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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
770	1557258_a_at	AA994334	BCL10		B-cell CLL/lymphoma 10
5385	205263_at	AF082283	BCL10		B-cell CLL/lymphoma 10

Fetching correlation data, please wait...
Getting list of correlations for id 770.
Getting list of p-values for id 770.
1 of 2 done.
Getting list of correlations for id 5385.
Getting list of p-values for id 5385.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.192 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1557258_a_at	1566989_at	Y08266	ARID1B	0.831433	1.240745e-22	5.736459e-18	5.736459e-18
2	1557258_a_at	39966_at	AF059274	CSPG5	0.826254	3.843259e-22	1.776892e-17	8.884462e-18
3	1557258_a_at	1558208_at	AL039795	TARDBP	0.798869	8.629494e-20	3.989760e-15	1.329920e-15
4	1557258_a_at	1554108_at	AK096293		0.741585	7.131462e-16	3.297160e-11	8.242901e-12
5	1557258_a_at	205539_at	NM_006576	AVIL	0.739088	1.000633e-15	4.626328e-11	9.252655e-12
6	1557258_a_at	1555348_at	BC041175	TFAP2E	0.727824	4.400987e-15	2.034752e-10	3.391254e-11
7	205263_at	212867_at	AI040324		0.687386	5.152897e-13	2.382390e-8	3.403415e-9
8	1557258_a_at	65521_at	W74577	UBE2D4	0.674193	2.071720e-12	9.578389e-8	1.197299e-8
9	205263_at	213168_at	AU145005	SP3	0.666402	4.559044e-12	2.107829e-7	2.342032e-8
10	205263_at	203312_x_at	NM_001663	ARF6	0.660479	8.175350e-12	3.779791e-7	3.779791e-8
11	1557258_a_at	215608_at	AU144378		0.649812	2.266003e-11	1.047664e-6	9.524216e-8
12	205263_at	209214_s_at	BC004817	EWSR1	0.647113	2.914473e-11	1.347478e-6	1.122898e-7
13	205263_at	203362_s_at	NM_002358	MAD2L1	0.640716	5.238748e-11	2.422083e-6	1.863141e-7
14	1557258_a_at	1562271_x_at	AL831814	ARHGEF7	0.637143	7.225950e-11	3.340846e-6	2.386318e-7
15	205263_at	212857_x_at	BG231551	SUB1	0.631267	1.215417e-10	5.619357e-6	3.746238e-7
16	1557258_a_at	217980_s_at	NM_017840	MRPL16	-0.616099	4.427301e-10	2.046919e-5	1.279324e-6
17	205263_at	225347_at	AL520984	ARL8A	0.613016	5.710088e-10	2.640002e-5	1.552943e-6
18	205263_at	203739_at	NM_006526	ZNF217	0.606454	9.723663e-10	4.495638e-5	2.497577e-6
19	205263_at	227786_at	AI026938	MED30	0.600468	1.563887e-9	7.230475e-5	3.805513e-6
20	205263_at	219178_at	NM_024638	QTRTD1	0.599610	1.672776e-9	7.733914e-5	3.866957e-6
21	205263_at	202666_s_at	NM_004301	ACTL6A	0.597220	2.015721e-9	9.319483e-5	4.437849e-6
22	205263_at	219493_at	NM_024745	SHCBP1	0.596031	2.210348e-9	1.021932e-4	4.645146e-6
23	205263_at	201795_at	NM_002296	LBR	0.594819	2.427234e-9	1.122207e-4	4.879162e-6
24	1557258_a_at	244032_at	AA740675		0.591111	3.224208e-9	1.490680e-4	6.211168e-6
25	205263_at	1559584_a_at	BC025741	C16orf54	0.590854	3.287791e-9	1.520077e-4	6.080309e-6
26	205263_at	38892_at	D87077	KIAA0240	0.588256	4.002456e-9	1.850496e-4	7.117291e-6
27	205263_at	220235_s_at	NM_018372	C1orf103	0.585895	4.778178e-9	2.209143e-4	8.182010e-6
28	205263_at	224788_at	AV700721	ARF6	0.584584	5.269129e-9	2.436129e-4	8.700461e-6
29	205263_at	224892_at	BF680495	PLDN	0.583597	5.670130e-9	2.621528e-4	9.039752e-6
30	205263_at	205296_at	AL365505	RBL1	0.582141	6.315009e-9	2.919681e-4	9.732271e-6
31	205263_at	220945_x_at	NM_018050	MANSC1	0.580940	6.899487e-9	3.189909e-4	1.029003e-5
32	205263_at	213918_s_at	BF221673	NIPBL	0.580737	7.002900e-9	3.237721e-4	1.011788e-5
33	205263_at	225501_at	AK027039	PHF6	0.579342	7.756996e-9	3.586370e-4	1.086779e-5
34	205263_at	225717_at	AI814587	KIAA1715	0.578404	8.306626e-9	3.840485e-4	1.129554e-5
35	205263_at	208995_s_at	U40763	PPIG	0.576538	9.513173e-9	4.398320e-4	1.256663e-5
36	205263_at	222390_at	AL135461	WAC	0.575549	1.021845e-8	4.724396e-4	1.312332e-5
37	205263_at	238614_x_at	AW954842	ZNF430	0.573988	1.143387e-8	5.286337e-4	1.428740e-5
38	205263_at	221963_x_at	BE999967		0.573384	1.193998e-8	5.520330e-4	1.452718e-5
39	1557258_a_at	37022_at	U41344	PRELP	0.572876	1.238288e-8	5.725102e-4	1.467975e-5
40	205263_at	212847_at	AL036840	FUBP1	0.572338	1.286808e-8	5.949429e-4	1.487357e-5
41	205263_at	201845_s_at	AB029551	RYBP	0.571634	1.353065e-8	6.255760e-4	1.525795e-5
42	205263_at	224586_x_at	BE784583	SUB1	0.570179	1.500561e-8	6.937695e-4	1.651832e-5
43	205263_at	204291_at	NM_014803	ZNF518A	0.569866	1.534243e-8	7.093419e-4	1.649632e-5
44	205263_at	212205_at	AA534860	H2AFV	0.569811	1.540171e-8	7.120826e-4	1.618370e-5
45	205263_at	218499_at	NM_016542	MST4	0.569263	1.601129e-8	7.402660e-4	1.645035e-5
46	205263_at	205034_at	NM_004702	CCNE2	0.568688	1.667491e-8	7.709477e-4	1.675973e-5
47	205263_at	205191_at	NM_006915	RP2	0.565974	2.017714e-8	9.328700e-4	1.984830e-5
48	205263_at	203310_at	NM_007269	STXBP3	0.565111	2.143042e-8	9.908142e-4	2.064196e-5
49	205263_at	224692_at	BF796046	PPP1R15B	0.563283	2.433458e-8	1.125085e-3	2.296091e-5
50	1557258_a_at	200661_at	NM_000308	CTSA	-0.562507	2.567815e-8	1.187204e-3	2.374407e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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