[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4484	203825_at	NM_007371	BRD3		bromodomain containing 3
8836	212547_at	N34842	BRD3		bromodomain containing 3

Fetching correlation data, please wait...
Getting list of correlations for id 4484.
Getting list of p-values for id 4484.
1 of 2 done.
Getting list of correlations for id 8836.
Getting list of p-values for id 8836.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.257 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	212547_at	217877_s_at	NM_021639	GPBP1L1	0.785798	8.593093e-19	3.972931e-14	3.972931e-14
2	212547_at	208854_s_at	AA586774	STK24	0.784421	1.084439e-18	5.013794e-14	2.506897e-14
3	212547_at	203611_at	NM_005652	TERF2	0.762265	3.687394e-17	1.704830e-12	5.682766e-13
4	212547_at	217923_at	NM_012392	PEF1	0.745686	4.054477e-16	1.874547e-11	4.686367e-12
5	212547_at	63009_at	AI188402	SHQ1	0.745175	4.352092e-16	2.012146e-11	4.024293e-12
6	212547_at	201127_s_at	AI971281	ACLY	0.741348	7.365509e-16	3.405369e-11	5.675615e-12
7	203825_at	209489_at	N25915	CELF1	0.740759	7.979669e-16	3.689320e-11	5.270457e-12
8	212547_at	226729_at	BF789968	USP37	0.734651	1.809512e-15	8.366097e-11	1.045762e-11
9	212547_at	207939_x_at	NM_006711	RNPS1	0.730855	2.975871e-15	1.375864e-10	1.528738e-11
10	212547_at	224635_s_at	AI017106	BIRC6	0.729338	3.622119e-15	1.674651e-10	1.674651e-11
11	212547_at	224748_at	AK025925	DCAF7	0.727097	4.829781e-15	2.233001e-10	2.030001e-11
12	212547_at	218076_s_at	NM_018054	ARHGAP17	0.726162	5.441509e-15	2.515827e-10	2.096523e-11
13	212547_at	222452_s_at	AA741071	GPBP1L1	0.723813	7.327402e-15	3.387751e-10	2.605963e-11
14	212547_at	201413_at	NM_000414	HSD17B4	0.723785	7.352910e-15	3.399545e-10	2.428246e-11
15	212547_at	218754_at	NM_024654	NOL9	0.719009	1.333753e-14	6.166474e-10	4.110983e-11
16	212547_at	202189_x_at	NM_002819	PTBP1	0.717675	1.571539e-14	7.265853e-10	4.541158e-11
17	203825_at	210835_s_at	AF222711	CTBP2	0.712859	2.820607e-14	1.304080e-9	7.671056e-11
18	212547_at	212129_at	AI589507	NIPA2	0.712743	2.859980e-14	1.322283e-9	7.346019e-11
19	212547_at	217832_at	BE672181	SYNCRIP	0.711938	3.149872e-14	1.456312e-9	7.664799e-11
20	212547_at	209705_at	BG033764	MTF2	0.705884	6.443390e-14	2.979037e-9	1.489518e-10
21	212547_at	204513_s_at	NM_014800	ELMO1	0.704701	7.394919e-14	3.418967e-9	1.628080e-10
22	212547_at	203482_at	AL133215	FAM178A	0.704411	7.647714e-14	3.535844e-9	1.607202e-10
23	212547_at	212836_at	D26018	POLD3	0.703500	8.498521e-14	3.929206e-9	1.708350e-10
24	212547_at	212837_at	D63877	FAM175B	0.703168	8.830558e-14	4.082720e-9	1.701133e-10
25	212547_at	240393_at	AI494347		-0.700635	1.181178e-13	5.461059e-9	2.184423e-10
26	212547_at	205565_s_at	NM_000144	FXN	0.699718	1.311364e-13	6.062961e-9	2.331908e-10
27	212547_at	200854_at	AB028970	NCOR1	0.699389	1.361278e-13	6.293731e-9	2.331012e-10
28	212547_at	200057_s_at	NM_007363	NONO	0.698693	1.473092e-13	6.810694e-9	2.432391e-10
29	212547_at	211594_s_at	AB049636	MRPL9	0.697094	1.764790e-13	8.159329e-9	2.813562e-10
30	212547_at	213730_x_at	BE962186	TCF3	0.695983	1.999116e-13	9.242711e-9	3.080904e-10
31	212547_at	200594_x_at	NM_004501	HNRNPU	0.695750	2.051975e-13	9.487103e-9	3.060356e-10
32	212547_at	212180_at	AK000311	CRKL	0.694174	2.446702e-13	1.131208e-8	3.535025e-10
33	212547_at	212015_x_at	BF690062	PTBP1	0.693865	2.532247e-13	1.170759e-8	3.547754e-10
34	212547_at	212396_s_at	AI143233	KIAA0090	0.693138	2.744944e-13	1.269098e-8	3.732640e-10
35	212547_at	200713_s_at	NM_012325	MAPRE1	0.692926	2.810012e-13	1.299181e-8	3.711945e-10
36	212547_at	225440_at	BE737251	AGPAT3	0.690746	3.573191e-13	1.652029e-8	4.588970e-10
37	212547_at	209497_s_at	BC003503	RBM4B	0.690432	3.698058e-13	1.709760e-8	4.620973e-10
38	212547_at	212639_x_at	AL581768	TUBA1B	0.690225	3.783111e-13	1.749083e-8	4.602851e-10
39	212547_at	235434_at	AI984541		0.689936	3.904589e-13	1.805248e-8	4.628840e-10
40	212547_at	243840_at	BF691634		0.689646	4.030134e-13	1.863292e-8	4.658230e-10
41	212547_at	225444_at	AV733292	UBN2	0.689476	4.105891e-13	1.898318e-8	4.630043e-10
42	212547_at	225135_at	AI433017	SIN3A	0.686380	5.744562e-13	2.655941e-8	6.323668e-10
43	203825_at	201220_x_at	NM_001329	CTBP2	0.685414	6.373381e-13	2.946669e-8	6.852719e-10
44	212547_at	223145_s_at	BC000764	AKIRIN2	0.685158	6.550962e-13	3.028772e-8	6.883572e-10
45	212547_at	210776_x_at	M31222	TCF3	0.683693	7.662608e-13	3.542730e-8	7.872734e-10
46	212547_at	201628_s_at	NM_006570	RRAGA	0.683281	8.006499e-13	3.701725e-8	8.047228e-10
47	203825_at	222282_at	AV761453		0.682562	8.642932e-13	3.995973e-8	8.502071e-10
48	212547_at	213811_x_at	AW062341	TCF3	0.682180	8.999895e-13	4.161012e-8	8.668774e-10
49	212547_at	208704_x_at	BC000373	APLP2	0.681736	9.434083e-13	4.361754e-8	8.901538e-10
50	212547_at	217347_at	Z82202		-0.681689	9.480767e-13	4.383338e-8	8.766676e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation