[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6445	208490_x_at	NM_003522	HIST1H2BF		histone cluster 1, H2bf

Fetching correlation data, please wait...
Getting list of correlations for id 6445.
Getting list of p-values for id 6445.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.135 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208490_x_at	208523_x_at	NM_003525	HIST1H2BI	0.823152	7.433455e-22	1.718392e-17	1.718392e-17
2	208490_x_at	208527_x_at	NM_003523	HIST1H2BE	0.790992	3.515439e-19	8.126640e-15	4.063320e-15
3	208490_x_at	208579_x_at	NM_017445		0.789384	4.648785e-19	1.074660e-14	3.582199e-15
4	208490_x_at	222067_x_at	AL353759	HIST1H2BD	0.695365	2.142354e-13	4.952479e-9	1.238120e-9
5	208490_x_at	203210_s_at	NM_007370	RFC5	0.644112	3.843949e-11	8.886057e-7	1.777211e-7
6	208490_x_at	201073_s_at	AL040633	SMARCC1	0.643405	4.101059e-11	9.480418e-7	1.580070e-7
7	208490_x_at	219978_s_at	NM_018454	NUSAP1	0.641022	5.095597e-11	1.177949e-6	1.682785e-7
8	208490_x_at	201303_at	NM_014740	EIF4A3	0.640079	5.549570e-11	1.282894e-6	1.603618e-7
9	208490_x_at	202483_s_at	NM_002882	RANBP1	0.638317	6.504278e-11	1.503594e-6	1.670660e-7
10	208490_x_at	208066_s_at	NM_001514	GTF2B	0.631330	1.208707e-10	2.794169e-6	2.794169e-7
11	208490_x_at	208583_x_at	NM_021066	HIST1H2AJ	0.627341	1.709816e-10	3.952583e-6	3.593257e-7
12	208490_x_at	217774_s_at	NM_016404	TRMT112	0.622467	2.594978e-10	5.998811e-6	4.999009e-7
13	208490_x_at	208739_x_at	L76416	SUMO2	0.620156	3.154581e-10	7.292446e-6	5.609574e-7
14	208490_x_at	209911_x_at	BC002842	HIST1H2BD	0.619722	3.271770e-10	7.563351e-6	5.402393e-7
15	208490_x_at	214290_s_at	AI313324		0.617475	3.948867e-10	9.128597e-6	6.085731e-7
16	208490_x_at	208819_at	BC002977	RAB8A	0.617157	4.054646e-10	9.373125e-6	5.858203e-7
17	208490_x_at	235582_at	BG388715	E2F2	0.615659	4.591733e-10	1.061471e-5	6.243946e-7
18	208490_x_at	200003_s_at	NM_000991	RPL28	0.609163	7.816953e-10	1.807045e-5	1.003914e-6
19	208490_x_at	208932_at	BC001416	PPP4C	0.608613	8.172637e-10	1.889269e-5	9.943519e-7
20	208490_x_at	219126_at	NM_018288	PHF10	0.602995	1.281186e-9	2.961717e-5	1.480859e-6
21	208490_x_at	209760_at	AL136932	KIAA0922	0.601063	1.492425e-9	3.450039e-5	1.642876e-6
22	208490_x_at	209825_s_at	BC002906	UCK2	0.595411	2.318988e-9	5.360805e-5	2.436729e-6
23	208490_x_at	222250_s_at	AK001363	INTS7	0.595056	2.383267e-9	5.509399e-5	2.395391e-6
24	208490_x_at	209201_x_at	L01639	CXCR4	0.591509	3.127960e-9	7.230905e-5	3.012877e-6
25	208490_x_at	202697_at	NM_007006	NUDT21	0.591219	3.197915e-9	7.392620e-5	2.957048e-6
26	208490_x_at	223229_at	AB032931	UBE2T	0.590951	3.263710e-9	7.544718e-5	2.901814e-6
27	208490_x_at	212949_at	D38553	NCAPH	0.590672	3.333605e-9	7.706295e-5	2.854183e-6
28	208490_x_at	212075_s_at	AI161318	CSNK2A1	0.589544	3.631472e-9	8.394875e-5	2.998170e-6
29	208490_x_at	212789_at	AI796581	NCAPD3	0.587919	4.105208e-9	9.490008e-5	3.272417e-6
30	208490_x_at	201580_s_at	AL544094	TMX4	0.583536	5.695918e-9	1.316725e-4	4.389084e-6
31	208490_x_at	222458_s_at	AI205764	AKIRIN1	0.582347	6.219750e-9	1.437820e-4	4.638128e-6
32	208490_x_at	220200_s_at	NM_020382	SETD8	0.580747	6.998110e-9	1.617753e-4	5.055479e-6
33	208490_x_at	227787_s_at	AI026938	MED30	0.579546	7.642171e-9	1.766641e-4	5.353457e-6
34	208490_x_at	202954_at	NM_007019	UBE2C	0.579338	7.758912e-9	1.793628e-4	5.275376e-6
35	208490_x_at	223416_at	AF184213	SF3B14	0.576142	9.789715e-9	2.263088e-4	6.465967e-6
36	208490_x_at	211919_s_at	AF348491	CXCR4	0.575910	9.954958e-9	2.301288e-4	6.392465e-6
37	208490_x_at	209208_at	AF059752	MPDU1	0.574939	1.067778e-8	2.468382e-4	6.671302e-6
38	208490_x_at	200728_at	BE566290	ACTR2	0.574625	1.092211e-8	2.524864e-4	6.644380e-6
39	208490_x_at	204768_s_at	NM_004111	FEN1	0.572776	1.247203e-8	2.883159e-4	7.392716e-6
40	208490_x_at	217799_x_at	NM_003344	UBE2H	0.572702	1.253796e-8	2.898400e-4	7.246001e-6
41	208490_x_at	1560339_s_at	AK095320	NAP1L4	0.572471	1.274636e-8	2.946576e-4	7.186770e-6
42	208490_x_at	214995_s_at	BF508948		0.571219	1.393657e-8	3.221717e-4	7.670755e-6
43	208490_x_at	201051_at	BE560202	ANP32A	0.570738	1.442223e-8	3.333986e-4	7.753456e-6
44	208490_x_at	209162_s_at	U82756	PRPF4	0.569985	1.521318e-8	3.516831e-4	7.992798e-6
45	208490_x_at	213288_at	AI761250	MBOAT2	0.569286	1.598501e-8	3.695254e-4	8.211676e-6
46	208490_x_at	222401_s_at	AL550722	TMEM50A	0.568489	1.691018e-8	3.909127e-4	8.498103e-6
47	208490_x_at	216538_at	AL049351		0.568130	1.734365e-8	4.009331e-4	8.530491e-6
48	208490_x_at	204023_at	NM_002916	RFC4	0.566739	1.912505e-8	4.421139e-4	9.210706e-6
49	208490_x_at	225655_at	AK025578	UHRF1	0.566312	1.970597e-8	4.555429e-4	9.296794e-6
50	208490_x_at	202243_s_at	NM_002796	PSMB4	0.565947	2.021563e-8	4.673246e-4	9.346492e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation