[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5595	205685_at	BG236280	CD86		CD86 molecule
7906	210895_s_at	L25259	CD86		CD86 molecule

Fetching correlation data, please wait...
Getting list of correlations for id 5595.
Getting list of p-values for id 5595.
1 of 2 done.
Getting list of correlations for id 7906.
Getting list of p-values for id 7906.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.178 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	210895_s_at	223922_x_at	AB013104	MS4A6A	0.725191	6.155998e-15	2.846164e-10	2.846164e-10
2	210895_s_at	206584_at	NM_015364	LY96	0.718012	1.507867e-14	6.971474e-10	3.485737e-10
3	210895_s_at	224356_x_at	AF237908	MS4A6A	0.671262	2.795038e-12	1.292258e-7	4.307527e-8
4	210895_s_at	223280_x_at	AF253977	MS4A6A	0.666997	4.295909e-12	1.986171e-7	4.965427e-8
5	210895_s_at	213988_s_at	BE971383	SAT1	0.666366	4.575364e-12	2.115374e-7	4.230747e-8
6	210895_s_at	204787_at	NM_007268	VSIG4	0.647855	2.720214e-11	1.257664e-6	2.096106e-7
7	210895_s_at	217388_s_at	D55639	KYNU	0.634584	9.074673e-11	4.195585e-6	5.993692e-7
8	210895_s_at	1555756_a_at	AF400600	CLEC7A	0.631272	1.214931e-10	5.617111e-6	7.021388e-7
9	210895_s_at	204502_at	NM_015474	SAMHD1	0.627401	1.700988e-10	7.864350e-6	8.738166e-7
10	210895_s_at	223344_s_at	AB026043	MS4A7	0.622095	2.678149e-10	1.238216e-5	1.238216e-6
11	210895_s_at	229383_at	AI707896	MARCH1	0.621346	2.853349e-10	1.319217e-5	1.199289e-6
12	210895_s_at	224358_s_at	AF237916	MS4A7	0.619742	3.266294e-10	1.510138e-5	1.258449e-6
13	210895_s_at	203473_at	NM_007256	SLCO2B1	0.618452	3.639233e-10	1.682563e-5	1.294279e-6
14	210895_s_at	219607_s_at	NM_024021	MS4A4A	0.618380	3.661388e-10	1.692806e-5	1.209147e-6
15	210895_s_at	204204_at	NM_001860	SLC31A2	0.616072	4.437523e-10	2.051644e-5	1.367763e-6
16	210895_s_at	230550_at	AA045175	MS4A6A	0.615924	4.491987e-10	2.076825e-5	1.298016e-6
17	210895_s_at	203561_at	NM_021642	FCGR2A	0.613310	5.573799e-10	2.576990e-5	1.515876e-6
18	210895_s_at	203645_s_at	NM_004244	CD163	0.612271	6.069269e-10	2.806066e-5	1.558925e-6
19	210895_s_at	205098_at	AI421071	CCR1	0.612114	6.148063e-10	2.842496e-5	1.496050e-6
20	210895_s_at	209732_at	BC005254	CLEC2B	0.611954	6.229084e-10	2.879954e-5	1.439977e-6
21	210895_s_at	1555728_a_at	AF354928	MS4A4A	0.611751	6.333254e-10	2.928117e-5	1.394341e-6
22	210895_s_at	206420_at	NM_005849	IGSF6	0.609677	7.498089e-10	3.466667e-5	1.575758e-6
23	210895_s_at	205859_at	NM_004271	LY86	0.605881	1.018119e-9	4.707170e-5	2.046596e-6
24	210895_s_at	218035_s_at	NM_019027	RBM47	0.605190	1.075907e-9	4.974348e-5	2.072645e-6
25	210895_s_at	211368_s_at	U13700	CASP1	0.600781	1.525923e-9	7.054951e-5	2.821980e-6
26	210895_s_at	223343_at	AI301935	MS4A7	0.595816	2.247523e-9	1.039120e-4	3.996614e-6
27	210895_s_at	209970_x_at	M87507	CASP1	0.592589	2.880539e-9	1.331788e-4	4.932549e-6
28	210895_s_at	213566_at	NM_005615	RNASE6	0.591857	3.045984e-9	1.408280e-4	5.029572e-6
29	210895_s_at	219519_s_at	NM_023068	SIGLEC1	0.590765	3.310191e-9	1.530434e-4	5.277358e-6
30	210895_s_at	235385_at	AI935334	MARCH1	0.590047	3.495520e-9	1.616119e-4	5.387063e-6
31	210895_s_at	231747_at	NM_006639	CYSLTR1	0.589975	3.514820e-9	1.625042e-4	5.242070e-6
32	210895_s_at	202953_at	NM_000491	C1QB	0.585881	4.783398e-9	2.211556e-4	6.911113e-6
33	210895_s_at	214467_at	NM_003608	GPR65	0.582707	6.056516e-9	2.800170e-4	8.485363e-6
34	210895_s_at	1555790_a_at	BC036301		0.582322	6.231159e-9	2.880914e-4	8.473276e-6
35	210895_s_at	206214_at	NM_005084	PLA2G7	0.581881	6.437644e-9	2.976380e-4	8.503943e-6
36	210895_s_at	210564_x_at	AF009619	CFLAR	0.580282	7.240999e-9	3.347803e-4	9.299454e-6
37	210895_s_at	218232_at	NM_015991	C1QA	0.579684	7.565348e-9	3.497763e-4	9.453414e-6
38	210895_s_at	204222_s_at	NM_006851	GLIPR1	0.577651	8.774995e-9	4.057031e-4	1.067640e-5
39	210895_s_at	222876_s_at	AI761520	ADAP2	0.576852	9.298770e-9	4.299193e-4	1.102357e-5
40	210895_s_at	211991_s_at	M27487	HLA-DPA1	0.571947	1.323295e-8	6.118122e-4	1.529531e-5
41	205685_at	219519_s_at	NM_023068	SIGLEC1	0.571435	1.372441e-8	6.345342e-4	1.547644e-5
42	210895_s_at	1553851_at	NM_152323	SPIC	0.570941	1.421572e-8	6.572496e-4	1.564880e-5
43	210895_s_at	202838_at	NM_000147	FUCA1	0.568611	1.676614e-8	7.751658e-4	1.802711e-5
44	210895_s_at	215049_x_at	Z22969	CD163	0.568602	1.677602e-8	7.756224e-4	1.762778e-5
45	210895_s_at	222496_s_at	AW241742	RBM47	0.567844	1.769642e-8	8.181763e-4	1.818170e-5
46	210895_s_at	239453_at	AA262084		0.565956	2.020226e-8	9.340314e-4	2.030503e-5
47	205685_at	215425_at	AL049332	BTG3	0.564158	2.290110e-8	1.058809e-3	2.252786e-5
48	210895_s_at	221679_s_at	AF225418	ABHD6	0.563469	2.402328e-8	1.110692e-3	2.313943e-5
49	210895_s_at	224917_at	BF674052		0.561192	2.811616e-8	1.299922e-3	2.652903e-5
50	210895_s_at	205099_s_at	NM_001295	CCR1	0.560450	2.958710e-8	1.367930e-3	2.735860e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation