[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
12789	220388_at	NM_024777	FER1L4		fer-1-like 4 (C. elegans)
13528	222245_s_at	AF218012	FER1L4		fer-1-like 4 (C. elegans)

Fetching correlation data, please wait...
Getting list of correlations for id 12789.
Getting list of p-values for id 12789.
1 of 2 done.
Getting list of correlations for id 13528.
Getting list of p-values for id 13528.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.175 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	222245_s_at	201286_at	Z48199	SDC1	0.708209	4.905415e-14	2.267970e-9	2.267970e-9
2	222245_s_at	201287_s_at	NM_002997	SDC1	0.697857	1.619313e-13	7.486731e-9	3.743365e-9
3	222245_s_at	229721_x_at	AI655697	DERL3	0.683552	7.778369e-13	3.596251e-8	1.198750e-8
4	222245_s_at	219888_at	NM_003116	SPAG4	0.672038	2.582772e-12	1.194119e-7	2.985297e-8
5	222245_s_at	212314_at	AB018289	SEL1L3	0.627123	1.742302e-10	8.055361e-6	1.611072e-6
6	222245_s_at	221651_x_at	BC005332		0.610370	7.087729e-10	3.276940e-5	5.461567e-6
7	222245_s_at	228897_at	AI005676	DERL3	0.600601	1.547722e-9	7.155739e-5	1.022248e-5
8	222245_s_at	221671_x_at	M63438		0.583101	5.882590e-9	2.719757e-4	3.399696e-5
9	222245_s_at	215946_x_at	AL022324	IGLL3	0.580580	7.084394e-9	3.275399e-4	3.639332e-5
10	222245_s_at	222838_at	AL121985	SLAMF7	0.578983	7.962944e-9	3.681588e-4	3.681588e-5
11	222245_s_at	235965_at	BF513674		0.577990	8.560907e-9	3.958050e-4	3.598227e-5
12	222245_s_at	206150_at	NM_001242	CD27	0.569441	1.581134e-8	7.310213e-4	6.091844e-5
13	222245_s_at	204269_at	NM_006875	PIM2	0.566515	1.942744e-8	8.982085e-4	6.909296e-5
14	222245_s_at	215379_x_at	AV698647		0.556911	3.767249e-8	1.741750e-3	1.244107e-4
15	222245_s_at	211798_x_at	AB001733	IGLJ3	0.555507	4.143097e-8	1.915519e-3	1.277013e-4
16	222245_s_at	224404_s_at	AF343662	FCRL5	0.552626	5.028783e-8	2.325007e-3	1.453130e-4
17	222245_s_at	216853_x_at	AF234255		0.542620	9.717552e-8	4.492813e-3	2.642831e-4
18	222245_s_at	215121_x_at	AA680302		0.542081	1.006291e-7	4.652484e-3	2.584713e-4
19	222245_s_at	214836_x_at	BG536224		0.539983	1.151909e-7	5.325735e-3	2.803019e-4
20	222245_s_at	227189_at	AB046819	CPNE5	0.539713	1.172065e-7	5.418925e-3	2.709463e-4
21	222245_s_at	212311_at	AA522514	SEL1L3	0.539638	1.177735e-7	5.445140e-3	2.592924e-4
22	222245_s_at	213502_x_at	AA398569	LOC91316	0.534905	1.591824e-7	7.359640e-3	3.345291e-4
23	222245_s_at	234366_x_at	AF103591		0.528024	2.446904e-7	1.131302e-2	4.918703e-4
24	220388_at	204020_at	BF739943	PURA	-0.524730	2.996093e-7	1.385213e-2	5.771723e-4
25	222245_s_at	209138_x_at	M87790		0.524501	3.038187e-7	1.404675e-2	5.618701e-4
26	222245_s_at	1554208_at	BC032248	MEI1	0.521334	3.683098e-7	1.702843e-2	6.549398e-4
27	222245_s_at	211881_x_at	AB014341	IGLJ3	0.521134	3.727978e-7	1.723593e-2	6.383679e-4
28	222245_s_at	226150_at	BF111651	PPAPDC1B	0.518053	4.487012e-7	2.074525e-2	7.409019e-4
29	222245_s_at	207734_at	NM_017773	LAX1	0.517307	4.691427e-7	2.169035e-2	7.479429e-4
30	222245_s_at	216517_at	Z00008		0.516132	5.031754e-7	2.326381e-2	7.754604e-4
31	222245_s_at	231124_x_at	AI524095	LY9	0.515430	5.246012e-7	2.425441e-2	7.824004e-4
32	222245_s_at	1569040_s_at	AA632139	FLJ40330	0.511763	6.513192e-7	3.011309e-2	9.410342e-4
33	222245_s_at	221253_s_at	NM_030810	TXNDC5	0.509711	7.343235e-7	3.395071e-2	1.028809e-3
34	220388_at	223438_s_at	BC004162	PPARA	-0.509123	7.599175e-7	3.513403e-2	1.033354e-3
35	222245_s_at	214677_x_at	X57812		0.507798	8.206779e-7	3.794322e-2	1.084092e-3
36	220388_at	225858_s_at	N30645	XIAP	-0.506058	9.074132e-7	4.195334e-2	1.165371e-3
37	220388_at	212498_at	AF056433		-0.501384	1.185418e-6	5.480663e-2	1.481260e-3
38	222245_s_at	234884_x_at	L21961	IGL@	0.500642	1.236353e-6	5.716153e-2	1.504251e-3
39	222245_s_at	216365_x_at	AF047245		0.499589	1.312178e-6	6.066725e-2	1.555571e-3
40	222245_s_at	230011_at	AW195720	MEI1	0.499558	1.314416e-6	6.077072e-2	1.519268e-3
41	220388_at	226254_s_at	AI912523	KIAA1430	-0.499003	1.356213e-6	6.270315e-2	1.529345e-3
42	222245_s_at	224795_x_at	AW575927		0.496875	1.528340e-6	7.066129e-2	1.682412e-3
43	222245_s_at	219118_at	NM_016594	FKBP11	0.495084	1.688851e-6	7.808236e-2	1.815869e-3
44	222245_s_at	217227_x_at	X93006		0.494400	1.754352e-6	8.111073e-2	1.843426e-3
45	222245_s_at	223565_at	AF151024	MGC29506	0.494262	1.767829e-6	8.173382e-2	1.816307e-3
46	222245_s_at	1554538_at	BC018208	RHOF	0.493894	1.804210e-6	8.341582e-2	1.813387e-3
47	222245_s_at	230888_at	AW300278	WDR91	0.492301	1.970297e-6	9.109471e-2	1.938185e-3
48	222245_s_at	206641_at	NM_001192	TNFRSF17	0.492204	1.980927e-6	9.158618e-2	1.908045e-3
49	222245_s_at	1560818_at	AI138766		0.487568	2.552940e-6	1.180326e-1	2.408830e-3
50	222245_s_at	237625_s_at	BG548679	IGKC	0.486220	2.746574e-6	1.269851e-1	2.539702e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation