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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
540	1555789_s_at	AY099328	PHF23		PHD finger protein 23
14066	223081_at	BC002509	PHF23		PHD finger protein 23

Fetching correlation data, please wait...
Getting list of correlations for id 540.
Getting list of p-values for id 540.
1 of 2 done.
Getting list of correlations for id 14066.
Getting list of p-values for id 14066.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.221 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1555789_s_at	207629_s_at	NM_004723	ARHGEF2	0.782728	1.440479e-18	6.659912e-14	6.659912e-14
2	1555789_s_at	1552977_a_at	NM_006586	CNPY3	0.771894	8.361414e-18	3.865816e-13	1.932908e-13
3	1555789_s_at	224613_s_at	BF115518	DNAJC5	0.771652	8.686396e-18	4.016068e-13	1.338689e-13
4	1555789_s_at	201461_s_at	NM_004759	MAPKAPK2	0.764057	2.812244e-17	1.300213e-12	3.250532e-13
5	1555789_s_at	200646_s_at	NM_006184	NUCB1	0.743750	5.300092e-16	2.450445e-11	4.900889e-12
6	223081_at	201271_s_at	NM_016732	RALY	0.742357	6.417326e-16	2.966986e-11	4.944977e-12
7	223081_at	200990_at	NM_005762	TRIM28	0.739909	8.955070e-16	4.140287e-11	5.914696e-12
8	1555789_s_at	213490_s_at	AI762811	MAP2K2	0.739645	9.281429e-16	4.291176e-11	5.363970e-12
9	1555789_s_at	211159_s_at	AB000635	PPP2R5D	0.737658	1.212671e-15	5.606664e-11	6.229627e-12
10	1555789_s_at	223025_s_at	AF290613	AP1M1	0.735925	1.528316e-15	7.066015e-11	7.066015e-12
11	1555789_s_at	209880_s_at	U02297	SELPLG	0.735641	1.587001e-15	7.337340e-11	6.670309e-12
12	223081_at	204480_s_at	NM_024112	C9orf16	0.733979	1.977307e-15	9.141883e-11	7.618235e-12
13	1555789_s_at	218143_s_at	NM_005697	SCAMP2	0.732681	2.344860e-15	1.084123e-10	8.339405e-12
14	1555789_s_at	221851_at	AI073983	DCAF15	0.732262	2.477216e-15	1.145316e-10	8.180830e-12
15	1555789_s_at	1567107_s_at	AF362887	TPM4	0.730442	3.139552e-15	1.451540e-10	9.676936e-12
16	223081_at	201755_at	NM_006739	MCM5	0.727838	4.392646e-15	2.030896e-10	1.269310e-11
17	1555789_s_at	201401_s_at	M80776	ADRBK1	0.727066	4.849447e-15	2.242093e-10	1.318878e-11
18	223081_at	202848_s_at	BG423052	GRK6	0.726065	5.509031e-15	2.547045e-10	1.415025e-11
19	1555789_s_at	217983_s_at	NM_003730	RNASET2	0.725731	5.748596e-15	2.657806e-10	1.398845e-11
20	223081_at	222429_at	AF077353	DBNL	0.724738	6.519268e-15	3.014118e-10	1.507059e-11
21	1555789_s_at	224868_at	BE961925	ZDHHC5	0.721215	1.014523e-14	4.690545e-10	2.233593e-11
22	223081_at	222165_x_at	AK022885	C9orf16	0.720742	1.076070e-14	4.975104e-10	2.261411e-11
23	223081_at	41047_at	AI885170	C9orf16	0.720267	1.141524e-14	5.277723e-10	2.294662e-11
24	1555789_s_at	211136_s_at	BC004865	CLPTM1	0.720236	1.145896e-14	5.297935e-10	2.207473e-11
25	1555789_s_at	218813_s_at	NM_020145	SH3GLB2	0.719892	1.195816e-14	5.528736e-10	2.211495e-11
26	1555789_s_at	213986_s_at	AI805266	C19orf6	0.717125	1.681229e-14	7.772993e-10	2.989613e-11
27	223081_at	223003_at	AF061732	C19orf43	0.716576	1.797835e-14	8.312109e-10	3.078559e-11
28	223081_at	218075_at	NM_015665	AAAS	0.716136	1.897072e-14	8.770921e-10	3.132472e-11
29	223081_at	201746_at	NM_000546	TP53	0.715663	2.009457e-14	9.290524e-10	3.203629e-11
30	1555789_s_at	210120_s_at	BC004349	RANBP3	0.714609	2.283719e-14	1.055855e-9	3.519516e-11
31	1555789_s_at	211299_s_at	BC003683	FLOT2	0.713275	2.682934e-14	1.240428e-9	4.001380e-11
32	223081_at	210981_s_at	AF040751	GRK6	0.713230	2.697320e-14	1.247079e-9	3.897122e-11
33	223081_at	212861_at	BF690150	MFSD5	0.711842	3.186549e-14	1.473269e-9	4.464452e-11
34	223081_at	220023_at	NM_018690	APOB48R	0.711729	3.229663e-14	1.493202e-9	4.391772e-11
35	223081_at	220525_s_at	NM_012103	AUP1	0.711242	3.423293e-14	1.582726e-9	4.522073e-11
36	1555789_s_at	220525_s_at	NM_012103	AUP1	0.710256	3.849963e-14	1.779992e-9	4.944422e-11
37	223081_at	209350_s_at	AL157493		0.709628	4.147758e-14	1.917675e-9	5.182904e-11
38	223081_at	218143_s_at	NM_005697	SCAMP2	0.708765	4.593895e-14	2.123941e-9	5.589319e-11
39	1555789_s_at	208686_s_at	D42040	BRD2	0.708346	4.827130e-14	2.231775e-9	5.722501e-11
40	223081_at	206687_s_at	NM_002831	PTPN6	0.707800	5.147647e-14	2.379963e-9	5.949908e-11
41	223081_at	1555789_s_at	AY099328	PHF23	0.705982	6.369922e-14	2.945070e-9	7.183097e-11
42	1555789_s_at	223081_at	BC002509	PHF23	0.705982	6.369922e-14	2.945070e-9	7.012071e-11
43	1555789_s_at	1555730_a_at	D00682	CFL1	0.705907	6.426351e-14	2.971159e-9	6.909672e-11
44	1555789_s_at	200742_s_at	BG231932	TPP1	0.705178	6.995962e-14	3.234513e-9	7.351166e-11
45	1555789_s_at	211121_s_at	AF180527	DOK1	0.704729	7.370808e-14	3.407819e-9	7.572932e-11
46	1555789_s_at	209264_s_at	AF054841	TSPAN4	0.701916	1.019947e-13	4.715625e-9	1.025136e-10
47	1555789_s_at	225294_s_at	BG340967	TRAPPC1	0.701798	1.033879e-13	4.780038e-9	1.017029e-10
48	1555789_s_at	200072_s_at	AF061832	HNRNPM	0.700203	1.240834e-13	5.736874e-9	1.195182e-10
49	1555789_s_at	225375_at	AW975808	TMEM199	0.699787	1.301077e-13	6.015400e-9	1.227633e-10
50	1555789_s_at	201552_at	NM_005561	LAMP1	0.699036	1.417024e-13	6.551470e-9	1.310294e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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