[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6541	208690_s_at	BC000915	PDLIM1		PDZ and LIM domain 1

Fetching correlation data, please wait...
Getting list of correlations for id 6541.
Getting list of p-values for id 6541.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.147 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208690_s_at	210038_at	AL137145	PRKCQ	0.699035	1.417079e-13	3.275862e-9	3.275862e-9
2	208690_s_at	217722_s_at	NM_016645	NGRN	0.699001	1.422597e-13	3.288617e-9	1.644308e-9
3	208690_s_at	214039_s_at	T15777	LAPTM4B	0.694664	2.316771e-13	5.355679e-9	1.785226e-9
4	208690_s_at	206254_at	NM_001963	EGF	0.688597	4.518530e-13	1.044549e-8	2.611371e-9
5	208690_s_at	217080_s_at	Y19026	HOMER2	0.680174	1.112348e-12	2.571415e-8	5.142829e-9
6	208690_s_at	227750_at	AL137629	KALRN	0.673789	2.159544e-12	4.992218e-8	8.320363e-9
7	208690_s_at	203006_at	NM_005539	INPP5A	0.671473	2.735638e-12	6.323974e-8	9.034248e-9
8	208690_s_at	1552309_a_at	NM_144573	NEXN	0.667355	4.144741e-12	9.581397e-8	1.197675e-8
9	208690_s_at	208029_s_at	NM_018407	LAPTM4B	0.664878	5.304687e-12	1.226284e-7	1.362538e-8
10	208690_s_at	243_g_at	M64571	MAP4	0.664807	5.342112e-12	1.234936e-7	1.234936e-8
11	208690_s_at	204217_s_at	NM_005619	RTN2	0.661477	7.416210e-12	1.714405e-7	1.558550e-8
12	208690_s_at	225278_at	BF593382	PRKAB2	0.654374	1.472544e-11	3.404081e-7	2.836734e-8
13	208690_s_at	211071_s_at	BC006471	MLLT11	0.652084	1.830002e-11	4.230417e-7	3.254167e-8
14	208690_s_at	210201_x_at	AF001383	BIN1	0.651687	1.899876e-11	4.391943e-7	3.137102e-8
15	208690_s_at	209695_at	BC003105	PTP4A3	0.651502	1.933272e-11	4.469146e-7	2.979431e-8
16	208690_s_at	218980_at	NM_025135	FHOD3	0.649053	2.432758e-11	5.623807e-7	3.514879e-8
17	208690_s_at	209200_at	AL536517	MEF2C	0.649049	2.433793e-11	5.626199e-7	3.309529e-8
18	208690_s_at	221211_s_at	NM_020152	C21orf7	0.645749	3.306361e-11	7.643315e-7	4.246286e-8
19	208690_s_at	206833_s_at	NM_001108	ACYP2	0.645265	3.457339e-11	7.992331e-7	4.206490e-8
20	208690_s_at	203781_at	NM_004891	MRPL33	0.645243	3.464384e-11	8.008618e-7	4.004309e-8
21	208690_s_at	226103_at	AF114264	NEXN	0.644023	3.875429e-11	8.958829e-7	4.266109e-8
22	208690_s_at	34408_at	AF004222	RTN2	0.643682	3.998368e-11	9.243028e-7	4.201376e-8
23	208690_s_at	209019_s_at	AF316873	PINK1	0.643245	4.161393e-11	9.619892e-7	4.182562e-8
24	208690_s_at	218550_s_at	NM_018205	LRRC20	0.640322	5.429190e-11	1.255066e-6	5.229441e-8
25	208690_s_at	209036_s_at	BC001917	MDH2	0.637916	6.742698e-11	1.558710e-6	6.234838e-8
26	208690_s_at	226856_at	BF793701	MUSTN1	0.637282	7.137192e-11	1.649905e-6	6.345787e-8
27	208690_s_at	218168_s_at	NM_020247	CABC1	0.635535	8.340362e-11	1.928041e-6	7.140894e-8
28	208690_s_at	200759_x_at	NM_003204	NFE2L1	0.635463	8.393671e-11	1.940365e-6	6.929875e-8
29	208690_s_at	214121_x_at	AA086229	PDLIM7	0.635382	8.454608e-11	1.954452e-6	6.739489e-8
30	208690_s_at	201849_at	NM_004052	BNIP3	0.633706	9.808267e-11	2.267377e-6	7.557924e-8
31	208690_s_at	205330_at	NM_002430	MN1	0.632441	1.096433e-10	2.534625e-6	8.176210e-8
32	208690_s_at	205417_s_at	NM_004393	DAG1	0.632374	1.102909e-10	2.549595e-6	7.967483e-8
33	208690_s_at	212228_s_at	AC004382	COQ9	0.632054	1.134337e-10	2.622247e-6	7.946202e-8
34	208690_s_at	203498_at	NM_005822	RCAN2	0.629883	1.371533e-10	3.170572e-6	9.325213e-8
35	208690_s_at	210039_s_at	L01087	PRKCQ	0.629466	1.422286e-10	3.287898e-6	9.393994e-8
36	208690_s_at	228396_at	AW274503	PRKG1	0.628982	1.483394e-10	3.429163e-6	9.525452e-8
37	208690_s_at	214439_x_at	AF043899	BIN1	0.627504	1.685957e-10	3.897427e-6	1.053359e-7
38	208690_s_at	200732_s_at	AL578310	PTP4A1	0.627297	1.716407e-10	3.967817e-6	1.044162e-7
39	208690_s_at	217911_s_at	NM_004281	BAG3	0.626503	1.837927e-10	4.248737e-6	1.089420e-7
40	208690_s_at	222905_s_at	AL558164	TMEM143	0.626033	1.913727e-10	4.423962e-6	1.105991e-7
41	208690_s_at	202734_at	NM_004240	TRIP10	0.625796	1.953094e-10	4.514967e-6	1.101211e-7
42	208690_s_at	204030_s_at	NM_014575	SCHIP1	0.625026	2.086475e-10	4.823304e-6	1.148406e-7
43	208690_s_at	229567_at	AI742370	FITM1	0.621593	2.794405e-10	6.459826e-6	1.502285e-7
44	208690_s_at	201568_at	NM_014402	UQCRQ	0.620614	3.035097e-10	7.016234e-6	1.594599e-7
45	208690_s_at	213793_s_at	BE550452	HOMER1	0.620079	3.174974e-10	7.339588e-6	1.631019e-7
46	208690_s_at	226612_at	H17038	UBE2QL1	0.619288	3.393061e-10	7.843739e-6	1.705161e-7
47	208690_s_at	218094_s_at	NM_018478		0.618199	3.717065e-10	8.592738e-6	1.828242e-7
48	208690_s_at	212567_s_at	AL523310	MAP4	0.617830	3.833575e-10	8.862075e-6	1.846266e-7
49	208690_s_at	226388_at	AI675780	TCEA3	0.617718	3.869437e-10	8.944978e-6	1.825506e-7
50	208690_s_at	202646_s_at	AA167775	CSDE1	0.617696	3.876595e-10	8.961525e-6	1.792305e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation