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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
8227	211764_s_at	BC005980	UBE2D1		ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
10070	214590_s_at	AL545760	UBE2D1		ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)

Fetching correlation data, please wait...
Getting list of correlations for id 8227.
Getting list of p-values for id 8227.
1 of 2 done.
Getting list of correlations for id 10070.
Getting list of p-values for id 10070.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.208 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	214590_s_at	234982_at	BF577193	UBR3	0.871553	4.166325e-27	1.926259e-22	1.926259e-22
2	211764_s_at	200733_s_at	U48296	PTP4A1	0.864429	3.284278e-26	1.518453e-21	7.592266e-22
3	211764_s_at	214590_s_at	AL545760	UBE2D1	0.858056	1.890263e-25	8.739442e-21	2.913147e-21
4	214590_s_at	211764_s_at	BC005980	UBE2D1	0.858056	1.890263e-25	8.739442e-21	2.184861e-21
5	211764_s_at	202930_s_at	NM_003850	SUCLA2	0.857232	2.355628e-25	1.089101e-20	2.178202e-21
6	214590_s_at	201816_s_at	NM_001483	GBAS	0.856114	3.168882e-25	1.465101e-20	2.441835e-21
7	211764_s_at	203566_s_at	NM_000645	AGL	0.854620	4.690006e-25	2.168378e-20	3.097682e-21
8	214590_s_at	209142_s_at	BC002775	UBE2G1	0.853758	5.868889e-25	2.713422e-20	3.391777e-21
9	214590_s_at	200731_s_at	AW165960	PTP4A1	0.850727	1.277139e-24	5.904726e-20	6.560807e-21
10	214590_s_at	202930_s_at	NM_003850	SUCLA2	0.841925	1.111414e-23	5.138512e-19	5.138512e-20
11	214590_s_at	1552791_a_at	NM_006073	TRDN	0.839566	1.940762e-23	8.972920e-19	8.157200e-20
12	214590_s_at	223046_at	AL117352	EGLN1	0.838162	2.692945e-23	1.245056e-18	1.037547e-19
13	211764_s_at	221482_s_at	BC003418	ARPP19	0.833813	7.284756e-23	3.368034e-18	2.590795e-19
14	211764_s_at	223046_at	AL117352	EGLN1	0.830410	1.555957e-22	7.193811e-18	5.138436e-19
15	214590_s_at	227682_at	BE645154		0.824716	5.338774e-22	2.468329e-17	1.645552e-18
16	211764_s_at	205773_at	NM_014912	CPEB3	0.823590	6.777100e-22	3.133324e-17	1.958328e-18
17	214590_s_at	202166_s_at	NM_006241	PPP1R2	0.818926	1.788470e-21	8.268811e-17	4.864006e-18
18	214590_s_at	214449_s_at	NM_012249	RHOQ	0.818731	1.861542e-21	8.606652e-17	4.781474e-18
19	211764_s_at	201816_s_at	NM_001483	GBAS	0.817577	2.355734e-21	1.089150e-16	5.732370e-18
20	214590_s_at	212325_at	AK027231	LIMCH1	0.816554	2.898384e-21	1.340039e-16	6.700195e-18
21	214590_s_at	230029_x_at	AI708334	UBR3	0.812004	7.179711e-21	3.319468e-16	1.580699e-17
22	214590_s_at	221482_s_at	BC003418	ARPP19	0.810983	8.770825e-21	4.055103e-16	1.843229e-17
23	211764_s_at	230029_x_at	AI708334	UBR3	0.809351	1.204984e-20	5.571122e-16	2.422227e-17
24	211764_s_at	226782_at	BF001919	SLC25A30	0.808334	1.466219e-20	6.778918e-16	2.824549e-17
25	211764_s_at	228697_at	AW731710	HINT3	0.808254	1.488804e-20	6.883335e-16	2.753334e-17
26	211764_s_at	218701_at	NM_016027	LACTB2	0.806759	1.982428e-20	9.165556e-16	3.525214e-17
27	214590_s_at	206833_s_at	NM_001108	ACYP2	0.806249	2.184464e-20	1.009965e-15	3.740612e-17
28	211764_s_at	202704_at	AA675892	TOB1	0.806117	2.240241e-20	1.035753e-15	3.699118e-17
29	211764_s_at	222572_at	BG542521	PDP1	0.805990	2.295043e-20	1.061090e-15	3.658932e-17
30	214590_s_at	203566_s_at	NM_000645	AGL	0.805564	2.487709e-20	1.150167e-15	3.833891e-17
31	211764_s_at	225878_at	AL135264	KIF1B	0.805082	2.725081e-20	1.259914e-15	4.064239e-17
32	211764_s_at	234982_at	BF577193	UBR3	0.803967	3.361468e-20	1.554141e-15	4.856691e-17
33	214590_s_at	225878_at	AL135264	KIF1B	0.803185	3.891286e-20	1.799097e-15	5.451810e-17
34	211764_s_at	222924_at	BF526855	SLMAP	0.801489	5.333617e-20	2.465944e-15	7.252777e-17
35	211764_s_at	203335_at	NM_006214	PHYH	0.798978	8.459424e-20	3.911130e-15	1.117466e-16
36	214590_s_at	1556325_at	AL832009	FILIP1	0.798451	9.311664e-20	4.305155e-15	1.195876e-16
37	214590_s_at	209700_x_at	AB042555	PDE4DIP	0.797669	1.073090e-19	4.961325e-15	1.340899e-16
38	214590_s_at	209780_at	AL136883	PHTF2	0.797521	1.102141e-19	5.095638e-15	1.340957e-16
39	214590_s_at	205773_at	NM_014912	CPEB3	0.797411	1.124287e-19	5.198029e-15	1.332828e-16
40	214590_s_at	233496_s_at	AV726166	CFL2	0.796432	1.341427e-19	6.201955e-15	1.550489e-16
41	211764_s_at	225268_at	AU144710	KPNA4	0.796054	1.435527e-19	6.637014e-15	1.618784e-16
42	214590_s_at	218432_at	NM_012175	FBXO3	0.794276	1.971895e-19	9.116858e-15	2.170680e-16
43	214590_s_at	222919_at	AA192306	TRDN	0.793751	2.164511e-19	1.000740e-14	2.327302e-16
44	211764_s_at	205231_s_at	NM_005670	EPM2A	0.793443	2.285803e-19	1.056818e-14	2.401860e-16
45	214590_s_at	225665_at	AI129320	ZAK	0.793352	2.322924e-19	1.073980e-14	2.386623e-16
46	214590_s_at	228584_at	AI089025	SGCB	0.793047	2.451505e-19	1.133429e-14	2.463976e-16
47	214590_s_at	201975_at	NM_002956	CLIP1	0.792093	2.899679e-19	1.340638e-14	2.852421e-16
48	211764_s_at	208905_at	BC005299	CYCS	0.791295	3.334376e-19	1.541616e-14	3.211699e-16
49	211764_s_at	203067_at	NM_003477	PDHX	0.789544	4.522104e-19	2.090750e-14	4.266836e-16
50	214590_s_at	210299_s_at	AF063002	FHL1	0.789536	4.527762e-19	2.093366e-14	4.186731e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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