[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
12832	220591_s_at	NM_025184	EFHC2		EF-hand domain (C-terminal) containing 2

Fetching correlation data, please wait...
Getting list of correlations for id 12832.
Getting list of p-values for id 12832.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.324 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	220591_s_at	222892_s_at	AI087937	TMEM40	0.626684	1.809467e-10	4.182944e-6	4.182944e-6
2	220591_s_at	209839_at	AL136712	DNM3	0.620203	3.142018e-10	7.263403e-6	3.631701e-6
3	220591_s_at	228195_at	BE645119	C2orf88	0.612545	5.934695e-10	1.371924e-5	4.573078e-6
4	220591_s_at	220496_at	NM_016509	CLEC1B	0.609361	7.692723e-10	1.778327e-5	4.445817e-6
5	220591_s_at	226923_at	AW205790	SCFD2	0.608608	8.175704e-10	1.889977e-5	3.779955e-6
6	220591_s_at	241133_at	AI016855	TRBV27	0.604960	1.095869e-9	2.533320e-5	4.222200e-6
7	220591_s_at	204628_s_at	NM_000212	ITGB3	0.600447	1.566561e-9	3.621419e-5	5.173456e-6
8	220591_s_at	240456_at	AA459699	ANKRD55	0.595880	2.236390e-9	5.169864e-5	6.462329e-6
9	220591_s_at	207018_s_at	NM_004163	RAB27B	0.587924	4.103632e-9	9.486366e-5	1.054041e-5
10	220591_s_at	243115_at	AI633618		0.583459	5.728413e-9	1.324237e-4	1.324237e-5
11	220591_s_at	206382_s_at	NM_001709	BDNF	0.581818	6.467580e-9	1.495111e-4	1.359191e-5
12	220591_s_at	217520_x_at	BG396614	LOC646278	0.580048	7.366282e-9	1.702864e-4	1.419053e-5
13	220591_s_at	212074_at	BE972774		-0.577064	9.157253e-9	2.116882e-4	1.628371e-5
14	220591_s_at	214146_s_at	R64130	PPBP	0.575852	9.997028e-9	2.311013e-4	1.650724e-5
15	220591_s_at	204822_at	NM_003318	TTK	0.573425	1.190501e-8	2.752082e-4	1.834721e-5
16	220591_s_at	235425_at	AW965339	SGOL2	0.571547	1.361516e-8	3.147417e-4	1.967135e-5
17	220591_s_at	232097_at	AA657818	TOX4	0.571045	1.411074e-8	3.261980e-4	1.918812e-5
18	220591_s_at	211794_at	AF198052	FYB	0.566470	1.948900e-8	4.505272e-4	2.502929e-5
19	220591_s_at	243578_at	AW293956		0.561185	2.812907e-8	6.502597e-4	3.422420e-5
20	220591_s_at	221664_s_at	AF154005	F11R	0.561117	2.826171e-8	6.533259e-4	3.266629e-5
21	220591_s_at	221745_at	BE538424	DCAF7	0.560447	2.959241e-8	6.840877e-4	3.257561e-5
22	220591_s_at	242094_at	AI949266		0.559167	3.230517e-8	7.467987e-4	3.394540e-5
23	220591_s_at	209049_s_at	BC001004	ZMYND8	0.557798	3.546856e-8	8.199267e-4	3.564899e-5
24	220591_s_at	229274_at	AI693143	GNAS	0.555386	4.177099e-8	9.656199e-4	4.023416e-5
25	220591_s_at	207926_at	NM_004488	GP5	0.554753	4.359287e-8	1.007736e-3	4.030945e-5
26	220591_s_at	236533_at	AW236958	ASAP1	0.553698	4.680017e-8	1.081880e-3	4.161075e-5
27	220591_s_at	221753_at	AI651213	SSH1	0.552444	5.090136e-8	1.176687e-3	4.358099e-5
28	220591_s_at	242975_s_at	AV753357		0.551994	5.245694e-8	1.212647e-3	4.330883e-5
29	220591_s_at	223476_s_at	AW007238	C12orf65	0.548606	6.569216e-8	1.518606e-3	5.236571e-5
30	220591_s_at	202412_s_at	AW499935	USP1	0.548352	6.680515e-8	1.544335e-3	5.147782e-5
31	220591_s_at	212926_at	AW183677	SMC5	0.548214	6.741723e-8	1.558484e-3	5.027368e-5
32	220591_s_at	209890_at	AF065389	TSPAN5	0.544779	8.445312e-8	1.952303e-3	6.100946e-5
33	220591_s_at	221895_at	AW469184	MOSPD2	0.544246	8.744085e-8	2.021370e-3	6.125364e-5
34	220591_s_at	1555058_a_at	BC034621	LPGAT1	0.544176	8.784034e-8	2.030605e-3	5.972368e-5
35	220591_s_at	228708_at	BF438386	RAB27B	0.543629	9.101768e-8	2.104056e-3	6.011588e-5
36	220591_s_at	219754_at	NM_018301	RBM41	0.542779	9.618216e-8	2.223443e-3	6.176231e-5
37	220591_s_at	218353_at	NM_025226	RGS5	-0.542656	9.695287e-8	2.241260e-3	6.057458e-5
38	220591_s_at	212420_at	AL559590	ELF1	0.541934	1.015854e-7	2.348349e-3	6.179866e-5
39	220591_s_at	237943_at	AI820802		0.541560	1.040754e-7	2.405912e-3	6.169005e-5
40	220591_s_at	212897_at	AI738802	CDK19	0.541458	1.047595e-7	2.421725e-3	6.054312e-5
41	220591_s_at	225490_at	AW104509	ARID2	0.541032	1.076744e-7	2.489109e-3	6.070996e-5
42	220591_s_at	208022_s_at	NM_003671	CDC14B	0.539931	1.155794e-7	2.671849e-3	6.361544e-5
43	220591_s_at	243973_at	R67076		0.539594	1.181068e-7	2.730276e-3	6.349479e-5
44	220591_s_at	201291_s_at	AU159942	TOP2A	0.537866	1.319128e-7	3.049427e-3	6.930517e-5
45	220591_s_at	226480_at	N21475		0.537677	1.335065e-7	3.086270e-3	6.858379e-5
46	220591_s_at	227508_at	AI302271		0.537651	1.337296e-7	3.091427e-3	6.720494e-5
47	220591_s_at	222909_s_at	AF111116	BAG4	0.537234	1.373323e-7	3.174710e-3	6.754702e-5
48	220591_s_at	238651_at	BF512491		0.536795	1.412216e-7	3.264619e-3	6.801290e-5
49	220591_s_at	205322_s_at	AW182367	MTF1	0.536268	1.460280e-7	3.375729e-3	6.889242e-5
50	220591_s_at	200834_s_at	NM_001024		0.535477	1.535297e-7	3.549145e-3	7.098290e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation