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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1426	1567224_at	U29113	HMGA2		high mobility group AT-hook 2
6314	208025_s_at	NM_003483	HMGA2		high mobility group AT-hook 2

Fetching correlation data, please wait...
Getting list of correlations for id 1426.
Getting list of p-values for id 1426.
1 of 2 done.
Getting list of correlations for id 6314.
Getting list of p-values for id 6314.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.178 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208025_s_at	228323_at	BF248364	CASC5	0.676361	1.656448e-12	7.658421e-8	7.658421e-8
2	208025_s_at	235759_at	AI095542		0.672810	2.387199e-12	1.103697e-7	5.518487e-8
3	208025_s_at	227231_at	AI991996	KIAA1211	0.670148	3.129203e-12	1.446756e-7	4.822519e-8
4	208025_s_at	226980_at	AK001166	DEPDC1B	0.649404	2.354314e-11	1.088494e-6	2.721234e-7
5	1567224_at	232229_at	AK024331	SETX	0.640372	5.404537e-11	2.498733e-6	4.997467e-7
6	208025_s_at	219787_s_at	NM_018098	ECT2	0.636159	7.889890e-11	3.647812e-6	6.079687e-7
7	208025_s_at	204244_s_at	NM_006716	DBF4	0.633668	9.840731e-11	4.549764e-6	6.499662e-7
8	208025_s_at	227801_at	N90779	TRIM59	0.630087	1.347392e-10	6.229531e-6	7.786913e-7
9	208025_s_at	238756_at	AI860012	GAS2L3	0.628223	1.584345e-10	7.325063e-6	8.138959e-7
10	1567224_at	225125_at	BF978280	MMGT1	-0.623858	2.305292e-10	1.065829e-5	1.065829e-6
11	208025_s_at	218252_at	NM_018204	CKAP2	0.615637	4.600183e-10	2.126848e-5	1.933499e-6
12	208025_s_at	231855_at	AB040957	KIAA1524	0.608854	8.014520e-10	3.705433e-5	3.087861e-6
13	208025_s_at	204709_s_at	NM_004856	KIF23	0.608745	8.085696e-10	3.738341e-5	2.875647e-6
14	208025_s_at	230165_at	N31731	SGOL2	0.608181	8.462860e-10	3.912719e-5	2.794799e-6
15	208025_s_at	225711_at	AA654338	ARL6IP6	0.602379	1.345263e-9	6.219690e-5	4.146460e-6
16	208025_s_at	242496_at	T57776		0.599537	1.682473e-9	7.778745e-5	4.861715e-6
17	1567224_at	216347_s_at	AK023188	PPP1R13B	-0.595691	2.269230e-9	1.049156e-4	6.171505e-6
18	208025_s_at	215134_at	H84390	PI4K2A	0.594780	2.434647e-9	1.125635e-4	6.253527e-6
19	208025_s_at	205667_at	NM_000553	WRN	0.593639	2.657740e-9	1.228779e-4	6.467260e-6
20	208025_s_at	228729_at	N90191	CCNB1	0.593566	2.672843e-9	1.235762e-4	6.178811e-6
21	1567224_at	206868_at	NM_014725	STARD8	-0.592158	2.976915e-9	1.376347e-4	6.554032e-6
22	1567224_at	223144_s_at	BC000764	AKIRIN2	-0.590590	3.354410e-9	1.550878e-4	7.049446e-6
23	1567224_at	230566_at	AI806805	C22orf27	0.585315	4.989892e-9	2.307027e-4	1.003055e-5
24	208025_s_at	235545_at	AI810054	DEPDC1	0.584136	5.447731e-9	2.518704e-4	1.049460e-5
25	1567224_at	216232_s_at	AI697055	GCN1L1	-0.582801	6.014418e-9	2.780706e-4	1.112282e-5
26	208025_s_at	218875_s_at	NM_012177	FBXO5	0.582463	6.166828e-9	2.851171e-4	1.096604e-5
27	1567224_at	1553644_at	NM_152592	C14orf49	0.580187	7.291365e-9	3.371090e-4	1.248552e-5
28	208025_s_at	204727_at	AW772140	WDHD1	0.579216	7.828515e-9	3.619436e-4	1.292656e-5
29	1567224_at	224913_s_at	AA877820	TIMM50	-0.578970	7.970706e-9	3.685176e-4	1.270750e-5
30	1567224_at	215541_s_at	AK023345	DIAPH1	0.578661	8.152346e-9	3.769156e-4	1.256385e-5
31	1567224_at	206936_x_at	NM_022335		0.578515	8.239684e-9	3.809536e-4	1.228882e-5
32	208025_s_at	212839_s_at	AK024044	TROVE2	0.578339	8.346015e-9	3.858697e-4	1.205843e-5
33	208025_s_at	222958_s_at	AK000490	DEPDC1	0.577700	8.743611e-9	4.042521e-4	1.225006e-5
34	208025_s_at	231967_at	AI913146	PHF20L1	0.576069	9.841391e-9	4.550069e-4	1.338255e-5
35	1567224_at	1555967_at	AA362254		-0.575910	9.955014e-9	4.602601e-4	1.315029e-5
36	1567224_at	200945_s_at	NM_014933	SEC31A	-0.574697	1.086597e-8	5.023773e-4	1.395493e-5
37	208025_s_at	204720_s_at	AV729634	DNAJC6	0.574598	1.094358e-8	5.059655e-4	1.367474e-5
38	1567224_at	201903_at	NM_003365	UQCRC1	-0.574485	1.103275e-8	5.100882e-4	1.342337e-5
39	1567224_at	208515_at	NM_003521	HIST1H2BM	0.573604	1.175315e-8	5.433953e-4	1.393321e-5
40	208025_s_at	229097_at	AI813331	DIAPH3	0.572924	1.233993e-8	5.705245e-4	1.426311e-5
41	208025_s_at	214710_s_at	BE407516	CCNB1	0.570498	1.466993e-8	6.782496e-4	1.654267e-5
42	1567224_at	203183_s_at	NM_003076	SMARCD1	0.569775	1.544182e-8	7.139369e-4	1.699850e-5
43	208025_s_at	223257_at	AI823905	G2E3	0.569487	1.575947e-8	7.286232e-4	1.694473e-5
44	1567224_at	224203_at	AF222345	SUFU	0.568215	1.724042e-8	7.970935e-4	1.811576e-5
45	1567224_at	215482_s_at	AJ011307	EIF2B4	-0.567236	1.846996e-8	8.539402e-4	1.897645e-5
46	208025_s_at	231839_at	BF675750	PDE12	0.567023	1.874787e-8	8.667888e-4	1.884324e-5
47	1567224_at	1555611_s_at	BC012487	MBD1	0.566993	1.878715e-8	8.686052e-4	1.848096e-5
48	1567224_at	242151_at	AW294083		0.566682	1.920191e-8	8.877811e-4	1.849544e-5
49	208025_s_at	205190_at	NM_002670	PLS1	0.566267	1.976713e-8	9.139136e-4	1.865130e-5
50	1567224_at	201906_s_at	NM_005808	CTDSPL	-0.566020	2.011300e-8	9.299042e-4	1.859808e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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