[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5133	204805_s_at	NM_006026	H1FX		H1 histone family, member X

Fetching correlation data, please wait...
Getting list of correlations for id 5133.
Getting list of p-values for id 5133.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.141 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204805_s_at	45653_at	AW026481	KCTD13	0.809751	1.115027e-20	2.577608e-16	2.577608e-16
2	204805_s_at	212576_at	AB011116	MGRN1	0.774969	5.126533e-18	1.185101e-13	5.925503e-14
3	204805_s_at	217991_x_at	NM_018070	SSBP3	0.747167	3.297314e-16	7.622400e-12	2.540800e-12
4	204805_s_at	217903_at	NM_013403	STRN4	0.735435	1.630893e-15	3.770136e-11	9.425341e-12
5	204805_s_at	213521_at	AW575379	PTPN18	0.732799	2.308820e-15	5.337299e-11	1.067460e-11
6	204805_s_at	205640_at	NM_000694	ALDH3B1	0.732471	2.410226e-15	5.571721e-11	9.286201e-12
7	204805_s_at	1553993_s_at	BC024312	MED25	0.729121	3.724941e-15	8.610947e-11	1.230135e-11
8	204805_s_at	204372_s_at	NM_003685	KHSRP	0.725869	5.648549e-15	1.305775e-10	1.632219e-11
9	204805_s_at	206074_s_at	NM_002131	HMGA1	0.725383	6.008163e-15	1.388907e-10	1.543230e-11
10	204805_s_at	202275_at	NM_000402	G6PD	0.723802	7.337321e-15	1.696169e-10	1.696169e-11
11	204805_s_at	213038_at	AL031602	RNF19B	0.723271	7.844161e-15	1.813335e-10	1.648486e-11
12	204805_s_at	218255_s_at	NM_022452	FBRS	0.720711	1.080201e-14	2.497102e-10	2.080918e-11
13	204805_s_at	225935_at	AI350995		0.710434	3.769187e-14	8.713229e-10	6.702484e-11
14	204805_s_at	218151_x_at	NM_024531	GPR172A	0.709137	4.396411e-14	1.016318e-9	7.259416e-11
15	204805_s_at	221269_s_at	NM_031286	SH3BGRL3	0.708276	4.866621e-14	1.125017e-9	7.500111e-11
16	204805_s_at	204947_at	NM_005225	E2F1	0.706793	5.793515e-14	1.339287e-9	8.370543e-11
17	204805_s_at	208713_at	BF724216	HNRNPUL1	0.704580	7.499672e-14	1.733699e-9	1.019823e-10
18	204805_s_at	203085_s_at	BC000125	TGFB1	0.704053	7.972007e-14	1.842889e-9	1.023827e-10
19	204805_s_at	224821_at	AL520200	ABHD14B	0.703903	8.112153e-14	1.875286e-9	9.869929e-11
20	204805_s_at	201168_x_at	NM_004309	ARHGDIA	0.703663	8.339710e-14	1.927891e-9	9.639454e-11
21	204805_s_at	221534_at	AF073483	C11orf68	0.703626	8.376167e-14	1.936319e-9	9.220565e-11
22	204805_s_at	224991_at	AI819630	CMIP	0.703424	8.573627e-14	1.981965e-9	9.008934e-11
23	204805_s_at	227528_s_at	AI394529	MLL2	0.702845	9.166353e-14	2.118986e-9	9.212981e-11
24	204805_s_at	209044_x_at	BC004273	SF3B4	0.702099	9.987353e-14	2.308776e-9	9.619902e-11
25	204805_s_at	218661_at	NM_024845	NAT15	0.702057	1.003654e-13	2.320148e-9	9.280591e-11
26	204805_s_at	202383_at	NM_004187	KDM5C	0.701845	1.028355e-13	2.377249e-9	9.143266e-11
27	204805_s_at	204408_at	NM_014481	APEX2	0.699006	1.421770e-13	3.286706e-9	1.217298e-10
28	204805_s_at	210649_s_at	AF231056	ARID1A	0.696714	1.841700e-13	4.257457e-9	1.520520e-10
29	204805_s_at	36004_at	AF074382	IKBKG	0.695589	2.089417e-13	4.830105e-9	1.665553e-10
30	204805_s_at	224186_s_at	AL136729	RNF123	0.693434	2.656218e-13	6.140379e-9	2.046793e-10
31	204805_s_at	227002_at	BF515132	FAM78A	0.693319	2.690368e-13	6.219324e-9	2.006233e-10
32	204805_s_at	218619_s_at	NM_003173	SUV39H1	0.692998	2.787741e-13	6.444421e-9	2.013882e-10
33	204805_s_at	37652_at	AB002328	CABIN1	0.692524	2.937626e-13	6.790911e-9	2.057852e-10
34	204805_s_at	202621_at	NM_001571	IRF3	0.692207	3.042583e-13	7.033539e-9	2.068688e-10
35	204805_s_at	203317_at	NM_012455	PSD4	0.692034	3.101162e-13	7.168957e-9	2.048273e-10
36	204805_s_at	209241_x_at	AB041926	MINK1	0.691079	3.444582e-13	7.962839e-9	2.211900e-10
37	204805_s_at	218387_s_at	NM_012088	PGLS	0.690444	3.693231e-13	8.537641e-9	2.307471e-10
38	204805_s_at	217931_at	BC004423	CNPY3	0.687926	4.859882e-13	1.123459e-8	2.956471e-10
39	204805_s_at	202624_s_at	NM_012295	CABIN1	0.686784	5.499332e-13	1.271281e-8	3.259694e-10
40	204805_s_at	226076_s_at	AI174548	MBD6	0.686530	5.652263e-13	1.306634e-8	3.266584e-10
41	204805_s_at	212047_s_at	AK025329	RNF167	0.685947	6.018916e-13	1.391393e-8	3.393641e-10
42	204805_s_at	200808_s_at	NM_003461	ZYX	0.685867	6.070863e-13	1.403401e-8	3.341432e-10
43	204805_s_at	227134_at	AI341537	SYTL1	0.685163	6.547947e-13	1.513689e-8	3.520207e-10
44	204805_s_at	48659_at	W60802	MIIP	0.685092	6.597921e-13	1.525241e-8	3.466458e-10
45	204805_s_at	1553015_a_at	NM_004260	RECQL4	0.684331	7.157677e-13	1.654640e-8	3.676978e-10
46	204805_s_at	227042_at	BE218514	YDJC	0.683411	7.896907e-13	1.825528e-8	3.968539e-10
47	204805_s_at	203274_at	NM_012151		0.683162	8.108854e-13	1.874524e-8	3.988348e-10
48	204805_s_at	46323_at	AL120741	CANT1	0.681536	9.635509e-13	2.227441e-8	4.640501e-10
49	204805_s_at	227527_at	AI394529	MLL2	0.680861	1.034719e-12	2.391961e-8	4.881553e-10
50	204805_s_at	204267_x_at	NM_004203	PKMYT1	0.680704	1.052021e-12	2.431957e-8	4.863914e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation