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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
11103	217793_at	AL575337	RAB11B		RAB11B, member RAS oncogene family
22461	34478_at	X79780	RAB11B		RAB11B, member RAS oncogene family

Fetching correlation data, please wait...
Getting list of correlations for id 11103.
Getting list of p-values for id 11103.
1 of 2 done.
Getting list of correlations for id 22461.
Getting list of p-values for id 22461.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.184 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	217793_at	229265_at	AA927480	SKI	0.734951	1.738943e-15	8.039828e-11	8.039828e-11
2	217793_at	214241_at	AA723057	NDUFB8	0.704630	7.455714e-14	3.447075e-9	1.723537e-9
3	217793_at	45653_at	AW026481	KCTD13	0.702088	1.000057e-13	4.623666e-9	1.541222e-9
4	217793_at	1553993_s_at	BC024312	MED25	0.685653	6.212134e-13	2.872118e-8	7.180295e-9
5	217793_at	214246_x_at	AI859060	MINK1	0.682419	8.774689e-13	4.056890e-8	8.113779e-9
6	217793_at	224658_x_at	AL530612	PACS1	0.681706	9.463319e-13	4.375271e-8	7.292118e-9
7	217793_at	200709_at	NM_000801	FKBP1A	0.681155	1.003149e-12	4.637958e-8	6.625655e-9
8	217793_at	40829_at	AB028960	WDTC1	0.677501	1.471499e-12	6.803330e-8	8.504163e-9
9	217793_at	AFFX-HSAC07/X00351_3_at	AFFX-HSAC07/X00351_3	ACTB	0.674824	1.941393e-12	8.975836e-8	9.973151e-9
10	217793_at	227527_at	AI394529	MLL2	0.673371	2.254030e-12	1.042128e-7	1.042128e-8
11	217793_at	206074_s_at	NM_002131	HMGA1	0.664581	5.463086e-12	2.525803e-7	2.296185e-8
12	217793_at	55065_at	AL120554	MARK4	0.664279	5.629004e-12	2.602514e-7	2.168761e-8
13	34478_at	209344_at	BC002827	TPM4	0.661136	7.667758e-12	3.545111e-7	2.727009e-8
14	34478_at	234068_s_at	AC006942	AP2A1	0.661065	7.720627e-12	3.569555e-7	2.549682e-8
15	217793_at	213038_at	AL031602	RNF19B	0.657756	1.064714e-11	4.922600e-7	3.281734e-8
16	217793_at	37462_i_at	L21990	SF3A2	0.657269	1.115829e-11	5.158922e-7	3.224326e-8
17	34478_at	201461_s_at	NM_004759	MAPKAPK2	0.653071	1.666734e-11	7.705976e-7	4.532927e-8
18	217793_at	208713_at	BF724216	HNRNPUL1	0.649319	2.373055e-11	1.097158e-6	6.095323e-8
19	217793_at	221748_s_at	AL046979	TNS1	0.648691	2.516419e-11	1.163441e-6	6.123374e-8
20	217793_at	209241_x_at	AB041926	MINK1	0.647792	2.736131e-11	1.265023e-6	6.325113e-8
21	34478_at	210317_s_at	U28936	YWHAE	0.647511	2.808667e-11	1.298559e-6	6.183615e-8
22	217793_at	38964_r_at	U12707	WAS	0.643878	3.927069e-11	1.815641e-6	8.252915e-8
23	217793_at	225703_at	AL583509	FBRSL1	0.640695	5.248625e-11	2.426649e-6	1.055065e-7
24	217793_at	218506_x_at	NM_018459	GLYR1	0.640227	5.475777e-11	2.531671e-6	1.054863e-7
25	217793_at	209357_at	AF109161	CITED2	0.638185	6.581783e-11	3.043022e-6	1.217209e-7
26	217793_at	32502_at	AL041124	GDPD5	0.635008	8.740260e-11	4.040972e-6	1.554220e-7
27	217793_at	203055_s_at	NM_004706	ARHGEF1	0.634571	9.085748e-11	4.200705e-6	1.555817e-7
28	34478_at	201332_s_at	NM_003153	STAT6	0.633670	9.838823e-11	4.548882e-6	1.624601e-7
29	34478_at	216971_s_at	Z54367	PLEC	0.633377	1.009663e-10	4.668078e-6	1.609682e-7
30	34478_at	216253_s_at	N73272	PARVB	0.630667	1.280945e-10	5.922322e-6	1.974107e-7
31	34478_at	200739_s_at	BG338532	SUMO3	0.629393	1.431347e-10	6.617690e-6	2.134739e-7
32	34478_at	209037_s_at	AW182860	EHD1	0.627475	1.690229e-10	7.814604e-6	2.442064e-7
33	217793_at	201473_at	NM_002229	JUNB	0.627301	1.715744e-10	7.932570e-6	2.403809e-7
34	217793_at	227021_at	BE348688	KDM1B	0.626987	1.762877e-10	8.150484e-6	2.397201e-7
35	217793_at	40149_at	AL049924	SH2B1	0.625274	2.042612e-10	9.443813e-6	2.698232e-7
36	34478_at	1554574_a_at	AF361370	CYB5R3	0.624991	2.092759e-10	9.675660e-6	2.687683e-7
37	217793_at	204805_s_at	NM_006026	H1FX	0.624936	2.102629e-10	9.721297e-6	2.627378e-7
38	34478_at	221851_at	AI073983	DCAF15	0.624457	2.190548e-10	1.012778e-5	2.665205e-7
39	217793_at	218255_s_at	NM_022452	FBRS	0.624006	2.276437e-10	1.052488e-5	2.698687e-7
40	217793_at	202383_at	NM_004187	KDM5C	0.623534	2.369912e-10	1.095705e-5	2.739262e-7
41	217793_at	218381_s_at	NM_007279	U2AF2	0.622308	2.630277e-10	1.216082e-5	2.966054e-7
42	34478_at	223635_s_at	BC003605	SSBP3	0.620527	3.057565e-10	1.413635e-5	3.365796e-7
43	217793_at	213084_x_at	BF125158	RPL23A	-0.620397	3.091280e-10	1.429222e-5	3.323773e-7
44	217793_at	208998_at	U94592	UCP2	0.619656	3.289997e-10	1.521097e-5	3.457039e-7
45	217793_at	208825_x_at	U43701	RPL23A	-0.617714	3.870719e-10	1.789588e-5	3.976863e-7
46	217793_at	205449_at	NM_013299	SAC3D1	0.617701	3.874914e-10	1.791528e-5	3.894625e-7
47	217793_at	205400_at	NM_000377	WAS	0.617560	3.920780e-10	1.812734e-5	3.856880e-7
48	217793_at	204372_s_at	NM_003685	KHSRP	0.617519	3.934228e-10	1.818951e-5	3.789481e-7
49	217793_at	212649_at	AL079292	DHX29	-0.617428	3.964268e-10	1.832840e-5	3.740489e-7
50	217793_at	226111_s_at	BF525395	ZNF385A	0.616461	4.296353e-10	1.986376e-5	3.972752e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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