[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5539	205557_at	NM_001725	BPI		bactericidal/permeability-increasing protein

Fetching correlation data, please wait...
Getting list of correlations for id 5539.
Getting list of p-values for id 5539.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.122 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205557_at	226789_at	W84421	EMB	0.564383	2.254577e-8	5.211905e-4	5.211905e-4
2	205557_at	202119_s_at	NM_003909	CPNE3	0.548579	6.581021e-8	1.521335e-3	7.606673e-4
3	205557_at	223234_at	AF080398	MAD2L2	0.540550	1.110739e-7	2.567695e-3	8.558983e-4
4	205557_at	210027_s_at	M80261	APEX1	0.536633	1.426790e-7	3.298310e-3	8.245774e-4
5	205557_at	203757_s_at	BC005008	CEACAM6	0.536221	1.464601e-7	3.385717e-3	6.771435e-4
6	205557_at	204513_s_at	NM_014800	ELMO1	0.535871	1.497476e-7	3.461715e-3	5.769525e-4
7	205557_at	200953_s_at	NM_001759	CCND2	0.534401	1.643279e-7	3.798767e-3	5.426810e-4
8	205557_at	1552617_a_at	NM_022457	RFWD2	0.533271	1.764454e-7	4.078887e-3	5.098609e-4
9	205557_at	242520_s_at	AW511110	C1orf228	0.522493	3.433382e-7	7.936948e-3	8.818832e-4
10	205557_at	212549_at	BE645861	STAT5B	0.519146	4.202202e-7	9.714232e-3	9.714232e-4
11	205557_at	207384_at	NM_005091	PGLYRP1	0.518928	4.257596e-7	9.842286e-3	8.947532e-4
12	205557_at	211251_x_at	U78774	NFYC	0.515291	5.289475e-7	1.222768e-2	1.018973e-3
13	205557_at	201720_s_at	AI589086	LAPTM5	0.512747	6.147419e-7	1.421099e-2	1.093153e-3
14	205557_at	200057_s_at	NM_007363	NONO	0.510963	6.825563e-7	1.577865e-2	1.127047e-3
15	205557_at	209201_x_at	L01639	CXCR4	0.510556	6.990004e-7	1.615879e-2	1.077253e-3
16	205557_at	207341_at	NM_002777	PRTN3	0.509727	7.336613e-7	1.696005e-2	1.060003e-3
17	205557_at	1554963_at	BC033959		-0.509076	7.619903e-7	1.761493e-2	1.036172e-3
18	205557_at	204192_at	NM_001774	CD37	0.507749	8.229655e-7	1.902449e-2	1.056916e-3
19	205557_at	211919_s_at	AF348491	CXCR4	0.505460	9.391806e-7	2.171104e-2	1.142686e-3
20	205557_at	202431_s_at	NM_002467	MYC	0.504563	9.888140e-7	2.285841e-2	1.142921e-3
21	205557_at	227678_at	AI628122	XRCC6BP1	0.503170	1.070861e-6	2.475510e-2	1.178814e-3
22	205557_at	220615_s_at	NM_018099	FAR2	0.502721	1.098603e-6	2.539640e-2	1.154382e-3
23	205557_at	204951_at	NM_004310	RHOH	0.500671	1.234306e-6	2.853345e-2	1.240585e-3
24	205557_at	204478_s_at	NM_002871	RABIF	0.500583	1.240464e-6	2.867580e-2	1.194825e-3
25	205557_at	209269_s_at	AW450910	SYK	0.500500	1.246281e-6	2.881027e-2	1.152411e-3
26	205557_at	210470_x_at	BC003129	NONO	0.500351	1.256876e-6	2.905520e-2	1.117508e-3
27	205557_at	201401_s_at	M80776	ADRBK1	0.500245	1.264414e-6	2.922946e-2	1.082572e-3
28	205557_at	1564494_s_at	AK075503	P4HB	0.498014	1.433756e-6	3.314414e-2	1.183719e-3
29	205557_at	200068_s_at	M94859	CANX	0.497800	1.451141e-6	3.354603e-2	1.156760e-3
30	205557_at	201118_at	NM_002631	PGD	0.494580	1.736878e-6	4.015142e-2	1.338381e-3
31	205557_at	230722_at	AI377043	BNC2	-0.493255	1.869191e-6	4.321009e-2	1.393874e-3
32	205557_at	201894_s_at	NM_001920		0.493170	1.878060e-6	4.341511e-2	1.356722e-3
33	205557_at	223892_s_at	AF182414	TMBIM4	0.490549	2.169654e-6	5.015590e-2	1.519876e-3
34	205557_at	212178_s_at	AK022555		0.489651	2.278974e-6	5.268304e-2	1.549501e-3
35	205557_at	225431_x_at	BE779764	PM20D2	-0.489115	2.346669e-6	5.424795e-2	1.549941e-3
36	205557_at	201698_s_at	NM_003769	SRSF9	0.483837	3.122855e-6	7.219104e-2	2.005307e-3
37	205557_at	211299_s_at	BC003683	FLOT2	0.481312	3.574283e-6	8.262670e-2	2.233154e-3
38	205557_at	1555736_a_at	AF165187	AGTRAP	0.480935	3.646859e-6	8.430444e-2	2.218538e-3
39	205557_at	244698_at	AW297656		0.480809	3.671279e-6	8.486895e-2	2.176127e-3
40	205557_at	218059_at	NM_016096	ZNF706	0.480639	3.704641e-6	8.564019e-2	2.141005e-3
41	205557_at	211202_s_at	AF087481	KDM5B	0.480343	3.763432e-6	8.699927e-2	2.121933e-3
42	205557_at	203948_s_at	J02694	MPO	0.479596	3.915443e-6	9.051330e-2	2.155079e-3
43	205557_at	226391_at	AW271788		0.479442	3.947638e-6	9.125756e-2	2.122269e-3
44	205557_at	225750_at	BE966748		0.476985	4.493747e-6	1.038819e-1	2.360953e-3
45	205557_at	218749_s_at	NM_024959	SLC24A6	0.476932	4.506298e-6	1.041721e-1	2.314935e-3
46	205557_at	222977_at	AL518882	SURF4	0.476821	4.532789e-6	1.047845e-1	2.277924e-3
47	205557_at	212015_x_at	BF690062	PTBP1	0.475728	4.800082e-6	1.109635e-1	2.360925e-3
48	205557_at	238704_at	BF245243		0.475628	4.825149e-6	1.115430e-1	2.323812e-3
49	205557_at	202736_s_at	AA112507	LSM4	0.472151	5.782150e-6	1.336660e-1	2.727877e-3
50	205557_at	213915_at	NM_005601	NKG7	0.471728	5.910135e-6	1.366246e-1	2.732492e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation