[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6303	207996_s_at	NM_004338	C18orf1		chromosome 18 open reading frame 1
7283	209574_s_at	AI349506	C18orf1		chromosome 18 open reading frame 1

Fetching correlation data, please wait...
Getting list of correlations for id 6303.
Getting list of p-values for id 6303.
1 of 2 done.
Getting list of correlations for id 7283.
Getting list of p-values for id 7283.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.213 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	207996_s_at	238919_at	R49295		0.772939	7.086949e-18	3.276580e-13	3.276580e-13
2	209574_s_at	226550_at	AI672159		0.765291	2.330850e-17	1.077645e-12	5.388227e-13
3	209574_s_at	204730_at	NM_014747	RIMS3	0.748802	2.620747e-16	1.211676e-11	4.038920e-12
4	207996_s_at	218247_s_at	NM_016626	MEX3C	0.747659	3.077682e-16	1.422936e-11	3.557339e-12
5	207996_s_at	226265_at	AW294894	QSER1	0.747578	3.113089e-16	1.439305e-11	2.878611e-12
6	207996_s_at	227798_at	AU146891	SMAD1	0.747305	3.234610e-16	1.495490e-11	2.492483e-12
7	207996_s_at	203787_at	NM_012446	SSBP2	0.744404	4.842464e-16	2.238865e-11	3.198379e-12
8	207996_s_at	227766_at	AI829314	LIG4	0.732178	2.504609e-15	1.157981e-10	1.447476e-11
9	209574_s_at	205297_s_at	NM_000626	CD79B	0.726705	5.078260e-15	2.347883e-10	2.608759e-11
10	209574_s_at	236796_at	AI052447	BACH2	0.716658	1.780061e-14	8.229934e-10	8.229934e-11
11	209574_s_at	203556_at	NM_014943	ZHX2	0.713196	2.708426e-14	1.252214e-9	1.138376e-10
12	209574_s_at	219471_at	NM_025113	C13orf18	0.712927	2.797544e-14	1.293416e-9	1.077847e-10
13	209574_s_at	236307_at	AA085906		0.711989	3.130825e-14	1.447505e-9	1.113466e-10
14	209574_s_at	221234_s_at	NM_021813	BACH2	0.711363	3.374261e-14	1.560056e-9	1.114325e-10
15	207996_s_at	221763_at	AI694023	JMJD1C	0.711250	3.419970e-14	1.581189e-9	1.054126e-10
16	209574_s_at	44790_s_at	AI129310	C13orf18	0.709427	4.247940e-14	1.963993e-9	1.227495e-10
17	207996_s_at	226178_at	BF446961	SOCS4	0.708164	4.931583e-14	2.280068e-9	1.341217e-10
18	207996_s_at	224759_s_at	AK001731	C12orf23	0.704278	7.767145e-14	3.591062e-9	1.995034e-10
19	209574_s_at	227198_at	AW085505	AFF3	0.701823	1.030907e-13	4.766296e-9	2.508577e-10
20	209574_s_at	220668_s_at	NM_006892	DNMT3B	0.700394	1.214073e-13	5.613147e-9	2.806573e-10
21	209574_s_at	230983_at	BE646461	FAM129C	0.700077	1.258793e-13	5.819903e-9	2.771383e-10
22	209574_s_at	236198_at	AW292872		0.693358	2.678780e-13	1.238507e-8	5.629578e-10
23	207996_s_at	202946_s_at	NM_014962	BTBD3	0.689883	3.927327e-13	1.815760e-8	7.894609e-10
24	209574_s_at	1556451_at	AL833645		0.689585	4.057179e-13	1.875796e-8	7.815817e-10
25	207996_s_at	202798_at	NM_006323	SEC24B	0.687824	4.914117e-13	2.271993e-8	9.087971e-10
26	207996_s_at	203791_at	NM_005509	DMXL1	0.687325	5.186937e-13	2.398129e-8	9.223572e-10
27	209574_s_at	232286_at	AA572675		0.686987	5.380154e-13	2.487460e-8	9.212816e-10
28	209574_s_at	221349_at	NM_007128	VPREB1	0.686666	5.569768e-13	2.575127e-8	9.196881e-10
29	207996_s_at	228377_at	AB037805	KLHL14	0.686260	5.819466e-13	2.690572e-8	9.277835e-10
30	209574_s_at	220068_at	NM_013378	VPREB3	0.685086	6.601836e-13	3.052293e-8	1.017431e-9
31	207996_s_at	226464_at	BE348597	C3orf58	0.683852	7.533966e-13	3.483254e-8	1.123630e-9
32	207996_s_at	212615_at	AI742305	CHD9	0.679487	1.195715e-12	5.528269e-8	1.727584e-9
33	207996_s_at	208775_at	D89729	XPO1	0.679052	1.251395e-12	5.785698e-8	1.753242e-9
34	209574_s_at	224666_at	AF161451	NSMCE1	0.677074	1.538249e-12	7.111941e-8	2.091747e-9
35	207996_s_at	218605_at	NM_022366	TFB2M	0.675885	1.740024e-12	8.044828e-8	2.298522e-9
36	209574_s_at	216095_x_at	AF057354	MTMR1	0.672973	2.347601e-12	1.085390e-7	3.014971e-9
37	209574_s_at	224912_at	AB032966	TTC7A	0.672896	2.366344e-12	1.094056e-7	2.956907e-9
38	207996_s_at	211987_at	NM_001068	TOP2B	0.672078	2.572479e-12	1.189360e-7	3.129895e-9
39	207996_s_at	202271_at	AB007952	FBXO28	0.671735	2.663770e-12	1.231567e-7	3.157865e-9
40	209574_s_at	213511_s_at	AI167164	MTMR1	0.669741	3.260757e-12	1.507578e-7	3.768946e-9
41	207996_s_at	233093_s_at	AK023788	BIRC6	0.669241	3.429512e-12	1.585600e-7	3.867318e-9
42	209574_s_at	1559618_at	BQ188678	LOC100129447	0.669172	3.453375e-12	1.596633e-7	3.801508e-9
43	207996_s_at	218005_at	AA744771	ZNF22	0.668457	3.710916e-12	1.715705e-7	3.990011e-9
44	207996_s_at	228242_at	BF055201	N4BP2	0.667354	4.145402e-12	1.916585e-7	4.355876e-9
45	209574_s_at	228377_at	AB037805	KLHL14	0.666684	4.432344e-12	2.049250e-7	4.553889e-9
46	209574_s_at	209995_s_at	BC003574	TCL1A	0.666039	4.726806e-12	2.185391e-7	4.750851e-9
47	207996_s_at	212893_at	AL080063	ZZZ3	0.665341	5.066587e-12	2.342486e-7	4.984012e-9
48	209574_s_at	39318_at	X82240	TCL1A	0.662463	6.732687e-12	3.112790e-7	6.484980e-9
49	209574_s_at	219737_s_at	AI524125	PCDH9	0.662284	6.851991e-12	3.167949e-7	6.465203e-9
50	209574_s_at	218523_at	NM_022126	LHPP	0.660474	8.178960e-12	3.781460e-7	7.562921e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation