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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6453	208527_x_at	NM_003523	HIST1H2BE		histone cluster 1, H2be

Fetching correlation data, please wait...
Getting list of correlations for id 6453.
Getting list of p-values for id 6453.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.156 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208527_x_at	208579_x_at	NM_017445		0.889066	1.469512e-29	3.397072e-25	3.397072e-25
2	208527_x_at	222067_x_at	AL353759	HIST1H2BD	0.827644	2.848355e-22	6.584542e-18	3.292271e-18
3	208527_x_at	208490_x_at	NM_003522	HIST1H2BF	0.790992	3.515439e-19	8.126640e-15	2.708880e-15
4	208527_x_at	208523_x_at	NM_003525	HIST1H2BI	0.762476	3.571782e-17	8.256888e-13	2.064222e-13
5	208527_x_at	209911_x_at	BC002842	HIST1H2BD	0.723295	7.820688e-15	1.807908e-10	3.615817e-11
6	208527_x_at	208583_x_at	NM_021066	HIST1H2AJ	0.665315	5.079847e-12	1.174308e-7	1.957180e-8
7	208527_x_at	214290_s_at	AI313324		0.662290	6.847789e-12	1.583003e-7	2.261433e-8
8	208527_x_at	208546_x_at	NM_003524	HIST1H2BH	0.629065	1.472767e-10	3.404596e-6	4.255745e-7
9	208527_x_at	225253_s_at	AI632244		0.616146	4.410108e-10	1.019485e-5	1.132761e-6
10	208527_x_at	209796_s_at	BC001027	CNPY2	0.616094	4.429424e-10	1.023950e-5	1.023950e-6
11	208527_x_at	216538_at	AL049351		0.609730	7.465526e-10	1.725806e-5	1.568914e-6
12	208527_x_at	209825_s_at	BC002906	UCK2	0.609049	7.889592e-10	1.823837e-5	1.519864e-6
13	208527_x_at	202697_at	NM_007006	NUDT21	0.606955	9.340295e-10	2.159196e-5	1.660920e-6
14	208527_x_at	218046_s_at	NM_016065	MRPS16	0.603059	1.274689e-9	2.946698e-5	2.104784e-6
15	208527_x_at	210707_x_at	U38980	PMS2L11	0.600686	1.537396e-9	3.553999e-5	2.369333e-6
16	208527_x_at	219978_s_at	NM_018454	NUSAP1	0.596729	2.094038e-9	4.840787e-5	3.025492e-6
17	208527_x_at	208765_s_at	NM_005826	HNRNPR	0.595348	2.330295e-9	5.386943e-5	3.168790e-6
18	208527_x_at	216503_s_at	AF060927	MLLT10	0.592837	2.826338e-9	6.533646e-5	3.629803e-6
19	208527_x_at	223416_at	AF184213	SF3B14	0.586044	4.725264e-9	1.092339e-4	5.749154e-6
20	208527_x_at	200003_s_at	NM_000991	RPL28	0.585538	4.907641e-9	1.134499e-4	5.672497e-6
21	208527_x_at	218280_x_at	NM_003516		0.585210	5.029145e-9	1.162587e-4	5.536131e-6
22	208527_x_at	214527_s_at	AB041836	PQBP1	0.581320	6.708903e-9	1.550897e-4	7.049533e-6
23	208527_x_at	212077_at	AL583520	CALD1	-0.581096	6.820674e-9	1.576735e-4	6.855370e-6
24	208527_x_at	223113_at	AF151030	TMEM138	0.580472	7.140842e-9	1.650749e-4	6.878119e-6
25	208527_x_at	204023_at	NM_002916	RFC4	0.577758	8.706521e-9	2.012686e-4	8.050746e-6
26	208527_x_at	216843_x_at	U38964	PMS2L1	0.574979	1.064718e-8	2.461310e-4	9.466575e-6
27	208527_x_at	204833_at	NM_004707	ATG12	0.574304	1.117761e-8	2.583929e-4	9.570106e-6
28	208527_x_at	207565_s_at	NM_001531	MR1	0.574048	1.138468e-8	2.631797e-4	9.399275e-6
29	208527_x_at	218866_s_at	NM_016310	POLR3K	0.573981	1.144000e-8	2.644585e-4	9.119258e-6
30	208527_x_at	225402_at	BG339450	TP53RK	0.573422	1.190805e-8	2.752785e-4	9.175949e-6
31	208527_x_at	200750_s_at	AF054183	RAN	0.573339	1.197905e-8	2.769196e-4	8.932891e-6
32	208527_x_at	222250_s_at	AK001363	INTS7	0.571985	1.319676e-8	3.050695e-4	9.533422e-6
33	208527_x_at	1565717_s_at	BE930017		0.570607	1.455711e-8	3.365167e-4	1.019748e-5
34	208527_x_at	213575_at	AA831170	TRA2A	0.567365	1.830299e-8	4.231102e-4	1.244442e-5
35	208527_x_at	226936_at	BG492359	CENPW	0.567254	1.844624e-8	4.264216e-4	1.218348e-5
36	208527_x_at	223078_s_at	AF177171	TMOD3	0.566641	1.925616e-8	4.451446e-4	1.236513e-5
37	208527_x_at	202483_s_at	NM_002882	RANBP1	0.566217	1.983740e-8	4.585811e-4	1.239408e-5
38	208527_x_at	211352_s_at	U80737	NCOA3	0.565645	2.064629e-8	4.772802e-4	1.256001e-5
39	208527_x_at	201732_s_at	AF029346	CLCN3	0.565503	2.085297e-8	4.820581e-4	1.236046e-5
40	208527_x_at	223247_at	BC003353	MED10	0.563886	2.333710e-8	5.394838e-4	1.348710e-5
41	208527_x_at	216525_x_at	D38437	PMS2L3	0.562727	2.528905e-8	5.846069e-4	1.425870e-5
42	208527_x_at	201580_s_at	AL544094	TMX4	0.561834	2.689897e-8	6.218234e-4	1.480532e-5
43	208527_x_at	204091_at	NM_002601	PDE6D	0.561611	2.731615e-8	6.314674e-4	1.468529e-5
44	208527_x_at	225730_s_at	AI921788	THUMPD3	0.560624	2.923620e-8	6.758533e-4	1.536030e-5
45	208527_x_at	208932_at	BC001416	PPP4C	0.560432	2.962296e-8	6.847939e-4	1.521764e-5
46	208527_x_at	210223_s_at	AF010446	MR1	0.560234	3.002978e-8	6.941985e-4	1.509127e-5
47	208527_x_at	226370_at	BG149487	KLHL15	0.560043	3.042601e-8	7.033580e-4	1.496506e-5
48	208527_x_at	200869_at	NM_000980		0.559463	3.165755e-8	7.318275e-4	1.524641e-5
49	208527_x_at	224535_s_at	AB049957	MRP63	0.559014	3.264588e-8	7.546747e-4	1.540152e-5
50	208527_x_at	201541_s_at	NM_006349	ZNHIT1	0.558308	3.425858e-8	7.919556e-4	1.583911e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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