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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5063	204681_s_at	NM_012294	RAPGEF5		Rap guanine nucleotide exchange factor (GEF) 5

Fetching correlation data, please wait...
Getting list of correlations for id 5063.
Getting list of p-values for id 5063.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.139 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204681_s_at	227646_at	BG435302	EBF1	0.668104	3.844934e-12	8.888333e-8	8.888333e-8
2	204681_s_at	232204_at	AF208502	EBF1	0.663896	5.846056e-12	1.351433e-7	6.757164e-8
3	204681_s_at	224759_s_at	AK001731	C12orf23	0.635864	8.099693e-11	1.872406e-6	6.241354e-7
4	204681_s_at	225308_s_at	AB051515	TANC1	0.617994	3.781348e-10	8.741342e-6	2.185336e-6
5	204681_s_at	213891_s_at	AI927067	TCF4	0.614468	5.066865e-10	1.171307e-5	2.342614e-6
6	204681_s_at	213058_at	AL033538	TTC28	0.614232	5.166396e-10	1.194316e-5	1.990526e-6
7	204681_s_at	212970_at	AI694303	APBB2	0.613385	5.539281e-10	1.280516e-5	1.829308e-6
8	204681_s_at	223366_at	BC004287	ZNF704	0.609169	7.813046e-10	1.806142e-5	2.257677e-6
9	204681_s_at	202011_at	NM_003257	TJP1	0.601875	1.399918e-9	3.236190e-5	3.595767e-6
10	204681_s_at	225227_at	AW294869		0.597783	1.929387e-9	4.460163e-5	4.460163e-6
11	204681_s_at	203787_at	NM_012446	SSBP2	0.595648	2.276760e-9	5.263185e-5	4.784714e-6
12	204681_s_at	238919_at	R49295		0.592438	2.913916e-9	6.736101e-5	5.613417e-6
13	204681_s_at	212624_s_at	BF339445	CHN1	0.591192	3.204515e-9	7.407876e-5	5.698367e-6
14	204681_s_at	210517_s_at	AB003476	AKAP12	0.591016	3.247647e-9	7.507586e-5	5.362561e-6
15	204681_s_at	202620_s_at	NM_000935	PLOD2	0.586757	4.479644e-9	1.035559e-4	6.903728e-6
16	204681_s_at	218613_at	NM_018422	PSD3	0.585387	4.962942e-9	1.147283e-4	7.170520e-6
17	204681_s_at	202733_at	NM_004199	P4HA2	0.585240	5.017676e-9	1.159936e-4	6.823153e-6
18	204681_s_at	228661_s_at	AI768374		0.584064	5.477015e-9	1.266121e-4	7.034008e-6
19	204681_s_at	201860_s_at	NM_000930	PLAT	0.581580	6.581696e-9	1.521491e-4	8.007846e-6
20	204681_s_at	226043_at	AI242661	GPSM1	0.576945	9.236507e-9	2.135203e-4	1.067602e-5
21	204681_s_at	226713_at	AI247881	CCDC50	0.576594	9.474253e-9	2.190163e-4	1.042935e-5
22	204681_s_at	212522_at	W73272	PDE8A	0.576195	9.751974e-9	2.254364e-4	1.024711e-5
23	204681_s_at	227798_at	AU146891	SMAD1	0.573825	1.156871e-8	2.674338e-4	1.162756e-5
24	204681_s_at	210139_s_at	L03203	PMP22	0.572790	1.245910e-8	2.880171e-4	1.200071e-5
25	204681_s_at	225189_s_at	AA194149	RAPH1	0.572712	1.252876e-8	2.896274e-4	1.158510e-5
26	204681_s_at	204257_at	NM_021727	FADS3	0.572440	1.277444e-8	2.953068e-4	1.135795e-5
27	204681_s_at	212985_at	BF115739	APBB2	0.567187	1.853297e-8	4.284266e-4	1.586765e-5
28	204681_s_at	207826_s_at	NM_002167	ID3	0.566171	1.990066e-8	4.600436e-4	1.643013e-5
29	204681_s_at	202724_s_at	NM_002015	FOXO1	0.565757	2.048493e-8	4.735501e-4	1.632931e-5
30	204681_s_at	225021_at	AA861416	ZNF532	0.565663	2.062074e-8	4.766897e-4	1.588966e-5
31	204681_s_at	228555_at	AA029441	CAMK2D	0.565263	2.120387e-8	4.901699e-4	1.581193e-5
32	204681_s_at	202342_s_at	NM_015271	TRIM2	0.563898	2.331846e-8	5.390529e-4	1.684540e-5
33	204681_s_at	205407_at	NM_021111	RECK	0.563375	2.417952e-8	5.589580e-4	1.693812e-5
34	204681_s_at	225188_at	AA194149	RAPH1	0.563354	2.421537e-8	5.597867e-4	1.646431e-5
35	204681_s_at	235278_at	BF032500	MACROD2	0.563228	2.442781e-8	5.646977e-4	1.613422e-5
36	204681_s_at	205251_at	NM_022817	PER2	0.562007	2.657982e-8	6.144456e-4	1.706793e-5
37	204681_s_at	225080_at	BG251821	MYO1C	0.561482	2.755926e-8	6.370875e-4	1.721858e-5
38	204681_s_at	232090_at	AI761578	LOC100128178	0.560676	2.913099e-8	6.734210e-4	1.772161e-5
39	204681_s_at	227530_at	BF511276	AKAP12	0.560610	2.926425e-8	6.765016e-4	1.734619e-5
40	204681_s_at	212364_at	BF432550	MYO1B	0.559807	3.092093e-8	7.147992e-4	1.786998e-5
41	204681_s_at	231940_at	AI369933	ZNF529	0.555225	4.222680e-8	9.761570e-4	2.380871e-5
42	204681_s_at	201324_at	NM_001423	EMP1	0.555139	4.247152e-8	9.818141e-4	2.337653e-5
43	204681_s_at	227351_at	H06491	C16orf52	0.554828	4.337270e-8	1.002647e-3	2.331737e-5
44	204681_s_at	203024_s_at	NM_020199	C5orf15	0.553560	4.723621e-8	1.091959e-3	2.481726e-5
45	204681_s_at	206493_at	NM_000419	ITGA2B	-0.552600	5.037504e-8	1.164520e-3	2.587822e-5
46	204681_s_at	221208_s_at	NM_024631	C11orf61	0.552579	5.044609e-8	1.166162e-3	2.535135e-5
47	204681_s_at	212233_at	AL523076	MAP1B	0.552172	5.183706e-8	1.198317e-3	2.549612e-5
48	204681_s_at	226545_at	AL110152	CD109	0.551904	5.277109e-8	1.219909e-3	2.541478e-5
49	204681_s_at	227408_s_at	AW008976	SNX25	0.551659	5.364164e-8	1.240034e-3	2.530681e-5
50	204681_s_at	201215_at	NM_005032	PLS3	0.551025	5.595914e-8	1.293607e-3	2.587215e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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