[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
11681	218442_at	NM_004623	TTC4		tetratricopeptide repeat domain 4
22628	46167_at	W22690	TTC4		tetratricopeptide repeat domain 4

Fetching correlation data, please wait...
Getting list of correlations for id 11681.
Getting list of p-values for id 11681.
1 of 2 done.
Getting list of correlations for id 22628.
Getting list of p-values for id 22628.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.214 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	46167_at	226466_s_at	AL544688	FAM58A	0.742907	5.951220e-16	2.751487e-11	2.751487e-11
2	46167_at	215903_s_at	BE786598	MAST2	0.730757	3.014134e-15	1.393555e-10	6.967774e-11
3	46167_at	227718_at	BF337790	PURB	0.727979	4.314117e-15	1.994589e-10	6.648629e-11
4	46167_at	224634_at	AI911518	GPATCH4	0.720282	1.139280e-14	5.267347e-10	1.316837e-10
5	46167_at	213203_at	AI633709	SNAPC5	0.719332	1.281572e-14	5.925218e-10	1.185044e-10
6	46167_at	218531_at	NM_025124	TMEM134	0.714230	2.390909e-14	1.105413e-9	1.842354e-10
7	46167_at	205672_at	NM_000380	XPA	0.708161	4.933294e-14	2.280859e-9	3.258370e-10
8	46167_at	36907_at	M88468	MVK	-0.699232	1.385837e-13	6.407277e-9	8.009096e-10
9	46167_at	45828_at	AI768100	ATP5SL	0.698602	1.488349e-13	6.881234e-9	7.645816e-10
10	46167_at	225657_at	BE563042	LOC152217	0.690359	3.727991e-13	1.723599e-8	1.723599e-9
11	46167_at	200941_at	AK026575	HSBP1	0.687071	5.331315e-13	2.464880e-8	2.240800e-9
12	46167_at	218138_at	NM_018848	MKKS	0.684178	7.276299e-13	3.364124e-8	2.803437e-9
13	46167_at	221514_at	BC001149	UTP14A	0.683318	7.975170e-13	3.687240e-8	2.836339e-9
14	218442_at	203299_s_at	AF251295	AP1S2	0.682400	8.792446e-13	4.065099e-8	2.903642e-9
15	46167_at	222010_at	BF224073		0.682086	9.090565e-13	4.202932e-8	2.801955e-9
16	46167_at	227640_s_at	AI492167		0.679934	1.140792e-12	5.274340e-8	3.296462e-9
17	46167_at	221515_s_at	BC001214	LCMT1	0.679167	1.236497e-12	5.716822e-8	3.362836e-9
18	46167_at	203384_s_at	NM_002077	GOLGA1	0.678637	1.306945e-12	6.042530e-8	3.356961e-9
19	46167_at	214177_s_at	AI935162	PBXIP1	0.678326	1.350139e-12	6.242232e-8	3.285385e-9
20	46167_at	218403_at	NM_016399	TRIAP1	0.677246	1.510994e-12	6.985930e-8	3.492965e-9
21	46167_at	43934_at	AA479495	GPR137	-0.676868	1.571556e-12	7.265932e-8	3.459968e-9
22	46167_at	204264_at	NM_000098	CPT2	0.675092	1.888556e-12	8.731551e-8	3.968887e-9
23	46167_at	211724_x_at	BC005883	MIOS	0.672721	2.409006e-12	1.113780e-7	4.842520e-9
24	46167_at	226994_at	AW057513	DNAJA2	0.671075	2.848803e-12	1.317116e-7	5.487983e-9
25	46167_at	41856_at	AL049370	UNC5B	-0.670718	2.953789e-12	1.365655e-7	5.462620e-9
26	46167_at	218470_at	NM_015936	YARS2	0.670698	2.959724e-12	1.368399e-7	5.263072e-9
27	218442_at	46167_at	W22690	TTC4	0.668199	3.808355e-12	1.760755e-7	6.521313e-9
28	46167_at	218442_at	NM_004623	TTC4	0.668199	3.808355e-12	1.760755e-7	6.288409e-9
29	46167_at	214170_x_at	AA669797	FH	0.667960	3.900926e-12	1.803554e-7	6.219152e-9
30	46167_at	225607_at	AI948491	CCDC43	0.666933	4.323252e-12	1.998812e-7	6.662708e-9
31	218442_at	1556121_at	AK021751	NAP1L1	0.663721	5.948180e-12	2.750082e-7	8.871231e-9
32	46167_at	217572_at	AA654586		-0.661521	7.384265e-12	3.414041e-7	1.066888e-8
33	46167_at	211615_s_at	M92439	LRPPRC	0.657884	1.051559e-11	4.861779e-7	1.473266e-8
34	46167_at	209513_s_at	BC004331	HSDL2	0.657335	1.108775e-11	5.126309e-7	1.507738e-8
35	46167_at	202713_s_at	AA129755	KIAA0391	0.656627	1.186984e-11	5.487900e-7	1.567971e-8
36	46167_at	229595_at	AI493303	CHCHD4	0.655970	1.264199e-11	5.844899e-7	1.623583e-8
37	46167_at	218993_at	NM_018146	RNMTL1	0.655347	1.341875e-11	6.204027e-7	1.676764e-8
38	46167_at	211566_x_at	U19178	BRE	0.653237	1.640645e-11	7.585360e-7	1.996147e-8
39	46167_at	203266_s_at	NM_003010	MAP2K4	0.650914	2.043256e-11	9.446791e-7	2.422254e-8
40	46167_at	224217_s_at	AF094700	FAF1	0.650324	2.159920e-11	9.986175e-7	2.496544e-8
41	46167_at	215411_s_at	AL008730	TRAF3IP2	0.650190	2.187096e-11	1.011182e-6	2.466297e-8
42	46167_at	212645_x_at	AL566299	BRE	0.649320	2.372797e-11	1.097039e-6	2.611997e-8
43	46167_at	209609_s_at	BC004517	MRPL9	0.648488	2.564594e-11	1.185715e-6	2.757476e-8
44	46167_at	57540_at	AI823980	RBKS	0.648331	2.602457e-11	1.203220e-6	2.734591e-8
45	46167_at	203095_at	NM_002453	MTIF2	0.648130	2.651437e-11	1.225865e-6	2.724145e-8
46	46167_at	32042_at	S72904	ENOX2	0.647169	2.899189e-11	1.340411e-6	2.913937e-8
47	46167_at	218287_s_at	NM_012199	EIF2C1	0.646823	2.993705e-11	1.384110e-6	2.944914e-8
48	46167_at	205550_s_at	NM_004899	BRE	0.646255	3.155397e-11	1.458866e-6	3.039305e-8
49	46167_at	219286_s_at	NM_022768	RBM15	0.645599	3.352579e-11	1.550031e-6	3.163329e-8
50	46167_at	201344_at	BF196642	UBE2D2	0.644409	3.740589e-11	1.729424e-6	3.458848e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation