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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
6157	207495_at	NM_004249	RAB28		RAB28, member RAS oncogene family
16781	227003_at	BG150494	RAB28		RAB28, member RAS oncogene family

Fetching correlation data, please wait...
Getting list of correlations for id 6157.
Getting list of p-values for id 6157.
1 of 2 done.
Getting list of correlations for id 16781.
Getting list of p-values for id 16781.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.235 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	207495_at	221428_s_at	NM_030921	TBL1XR1	0.755213	1.046280e-16	4.837369e-12	4.837369e-12
2	207495_at	204426_at	NM_006815	TMED2	0.744309	4.906647e-16	2.268539e-11	1.134270e-11
3	207495_at	211450_s_at	D89646	MSH6	0.743064	5.824106e-16	2.692717e-11	8.975723e-12
4	227003_at	230734_x_at	AI279536		0.740391	8.388502e-16	3.878340e-11	9.695850e-12
5	207495_at	218129_s_at	NM_006166	NFYB	0.728317	4.130942e-15	1.909900e-10	3.819800e-11
6	207495_at	200624_s_at	AA577695	MATR3	0.727787	4.421876e-15	2.044410e-10	3.407350e-11
7	207495_at	204427_s_at	NM_006815	TMED2	0.725536	5.892701e-15	2.724431e-10	3.892045e-11
8	207495_at	202955_s_at	AF084520	ARFGEF1	0.722077	9.111016e-15	4.212387e-10	5.265484e-11
9	207495_at	208811_s_at	AF080569		0.721366	9.957173e-15	4.603600e-10	5.115111e-11
10	227003_at	1569129_s_at	BC016013	C3orf38	0.720114	1.163315e-14	5.378471e-10	5.378471e-11
11	227003_at	227162_at	BF214688	ZBTB26	0.719658	1.230914e-14	5.691008e-10	5.173644e-11
12	227003_at	212615_at	AI742305	CHD9	0.718502	1.419698e-14	6.563830e-10	5.469858e-11
13	207495_at	210786_s_at	M93255	FLI1	0.714693	2.260503e-14	1.045121e-9	8.039393e-11
14	227003_at	235648_at	AA742659	ZNF567	0.711656	3.257868e-14	1.506243e-9	1.075888e-10
15	207495_at	217301_x_at	X71810	RBBP4	0.710871	3.578199e-14	1.654345e-9	1.102896e-10
16	207495_at	205996_s_at	NM_013411	AK2	0.710811	3.603995e-14	1.666271e-9	1.041419e-10
17	207495_at	1554678_s_at	AB066484	HNRPDL	0.710559	3.713582e-14	1.716937e-9	1.009963e-10
18	227003_at	219171_s_at	NM_007345	ZNF236	0.707208	5.518048e-14	2.551214e-9	1.417341e-10
19	207495_at	201504_s_at	AI435302	TSN	0.706893	5.726139e-14	2.647423e-9	1.393381e-10
20	207495_at	202816_s_at	AW292882	SS18	0.706790	5.795261e-14	2.679381e-9	1.339691e-10
21	207495_at	210543_s_at	U34994	PRKDC	0.706775	5.806024e-14	2.684357e-9	1.278265e-10
22	227003_at	228324_at	BF031819	C9orf41	0.706597	5.928131e-14	2.740812e-9	1.245824e-10
23	227003_at	235694_at	N49233	TCFL5	0.705131	7.034190e-14	3.252187e-9	1.413995e-10
24	207495_at	211825_s_at	AF327066		0.704400	7.658158e-14	3.540673e-9	1.475280e-10
25	207495_at	1554834_a_at	AY062002	RASSF5	0.704271	7.773340e-14	3.593926e-9	1.437570e-10
26	207495_at	1554148_a_at	BC014416	SLC33A1	0.704022	8.000691e-14	3.699039e-9	1.422707e-10
27	227003_at	231967_at	AI913146	PHF20L1	0.703805	8.204216e-14	3.793137e-9	1.404866e-10
28	207495_at	201742_x_at	NM_006924	SRSF1	0.703739	8.266896e-14	3.822117e-9	1.365042e-10
29	207495_at	200641_s_at	U28964	YWHAZ	0.703436	8.562224e-14	3.958659e-9	1.365055e-10
30	207495_at	201571_s_at	AI656493	DCTD	0.702963	9.042029e-14	4.180492e-9	1.393497e-10
31	207495_at	200008_s_at	D13988	GDI2	0.702636	9.389499e-14	4.341141e-9	1.400368e-10
32	207495_at	201091_s_at	BE748755	CBX3	0.701195	1.107891e-13	5.122224e-9	1.600695e-10
33	207495_at	222846_at	AB038995	RAB8B	0.700557	1.191720e-13	5.509800e-9	1.669636e-10
34	207495_at	200769_s_at	NM_005911	MAT2A	0.699898	1.284696e-13	5.939664e-9	1.746960e-10
35	207495_at	216266_s_at	AK025637	ARFGEF1	0.699312	1.373273e-13	6.349189e-9	1.814054e-10
36	207495_at	201096_s_at	AL537042	ARF4	0.698790	1.457026e-13	6.736416e-9	1.871227e-10
37	207495_at	209131_s_at	U55936	SNAP23	0.698155	1.565700e-13	7.238856e-9	1.956448e-10
38	227003_at	228709_at	BF109993	TPR	0.697618	1.663597e-13	7.691477e-9	2.024073e-10
39	207495_at	222473_s_at	AI807103	ERBB2IP	0.696679	1.848922e-13	8.548306e-9	2.191873e-10
40	207495_at	201444_s_at	NM_005765	ATP6AP2	0.695812	2.037996e-13	9.422472e-9	2.355618e-10
41	207495_at	201339_s_at	NM_002979	SCP2	0.695442	2.124033e-13	9.820255e-9	2.395184e-10
42	227003_at	228941_at	AW295395	ALG10B	0.694949	2.244190e-13	1.037579e-8	2.470426e-10
43	227003_at	1558956_s_at	AI473255	IFT80	0.694414	2.382071e-13	1.101327e-8	2.561225e-10
44	227003_at	225765_at	AA527296	TNPO1	0.691951	3.129473e-13	1.446881e-8	3.288365e-10
45	207495_at	208055_s_at	NM_015601	HERC4	0.689869	3.933400e-13	1.818568e-8	4.041262e-10
46	227003_at	228363_at	BF109251	XIAP	0.688650	4.492566e-13	2.077093e-8	4.515420e-10
47	207495_at	202101_s_at	NM_002881	RALB	0.688393	4.619909e-13	2.135969e-8	4.544614e-10
48	227003_at	230141_at	AI640594	ARID4A	0.688150	4.743482e-13	2.193102e-8	4.568962e-10
49	227003_at	204291_at	NM_014803	ZNF518A	0.686240	5.831854e-13	2.696299e-8	5.502652e-10
50	207495_at	202874_s_at	NM_001695	ATP6V1C1	0.685682	6.192967e-13	2.863256e-8	5.726512e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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