[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5250	205016_at	NM_003236	TGFA		transforming growth factor, alpha

Fetching correlation data, please wait...
Getting list of correlations for id 5250.
Getting list of p-values for id 5250.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.128 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205016_at	1553851_at	NM_152323	SPIC	0.673890	2.137178e-12	4.940514e-8	4.940514e-8
2	205016_at	206584_at	NM_015364	LY96	0.633707	9.806640e-11	2.267001e-6	1.133501e-6
3	205016_at	226374_at	BG260087		0.611742	6.337678e-10	1.465081e-5	4.883603e-6
4	205016_at	205098_at	AI421071	CCR1	0.607149	9.196258e-10	2.125899e-5	5.314748e-6
5	205016_at	204084_s_at	AI911687	CLN5	0.593650	2.655489e-9	6.138693e-5	1.227739e-5
6	205016_at	229594_at	AI890299	SPTY2D1	0.587858	4.123985e-9	9.533416e-5	1.588903e-5
7	205016_at	208092_s_at	NM_030797	FAM49A	0.583562	5.684886e-9	1.314175e-4	1.877393e-5
8	205016_at	217916_s_at	NM_016623	FAM49B	0.579078	7.908076e-9	1.828110e-4	2.285138e-5
9	205016_at	202625_at	AI356412	LYN	0.577706	8.739748e-9	2.020368e-4	2.244853e-5
10	205016_at	219055_at	NM_018079	SRBD1	0.572650	1.258417e-8	2.909082e-4	2.909082e-5
11	205016_at	224392_s_at	AF303588	OPN3	0.570079	1.511278e-8	3.493621e-4	3.176019e-5
12	205016_at	204459_at	NM_001325	CSTF2	0.567923	1.759803e-8	4.068137e-4	3.390114e-5
13	205016_at	238496_at	AA741074		0.566653	1.924067e-8	4.447866e-4	3.421436e-5
14	205016_at	202686_s_at	NM_021913	AXL	0.558635	3.350077e-8	7.744374e-4	5.531696e-5
15	205016_at	219074_at	NM_018241	TMEM184C	0.555908	4.032174e-8	9.321177e-4	6.214118e-5
16	205016_at	213506_at	BE965369	F2RL1	0.554732	4.365501e-8	1.009173e-3	6.307331e-5
17	205016_at	209575_at	BC001903	IL10RB	0.543641	9.095166e-8	2.102529e-3	1.236782e-4
18	205016_at	207224_s_at	NM_016543	SIGLEC7	0.542883	9.553412e-8	2.208462e-3	1.226924e-4
19	205016_at	202010_s_at	NM_021188	ZNF410	0.541271	1.060331e-7	2.451168e-3	1.290088e-4
20	205016_at	204423_at	NM_013255	MKLN1	0.540400	1.121474e-7	2.592511e-3	1.296255e-4
21	205016_at	204137_at	NM_003272	GPR137B	0.540153	1.139450e-7	2.634067e-3	1.254317e-4
22	205016_at	205527_s_at	NM_015487	GEMIN4	0.535960	1.489013e-7	3.442151e-3	1.564614e-4
23	205016_at	206680_at	NM_005894	CD5L	0.535944	1.490549e-7	3.445702e-3	1.498131e-4
24	205016_at	225633_at	BF057717	DPY19L3	0.534401	1.643370e-7	3.798979e-3	1.582908e-4
25	205016_at	219253_at	NM_024121	TMEM185B	0.533315	1.759630e-7	4.067737e-3	1.627095e-4
26	205016_at	230550_at	AA045175	MS4A6A	0.533256	1.766154e-7	4.082817e-3	1.570314e-4
27	205016_at	201128_s_at	NM_001096	ACLY	0.530594	2.086182e-7	4.822627e-3	1.786158e-4
28	205016_at	210053_at	AW138827	TAF5	0.530054	2.157583e-7	4.987686e-3	1.781316e-4
29	205016_at	214440_at	NM_000662	NAT1	0.529347	2.254449e-7	5.211610e-3	1.797107e-4
30	205016_at	204214_s_at	NM_006834	RAB32	0.527914	2.463645e-7	5.695208e-3	1.898403e-4
31	205016_at	209683_at	AA243659	FAM49A	0.525171	2.916176e-7	6.741323e-3	2.174620e-4
32	205016_at	209206_at	AV701283	SEC22B	0.524452	3.047405e-7	7.044687e-3	2.201465e-4
33	205016_at	219334_s_at	NM_022837	OBFC2A	0.522310	3.471741e-7	8.025624e-3	2.432007e-4
34	205016_at	221044_s_at	NM_021616		0.521775	3.586209e-7	8.290240e-3	2.438306e-4
35	205016_at	209628_at	AK023289	NXT2	0.521770	3.587201e-7	8.292532e-3	2.369295e-4
36	205016_at	223452_s_at	AL117600	ATL3	0.521243	3.703542e-7	8.561479e-3	2.378189e-4
37	205016_at	230422_at	AW026543	FPR3	0.518690	4.318946e-7	9.984106e-3	2.698407e-4
38	205016_at	222514_at	AK023373	RRAGC	0.517816	4.550966e-7	1.052047e-2	2.768545e-4
39	205016_at	231995_at	AF131768	C9orf82	0.517575	4.617039e-7	1.067321e-2	2.736720e-4
40	205016_at	209505_at	AI951185	NR2F1	0.515255	5.300825e-7	1.225392e-2	3.063479e-4
41	205016_at	204370_at	NM_006831	CLP1	0.514881	5.419493e-7	1.252824e-2	3.055669e-4
42	205016_at	220112_at	NM_024669	ANKRD55	0.514291	5.612309e-7	1.297397e-2	3.089041e-4
43	205016_at	206214_at	NM_005084	PLA2G7	0.514095	5.677543e-7	1.312478e-2	3.052274e-4
44	205016_at	204554_at	AL109928	PPP1R3D	0.514087	5.680382e-7	1.313134e-2	2.984395e-4
45	205016_at	226298_at	BE394201	RUNDC1	0.513284	5.955996e-7	1.376848e-2	3.059661e-4
46	205016_at	223270_at	AF161543	CTDSPL2	0.511229	6.720357e-7	1.553545e-2	3.377271e-4
47	205016_at	206011_at	AI719655	CASP1	0.510861	6.866705e-7	1.587376e-2	3.377396e-4
48	205016_at	215049_x_at	Z22969	CD163	0.509793	7.308231e-7	1.689444e-2	3.519675e-4
49	205016_at	213379_at	AF091086	COQ2	0.508859	7.716437e-7	1.783809e-2	3.640426e-4
50	205016_at	225040_s_at	AV699857	RPE	0.508322	7.960839e-7	1.840307e-2	3.680614e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation