[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5085	204716_at	NM_005436	CCDC6		coiled-coil domain containing 6
15170	225010_at	AK024913	CCDC6		coiled-coil domain containing 6

Fetching correlation data, please wait...
Getting list of correlations for id 5085.
Getting list of p-values for id 5085.
1 of 2 done.
Getting list of correlations for id 15170.
Getting list of p-values for id 15170.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.237 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204716_at	1556006_s_at	BQ025347	CSNK1A1	0.719167	1.307930e-14	6.047083e-10	6.047083e-10
2	204716_at	202742_s_at	NM_002731	PRKACB	0.691598	3.253683e-13	1.504308e-8	7.521538e-9
3	204716_at	233655_s_at	AK022964	HAUS6	0.688622	4.506142e-13	2.083370e-8	6.944565e-9
4	225010_at	1557954_at	BM757251	TXLNG	0.686841	5.465784e-13	2.527051e-8	6.317627e-9
5	204716_at	243619_at	R91766	FGFR1OP2	0.683133	8.133962e-13	3.760656e-8	7.521312e-9
6	204716_at	210568_s_at	BC001052	RECQL	0.680194	1.110077e-12	5.132329e-8	8.553881e-9
7	204716_at	241734_at	AI391443	SRFBP1	0.675117	1.883730e-12	8.709238e-8	1.244177e-8
8	204716_at	225971_at	AI741411	DDHD1	0.674226	2.064721e-12	9.546030e-8	1.193254e-8
9	225010_at	225327_at	AB037791	KIAA1370	0.670250	3.097160e-12	1.431941e-7	1.591046e-8
10	204716_at	235440_at	BE780878	SPTY2D1	0.670169	3.122683e-12	1.443741e-7	1.443741e-8
11	204716_at	1555193_a_at	BC020626	ZNF277	0.667446	4.107208e-12	1.898926e-7	1.726297e-8
12	204716_at	225470_at	AL529634	NUP35	0.667127	4.240343e-12	1.960480e-7	1.633733e-8
13	204716_at	1554456_a_at	BC010363	LINS1	0.663973	5.801666e-12	2.682342e-7	2.063340e-8
14	204716_at	202543_s_at	BC005359	GMFB	0.661392	7.477518e-12	3.457156e-7	2.469397e-8
15	204716_at	235648_at	AA742659	ZNF567	0.653714	1.568025e-11	7.249608e-7	4.833072e-8
16	204716_at	212398_at	AI057093	RDX	0.651396	1.952780e-11	9.028483e-7	5.642802e-8
17	225010_at	200681_at	NM_006708	GLO1	0.650721	2.080750e-11	9.620140e-7	5.658906e-8
18	204716_at	218577_at	NM_017768	LRRC40	0.648118	2.654482e-11	1.227273e-6	6.818184e-8
19	204716_at	224206_x_at	AF155508	MYNN	0.645999	3.231002e-11	1.493822e-6	7.862219e-8
20	225010_at	222559_s_at	T79568	RPRD1A	0.643455	4.082217e-11	1.887372e-6	9.436862e-8
21	204716_at	223255_at	AA642341	G2E3	0.642721	4.365507e-11	2.018348e-6	9.611183e-8
22	204716_at	213024_at	BF593908	TMF1	0.641594	4.837524e-11	2.236581e-6	1.016628e-7
23	225010_at	201112_s_at	NM_001316	CSE1L	0.639915	5.632664e-11	2.604206e-6	1.132263e-7
24	225010_at	225910_at	BF514723	HELZ	0.635855	8.106380e-11	3.747904e-6	1.561627e-7
25	225010_at	201385_at	NM_001358	DHX15	0.635636	8.265713e-11	3.821570e-6	1.528628e-7
26	204716_at	223079_s_at	AI828035	GLS	0.634225	9.368198e-11	4.331293e-6	1.665882e-7
27	204716_at	238469_at	BE620374	OGFRL1	0.633312	1.015466e-10	4.694905e-6	1.738854e-7
28	204716_at	204645_at	NM_001241	CCNT2	0.633088	1.035793e-10	4.788883e-6	1.710315e-7
29	225010_at	216221_s_at	D87078	PUM2	0.632466	1.094019e-10	5.058089e-6	1.744169e-7
30	204716_at	233899_x_at	AK024296	ZBTB10	0.631943	1.145511e-10	5.296156e-6	1.765385e-7
31	204716_at	235980_at	AA767763	PIK3CA	0.631456	1.195451e-10	5.527046e-6	1.782918e-7
32	204716_at	218073_s_at	NM_018087	TMEM48	0.630261	1.327162e-10	6.135999e-6	1.917500e-7
33	204716_at	210257_x_at	AF212995	CUL4B	0.629499	1.418251e-10	6.557144e-6	1.987013e-7
34	225010_at	227022_at	AI817388	GNPDA2	0.629238	1.450711e-10	6.707218e-6	1.972711e-7
35	204716_at	212373_at	AW139179	FEM1B	0.628924	1.490868e-10	6.892878e-6	1.969394e-7
36	204716_at	224725_at	AB037744	MIB1	0.627770	1.647705e-10	7.618000e-6	2.116111e-7
37	204716_at	1557433_at	BU687162		0.626380	1.857497e-10	8.587951e-6	2.321068e-7
38	225010_at	208706_s_at	AK026933	EIF5	0.625632	1.980775e-10	9.157913e-6	2.409977e-7
39	225010_at	201386_s_at	AF279891	DHX15	0.625424	2.016459e-10	9.322898e-6	2.390487e-7
40	204716_at	219793_at	NM_022133	SNX16	0.624405	2.200325e-10	1.017298e-5	2.543246e-7
41	225010_at	216511_s_at	AJ270770	TCF7L2	0.621986	2.702951e-10	1.249682e-5	3.048006e-7
42	204716_at	226094_at	AI401379	PIK3C2A	0.621641	2.783054e-10	1.286717e-5	3.063613e-7
43	204716_at	205140_at	NM_003838	FPGT	0.621486	2.819701e-10	1.303660e-5	3.031769e-7
44	204716_at	235000_at	T86629	LPP	0.619340	3.378351e-10	1.561947e-5	3.549879e-7
45	204716_at	226990_at	AI798775	CAPRIN1	0.618895	3.506723e-10	1.621298e-5	3.602885e-7
46	204716_at	1559094_at	AK095307	FBXO9	0.618543	3.611750e-10	1.669857e-5	3.630123e-7
47	204716_at	219767_s_at	NM_005111	CRYZL1	0.617777	3.850499e-10	1.780240e-5	3.787744e-7
48	204716_at	231863_at	AF161419	ING3	0.617739	3.862795e-10	1.785925e-5	3.720676e-7
49	204716_at	219834_at	NM_024744	ALS2CR8	0.617082	4.080075e-10	1.886382e-5	3.849759e-7
50	204716_at	235025_at	AW196959	WDR89	0.616999	4.108325e-10	1.899443e-5	3.798886e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation