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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6176	207554_x_at	NM_001060	TBXA2R		thromboxane A2 receptor
22444	336_at	D38081	TBXA2R		thromboxane A2 receptor

Fetching correlation data, please wait...
Getting list of correlations for id 6176.
Getting list of p-values for id 6176.
1 of 2 done.
Getting list of correlations for id 22444.
Getting list of p-values for id 22444.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.162 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	336_at	204993_at	NM_002073	GNAZ	0.637542	6.972612e-11	3.223717e-6	3.223717e-6
2	336_at	228802_at	BE348466	RBPMS2	0.637002	7.317685e-11	3.383259e-6	1.691629e-6
3	336_at	204081_at	NM_006176	NRGN	0.631480	1.192925e-10	5.515368e-6	1.838456e-6
4	336_at	211005_at	AF036906		0.618152	3.731830e-10	1.725374e-5	4.313435e-6
5	336_at	206493_at	NM_000419	ITGA2B	0.615064	4.823767e-10	2.230220e-5	4.460441e-6
6	336_at	221984_s_at	AL040896	FAM134A	0.610378	7.083077e-10	3.274790e-5	5.457983e-6
7	336_at	43544_at	AA314406	MED16	0.609130	7.837483e-10	3.623582e-5	5.176546e-6
8	336_at	208713_at	BF724216	HNRNPUL1	0.606843	9.425275e-10	4.357682e-5	5.447102e-6
9	336_at	210169_at	AB007880	SEC14L5	0.603861	1.196134e-9	5.530208e-5	6.144675e-6
10	336_at	40016_g_at	AB002301	MAST4	0.601464	1.446025e-9	6.685553e-5	6.685553e-6
11	207554_x_at	200691_s_at	BC000478	HSPA9	-0.598343	1.846974e-9	8.539299e-5	7.762999e-6
12	207554_x_at	218302_at	NM_018468	PSENEN	-0.597787	1.928804e-9	8.917631e-5	7.431360e-6
13	336_at	207389_at	NM_000173	GP1BA	0.596094	2.199566e-9	1.016947e-4	7.822670e-6
14	336_at	207206_s_at	NM_000697	ALOX12	0.594679	2.453624e-9	1.134409e-4	8.102919e-6
15	336_at	213478_at	AB028949	KAZ	0.592035	3.004924e-9	1.389297e-4	9.261978e-6
16	336_at	201008_s_at	AA812232	TXNIP	-0.586357	4.615903e-9	2.134117e-4	1.333823e-5
17	207554_x_at	202944_at	NM_000262	NAGA	-0.584021	5.494544e-9	2.540348e-4	1.494322e-5
18	336_at	207550_at	NM_005373	MPL	0.583209	5.835528e-9	2.697998e-4	1.498888e-5
19	336_at	205128_x_at	NM_000962	PTGS1	0.580793	6.974136e-9	3.224422e-4	1.697064e-5
20	207554_x_at	202839_s_at	NM_004146	NDUFB7	-0.579870	7.463037e-9	3.450461e-4	1.725230e-5
21	336_at	200760_s_at	N92494	ARL6IP5	-0.578359	8.333879e-9	3.853086e-4	1.834803e-5
22	207554_x_at	214149_s_at	AI252582	ATP6V0E1	0.575903	9.959991e-9	4.604902e-4	2.093137e-5
23	207554_x_at	206936_x_at	NM_022335		0.574705	1.085971e-8	5.020877e-4	2.182990e-5
24	336_at	202026_at	NM_003002	SDHD	-0.572592	1.263689e-8	5.842538e-4	2.434391e-5
25	207554_x_at	217910_x_at	NM_013383	MLX	-0.572425	1.278817e-8	5.912482e-4	2.364993e-5
26	207554_x_at	227322_s_at	BE464077	BCCIP	-0.572172	1.302135e-8	6.020290e-4	2.315496e-5
27	207554_x_at	1559467_at	BI520422		0.568549	1.683885e-8	7.785276e-4	2.883436e-5
28	207554_x_at	201413_at	NM_000414	HSD17B4	-0.566841	1.898901e-8	8.779381e-4	3.135493e-5
29	207554_x_at	234675_x_at	AK027219		0.564295	2.268323e-8	1.048736e-3	3.616332e-5
30	336_at	205349_at	NM_002068	GNA15	0.564231	2.278411e-8	1.053401e-3	3.511336e-5
31	336_at	206655_s_at	NM_000407		0.563194	2.448444e-8	1.132014e-3	3.651657e-5
32	207554_x_at	233779_x_at	AK022046		0.562292	2.606282e-8	1.204988e-3	3.765588e-5
33	336_at	206109_at	NM_000148	FUT1	0.562141	2.633505e-8	1.217575e-3	3.689621e-5
34	207554_x_at	204513_s_at	NM_014800	ELMO1	-0.561728	2.709737e-8	1.252820e-3	3.684765e-5
35	207554_x_at	212432_at	AL542571	GRPEL1	-0.561687	2.717324e-8	1.256328e-3	3.589507e-5
36	207554_x_at	217016_x_at	AK026825	TMEM212	0.561253	2.799755e-8	1.294439e-3	3.595663e-5
37	207554_x_at	224493_x_at	BC006280	C18orf45	0.560589	2.930682e-8	1.354971e-3	3.662085e-5
38	336_at	32502_at	AL041124	GDPD5	0.559882	3.076211e-8	1.422256e-3	3.742778e-5
39	207554_x_at	233746_x_at	AW953521		-0.557908	3.520361e-8	1.627604e-3	4.173343e-5
40	207554_x_at	200947_s_at	NM_005271	GLUD1	-0.557217	3.689822e-8	1.705952e-3	4.264881e-5
41	207554_x_at	201748_s_at	NM_002967	SAFB	-0.554362	4.475619e-8	2.069258e-3	5.046970e-5
42	336_at	204805_s_at	NM_006026	H1FX	0.552622	5.029844e-8	2.325498e-3	5.536901e-5
43	207554_x_at	211048_s_at	BC006344	PDIA4	-0.552282	5.145528e-8	2.378984e-3	5.532520e-5
44	336_at	212439_at	BE614199	IP6K1	0.550078	5.959398e-8	2.755268e-3	6.261973e-5
45	207554_x_at	210616_s_at	AB020712	SEC31A	-0.549738	6.095161e-8	2.818037e-3	6.262303e-5
46	207554_x_at	214733_s_at	AL031427	YIPF1	-0.549702	6.109848e-8	2.824827e-3	6.140928e-5
47	207554_x_at	240182_at	AI276642		0.549398	6.234294e-8	2.882364e-3	6.132688e-5
48	207554_x_at	218680_x_at	NM_016400		-0.548490	6.619774e-8	3.060587e-3	6.376222e-5
49	207554_x_at	225266_at	AA526904	ZNF652	-0.548370	6.672461e-8	3.084946e-3	6.295808e-5
50	207554_x_at	219549_s_at	NM_006054	RTN3	-0.546704	7.445807e-8	3.442494e-3	6.884989e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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