[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 6 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
7797	210629_x_at	AF000425	LST1		leukocyte specific transcript 1
8131	211581_x_at	AF000426	LST1		leukocyte specific transcript 1
8132	211582_x_at	AF000424	LST1		leukocyte specific transcript 1
9922	214181_x_at	AI735692	LST1		leukocyte specific transcript 1
10063	214574_x_at	NM_007161	LST1		leukocyte specific transcript 1
10507	215633_x_at	AV713720	LST1		leukocyte specific transcript 1

Fetching correlation data, please wait...
Getting list of correlations for id 7797.
Getting list of p-values for id 7797.
1 of 6 done.
Getting list of correlations for id 8131.
Getting list of p-values for id 8131.
2 of 6 done.
Getting list of correlations for id 8132.
Getting list of p-values for id 8132.
3 of 6 done.
Getting list of correlations for id 9922.
Getting list of p-values for id 9922.
4 of 6 done.
Getting list of correlations for id 10063.
Getting list of p-values for id 10063.
5 of 6 done.
Getting list of correlations for id 10507.
Getting list of p-values for id 10507.
6 of 6 done.
Calculating corrections for multiple testing (n=138702), please wait...
Done; whole program took 0.589 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	211581_x_at	211582_x_at	AF000424	LST1	0.991592	1.341803e-74	1.861108e-69	1.861108e-69
2	211582_x_at	211581_x_at	AF000426	LST1	0.991592	1.341803e-74	1.861108e-69	9.305538e-70
3	211582_x_at	214181_x_at	AI735692	LST1	0.984822	3.864503e-64	5.360143e-59	1.786714e-59
4	214181_x_at	211582_x_at	AF000424	LST1	0.984822	3.864503e-64	5.360143e-59	1.340036e-59
5	211581_x_at	210629_x_at	AF000425	LST1	0.983626	8.441991e-63	1.170921e-57	2.341842e-58
6	210629_x_at	211581_x_at	AF000426	LST1	0.983626	8.441991e-63	1.170921e-57	1.951535e-58
7	210629_x_at	211582_x_at	AF000424	LST1	0.982704	7.842338e-62	1.087748e-56	1.553926e-57
8	211582_x_at	210629_x_at	AF000425	LST1	0.982704	7.842338e-62	1.087748e-56	1.359685e-57
9	215633_x_at	211581_x_at	AF000426	LST1	0.982348	1.794397e-61	2.488864e-56	2.765405e-57
10	211581_x_at	215633_x_at	AV713720	LST1	0.982348	1.794397e-61	2.488864e-56	2.488864e-57
11	215633_x_at	210629_x_at	AF000425	LST1	0.980331	1.457963e-59	2.022224e-54	1.838386e-55
12	210629_x_at	215633_x_at	AV713720	LST1	0.980331	1.457963e-59	2.022224e-54	1.685187e-55
13	214181_x_at	214574_x_at	NM_007161	LST1	0.979651	5.793267e-59	8.035377e-54	6.181059e-55
14	214574_x_at	214181_x_at	AI735692	LST1	0.979651	5.793267e-59	8.035377e-54	5.739555e-55
15	214181_x_at	211581_x_at	AF000426	LST1	0.978419	6.290610e-58	8.725202e-53	5.816801e-54
16	211581_x_at	214181_x_at	AI735692	LST1	0.978419	6.290610e-58	8.725202e-53	5.453251e-54
17	215633_x_at	211582_x_at	AF000424	LST1	0.978107	1.126411e-57	1.562354e-52	9.190321e-54
18	211582_x_at	215633_x_at	AV713720	LST1	0.978107	1.126411e-57	1.562354e-52	8.679747e-54
19	214181_x_at	215633_x_at	AV713720	LST1	0.972327	1.492915e-53	2.070703e-48	1.089844e-49
20	215633_x_at	214181_x_at	AI735692	LST1	0.972327	1.492915e-53	2.070703e-48	1.035351e-49
21	214574_x_at	211582_x_at	AF000424	LST1	0.969416	8.514624e-52	1.180995e-46	5.623788e-48
22	211582_x_at	214574_x_at	NM_007161	LST1	0.969416	8.514624e-52	1.180995e-46	5.368161e-48
23	214181_x_at	210629_x_at	AF000425	LST1	0.969380	8.928174e-52	1.238356e-46	5.384155e-48
24	210629_x_at	214181_x_at	AI735692	LST1	0.969380	8.928174e-52	1.238356e-46	5.159815e-48
25	211581_x_at	214574_x_at	NM_007161	LST1	0.966179	4.938989e-50	6.850477e-45	2.740191e-46
26	214574_x_at	211581_x_at	AF000426	LST1	0.966179	4.938989e-50	6.850477e-45	2.634799e-46
27	214574_x_at	215633_x_at	AV713720	LST1	0.957797	3.661637e-46	5.078763e-41	1.881023e-42
28	215633_x_at	214574_x_at	NM_007161	LST1	0.957797	3.661637e-46	5.078763e-41	1.813844e-42
29	210629_x_at	214574_x_at	NM_007161	LST1	0.950773	1.753053e-43	2.431519e-38	8.384549e-40
30	214574_x_at	210629_x_at	AF000425	LST1	0.950773	1.753053e-43	2.431519e-38	8.105064e-40
31	210629_x_at	212191_x_at	AW574664	RPL13	0.801485	5.338169e-20	7.404147e-15	2.388435e-16
32	215633_x_at	208932_at	BC001416	PPP4C	0.791913	2.992421e-19	4.150547e-14	1.297046e-15
33	215633_x_at	201400_at	NM_002795	PSMB3	0.785420	9.162186e-19	1.270814e-13	3.850950e-15
34	211581_x_at	212191_x_at	AW574664	RPL13	0.782991	1.378663e-18	1.912234e-13	5.624217e-15
35	215633_x_at	212191_x_at	AW574664	RPL13	0.781119	1.882250e-18	2.610718e-13	7.459194e-15
36	210629_x_at	201400_at	NM_002795	PSMB3	0.778836	2.740419e-18	3.801015e-13	1.055838e-14
37	211581_x_at	201400_at	NM_002795	PSMB3	0.775405	4.779817e-18	6.629701e-13	1.791811e-14
38	211582_x_at	224615_x_at	AL110115	HM13	0.774444	5.576243e-18	7.734361e-13	2.035358e-14
39	210629_x_at	212734_x_at	AI186735	RPL13	0.771732	8.577409e-18	1.189704e-12	3.050523e-14
40	211582_x_at	212191_x_at	AW574664	RPL13	0.771670	8.661590e-18	1.201380e-12	3.003450e-14
41	215633_x_at	219296_at	NM_019028	ZDHHC13	0.770916	9.753604e-18	1.352844e-12	3.299621e-14
42	211582_x_at	218206_x_at	NM_016558	SCAND1	0.770110	1.106565e-17	1.534828e-12	3.654352e-14
43	211582_x_at	218749_s_at	NM_024959	SLC24A6	0.769968	1.131474e-17	1.569378e-12	3.649715e-14
44	215633_x_at	219549_s_at	NM_006054	RTN3	0.769669	1.185525e-17	1.644347e-12	3.737152e-14
45	211581_x_at	212041_at	AL566172	ATP6V0D1	0.768226	1.483967e-17	2.058292e-12	4.573983e-14
46	211582_x_at	212041_at	AL566172	ATP6V0D1	0.767575	1.641116e-17	2.276260e-12	4.948392e-14
47	211581_x_at	233746_x_at	AW953521		0.766932	1.812326e-17	2.513733e-12	5.348367e-14
48	211582_x_at	224890_s_at	BE727643	C7orf59	0.766787	1.853159e-17	2.570368e-12	5.354934e-14
49	211582_x_at	201400_at	NM_002795	PSMB3	0.766358	1.979309e-17	2.745341e-12	5.602736e-14
50	211582_x_at	233746_x_at	AW953521		0.765275	2.336545e-17	3.240834e-12	6.481669e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation