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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
12935	220966_x_at	NM_030978	ARPC5L		actin related protein 2/3 complex, subunit 5-like
16716	226914_at	AU158936	ARPC5L		actin related protein 2/3 complex, subunit 5-like
16717	226915_s_at	AU158936	ARPC5L		actin related protein 2/3 complex, subunit 5-like

Fetching correlation data, please wait...
Getting list of correlations for id 12935.
Getting list of p-values for id 12935.
1 of 3 done.
Getting list of correlations for id 16716.
Getting list of p-values for id 16716.
2 of 3 done.
Getting list of correlations for id 16717.
Getting list of p-values for id 16717.
3 of 3 done.
Calculating corrections for multiple testing (n=69351), please wait...
Done; whole program took 0.291 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	226915_s_at	220966_x_at	NM_030978	ARPC5L	0.859310	1.348881e-25	9.354624e-21	9.354624e-21
2	220966_x_at	226915_s_at	AU158936	ARPC5L	0.859310	1.348881e-25	9.354624e-21	4.677312e-21
3	220966_x_at	203082_at	NM_014753	BMS1	0.794255	1.979185e-19	1.372585e-14	4.575282e-15
4	220966_x_at	203606_at	NM_004553	NDUFS6	0.768760	1.365786e-17	9.471862e-13	2.367965e-13
5	220966_x_at	201405_s_at	NM_006833	COPS6	0.762713	3.446522e-17	2.390197e-12	4.780395e-13
6	220966_x_at	203515_s_at	NM_006556	PMVK	0.762582	3.515451e-17	2.438000e-12	4.063334e-13
7	226915_s_at	203082_at	NM_014753	BMS1	0.760887	4.533325e-17	3.143906e-12	4.491294e-13
8	226915_s_at	48531_at	AA522816	TNIP2	0.759454	5.611953e-17	3.891945e-12	4.864932e-13
9	220966_x_at	202550_s_at	NM_004738	VAPB	0.759080	5.931719e-17	4.113707e-12	4.570785e-13
10	220966_x_at	200882_s_at	NM_002810	PSMD4	0.757614	7.364788e-17	5.107554e-12	5.107554e-13
11	220966_x_at	202417_at	NM_012289	KEAP1	0.757090	7.954662e-17	5.516638e-12	5.015125e-13
12	226915_s_at	202417_at	NM_012289	KEAP1	0.755999	9.330876e-17	6.471056e-12	5.392547e-13
13	220966_x_at	224776_at	BF513102	AGPAT6	0.754733	1.121921e-16	7.780631e-12	5.985101e-13
14	226915_s_at	224776_at	BF513102	AGPAT6	0.754260	1.201397e-16	8.331810e-12	5.951293e-13
15	226914_at	222203_s_at	AK023625	RDH14	0.751391	1.814829e-16	1.258602e-11	8.390681e-13
16	220966_x_at	1553974_at	BC030758		0.750151	2.165308e-16	1.501663e-11	9.385392e-13
17	226915_s_at	202093_s_at	NM_019088	PAF1	0.748601	2.696083e-16	1.869761e-11	1.099859e-12
18	220966_x_at	219598_s_at	NM_016104	RWDD1	0.748489	2.739011e-16	1.899531e-11	1.055295e-12
19	226915_s_at	209609_s_at	BC004517	MRPL9	0.747467	3.161930e-16	2.192830e-11	1.154121e-12
20	226915_s_at	202550_s_at	NM_004738	VAPB	0.746920	3.413553e-16	2.367333e-11	1.183667e-12
21	220966_x_at	227625_s_at	AI476536	STUB1	0.743578	5.426939e-16	3.763637e-11	1.792208e-12
22	226915_s_at	202256_at	BF793888	CD2BP2	0.740123	8.699284e-16	6.033040e-11	2.742291e-12
23	220966_x_at	228662_at	AI492369	SOCS7	0.738836	1.035132e-15	7.178746e-11	3.121194e-12
24	220966_x_at	201204_s_at	AA706065	RRBP1	0.738639	1.063054e-15	7.372384e-11	3.071827e-12
25	220966_x_at	202093_s_at	NM_019088	PAF1	0.738148	1.135554e-15	7.875181e-11	3.150072e-12
26	220966_x_at	204868_at	NM_001545	ICT1	0.736818	1.356802e-15	9.409561e-11	3.619062e-12
27	220966_x_at	223356_s_at	BG529919	MTIF3	0.734825	1.768302e-15	1.226335e-10	4.541982e-12
28	220966_x_at	219244_s_at	NM_022163	MRPL46	0.734638	1.812531e-15	1.257009e-10	4.489317e-12
29	220966_x_at	218993_at	NM_018146	RNMTL1	0.730598	3.076975e-15	2.133913e-10	7.358320e-12
30	226915_s_at	201232_s_at	NM_002817	PSMD13	0.729859	3.386132e-15	2.348317e-10	7.827722e-12
31	226915_s_at	203262_s_at	NM_004699	FAM50A	0.729629	3.488073e-15	2.419014e-10	7.803269e-12
32	226915_s_at	225554_s_at	AA131793	ANAPC7	0.729055	3.756536e-15	2.605195e-10	8.141235e-12
33	220966_x_at	218336_at	NM_012394	PFDN2	0.726028	5.535690e-15	3.839057e-10	1.163350e-11
34	226915_s_at	213203_at	AI633709	SNAPC5	0.725536	5.892173e-15	4.086281e-10	1.201847e-11
35	226915_s_at	221495_s_at	AF322111	TCF25	0.723028	8.087623e-15	5.608848e-10	1.602528e-11
36	220966_x_at	223294_at	BC001220	CXorf26	0.721493	9.800238e-15	6.796563e-10	1.887934e-11
37	226915_s_at	203606_at	NM_004553	NDUFS6	0.720983	1.044255e-14	7.242012e-10	1.957300e-11
38	226915_s_at	217913_at	NM_013245	VPS4A	0.719150	1.310639e-14	9.089413e-10	2.391951e-11
39	220966_x_at	209609_s_at	BC004517	MRPL9	0.717241	1.657542e-14	1.149522e-9	2.947491e-11
40	226915_s_at	201405_s_at	NM_006833	COPS6	0.716464	1.822593e-14	1.263986e-9	3.159966e-11
41	220966_x_at	227962_at	BF435852	ACOX1	0.716056	1.915564e-14	1.328463e-9	3.240153e-11
42	226915_s_at	57539_at	AA535065		0.715435	2.065910e-14	1.432729e-9	3.411260e-11
43	220966_x_at	205672_at	NM_000380	XPA	0.714148	2.414697e-14	1.674616e-9	3.894456e-11
44	226915_s_at	227873_at	BE547587	TXNDC15	0.713070	2.749944e-14	1.907113e-9	4.334349e-11
45	220966_x_at	202042_at	NM_002109	HARS	0.712804	2.839066e-14	1.968921e-9	4.375379e-11
46	220966_x_at	219575_s_at	NM_022341		0.712558	2.924431e-14	2.028122e-9	4.408962e-11
47	220966_x_at	48531_at	AA522816	TNIP2	0.712241	3.037557e-14	2.106576e-9	4.482077e-11
48	226915_s_at	224634_at	AI911518	GPATCH4	0.712176	3.061583e-14	2.123238e-9	4.423413e-11
49	220966_x_at	224634_at	AI911518	GPATCH4	0.711611	3.275771e-14	2.271780e-9	4.636286e-11
50	220966_x_at	233049_x_at	AF217968	STUB1	0.710664	3.667343e-14	2.543339e-9	5.086677e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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