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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4750	204197_s_at	NM_004350	RUNX3		runt-related transcription factor 3
4751	204198_s_at	AA541630	RUNX3		runt-related transcription factor 3

Fetching correlation data, please wait...
Getting list of correlations for id 4750.
Getting list of p-values for id 4750.
1 of 2 done.
Getting list of correlations for id 4751.
Getting list of p-values for id 4751.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.203 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204198_s_at	1553703_at	NM_153358	ZNF791	0.737387	1.257395e-15	5.813439e-11	5.813439e-11
2	204198_s_at	45653_at	AW026481	KCTD13	0.723030	8.084962e-15	3.738001e-10	1.869001e-10
3	204198_s_at	225701_at	AK024431	AKNA	0.717148	1.676452e-14	7.750909e-10	2.583636e-10
4	204198_s_at	46323_at	AL120741	CANT1	0.712094	3.091562e-14	1.429353e-9	3.573382e-10
5	204198_s_at	231876_at	AL512757	TRIM56	0.709856	4.037332e-14	1.866620e-9	3.733240e-10
6	204197_s_at	227677_at	BF512748	JAK3	0.703930	8.086091e-14	3.738523e-9	6.230872e-10
7	204197_s_at	38269_at	AL050147	PRKD2	0.698562	1.495203e-13	6.912923e-9	9.875604e-10
8	204197_s_at	239231_at	BE464819		0.697465	1.692507e-13	7.825139e-9	9.781424e-10
9	204197_s_at	225701_at	AK024431	AKNA	0.695829	2.034016e-13	9.404069e-9	1.044897e-9
10	204198_s_at	203652_at	NM_002419	MAP3K11	0.692160	3.058132e-13	1.413897e-8	1.413897e-9
11	204197_s_at	204891_s_at	NM_005356	LCK	0.682261	8.922931e-13	4.125428e-8	3.750389e-9
12	204198_s_at	1553704_x_at	NM_153358	ZNF791	0.681419	9.754967e-13	4.510112e-8	3.758426e-9
13	204198_s_at	218387_s_at	NM_012088	PGLS	0.679689	1.170519e-12	5.411777e-8	4.162905e-9
14	204198_s_at	201321_s_at	NM_003075	SMARCC2	0.671030	2.861675e-12	1.323067e-7	9.450477e-9
15	204198_s_at	225530_at	BE396735	MOBKL2A	0.667921	3.916429e-12	1.810722e-7	1.207148e-8
16	204198_s_at	218425_at	BC000787	RNF216	0.666136	4.681315e-12	2.164359e-7	1.352725e-8
17	204198_s_at	224821_at	AL520200	ABHD14B	0.664050	5.757616e-12	2.661976e-7	1.565868e-8
18	204198_s_at	204265_s_at	NM_022107	GPSM3	0.662750	6.545387e-12	3.026194e-7	1.681219e-8
19	204198_s_at	225935_at	AI350995		0.661426	7.452819e-12	3.445736e-7	1.813545e-8
20	204198_s_at	201168_x_at	NM_004309	ARHGDIA	0.659074	9.372025e-12	4.333062e-7	2.166531e-8
21	204197_s_at	204198_s_at	AA541630	RUNX3	0.657827	1.057453e-11	4.889027e-7	2.328108e-8
22	204198_s_at	204197_s_at	NM_004350	RUNX3	0.657827	1.057453e-11	4.889027e-7	2.222285e-8
23	204198_s_at	212553_at	AK026120	RPRD2	0.657675	1.073042e-11	4.961104e-7	2.157002e-8
24	204197_s_at	226659_at	Z97832	DEF6	0.657629	1.077834e-11	4.983256e-7	2.076357e-8
25	204198_s_at	208713_at	BF724216	HNRNPUL1	0.656804	1.166908e-11	5.395081e-7	2.158033e-8
26	204197_s_at	201818_at	NM_024830	LPCAT1	0.655785	1.286828e-11	5.949521e-7	2.288277e-8
27	204198_s_at	219444_at	NM_021946	BCORL1	0.654255	1.489373e-11	6.885969e-7	2.550359e-8
28	204197_s_at	202281_at	NM_005255	GAK	0.653621	1.581991e-11	7.314176e-7	2.612206e-8
29	204198_s_at	217931_at	BC004423	CNPY3	0.651468	1.939515e-11	8.967151e-7	3.092121e-8
30	204197_s_at	228869_at	AI081246		0.651033	2.020574e-11	9.341924e-7	3.113975e-8
31	204198_s_at	212050_at	AK026913	WIPF2	0.649430	2.348681e-11	1.085889e-6	3.502868e-8
32	204197_s_at	228340_at	BE967118	TLE3	0.648893	2.469565e-11	1.141779e-6	3.568059e-8
33	204197_s_at	40420_at	AB015718	STK10	0.648061	2.668667e-11	1.233832e-6	3.738883e-8
34	204197_s_at	209879_at	AI741056	SELPLG	0.643911	3.915519e-11	1.810301e-6	5.324414e-8
35	204197_s_at	203233_at	NM_000418	IL4R	0.643732	3.979942e-11	1.840086e-6	5.257390e-8
36	204198_s_at	215497_s_at	AK023778	WDTC1	0.642672	4.385207e-11	2.027457e-6	5.631824e-8
37	204198_s_at	207890_s_at	NM_022718	MMP25	0.641379	4.932760e-11	2.280612e-6	6.163817e-8
38	204197_s_at	221732_at	AK026161	CANT1	0.641336	4.952231e-11	2.289614e-6	6.025301e-8
39	204197_s_at	209039_x_at	AF001434	EHD1	0.640698	5.247294e-11	2.426034e-6	6.220599e-8
40	204198_s_at	223201_s_at	AW205122	TMEM164	0.640369	5.405768e-11	2.499303e-6	6.248257e-8
41	204198_s_at	200601_at	U48734	ACTN4	0.637919	6.741318e-11	3.116781e-6	7.601904e-8
42	204198_s_at	212303_x_at	BG026366	KHSRP	0.637520	6.986297e-11	3.230044e-6	7.690582e-8
43	204198_s_at	214780_s_at	AK002201	MYO9B	0.635755	8.178525e-11	3.781259e-6	8.793626e-8
44	204197_s_at	40225_at	D88435	GAK	0.635167	8.617485e-11	3.984208e-6	9.055019e-8
45	204198_s_at	214895_s_at	AU135154	ADAM10	-0.634439	9.192412e-11	4.250020e-6	9.444489e-8
46	204197_s_at	203508_at	NM_001066	TNFRSF1B	0.634189	9.397764e-11	4.344962e-6	9.445570e-8
47	204197_s_at	227228_s_at	AB040942	CCDC88C	0.632839	1.058745e-10	4.895000e-6	1.041489e-7
48	204198_s_at	210076_x_at	AF151813	SERBP1	-0.631910	1.148849e-10	5.311589e-6	1.106581e-7
49	204198_s_at	213521_at	AW575379	PTPN18	0.630746	1.272118e-10	5.881509e-6	1.200308e-7
50	204198_s_at	221191_at	NM_018991	STAG3L1	0.630722	1.274708e-10	5.893483e-6	1.178697e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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