e-14
49	230885_at	212000_at	AB002363	SUGP2	0.763767	2.938672e-17	2.717331e-12	5.545574e-14
50	230885_at	208993_s_at	AW340788	PPIG	0.762905	3.348149e-17	3.095966e-12	6.191932e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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