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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 14922.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14922 7987046 ENST00000459113 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 14922.
Getting list of p-values for id 14922.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.114 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7987046 7987137 ENST00000459113 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 7987046 7982356 ENST00000459113 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 7987046 7982267 ENST00000459113 link to infopage 0.980568 1.113466e-74 1.929303e-70 6.431011e-71
4 7987046 7982307 ENST00000410778 link to infopage 0.974542 1.052500e-68 1.823666e-64 4.559165e-65
5 7987046 7982282 ENST00000410778 link to infopage 0.974542 1.052500e-68 1.823666e-64 3.647332e-65
6 7987046 7982228 ENST00000459172 link to infopage 0.963667 7.221772e-61 1.251316e-56 2.085527e-57
7 7987046 7987112 ENST00000459172 link to infopage 0.963667 7.221772e-61 1.251316e-56 1.787595e-57
8 7987046 7982250 ENST00000459172 link to infopage 0.963667 7.221772e-61 1.251316e-56 1.564145e-57
9 7987046 7986945 ENST00000459172 link to infopage 0.958765 4.323505e-58 7.491338e-54 8.323708e-55
10 7987046 8067506 BC137326 C20orf151 link to infopage 0.782629 6.221506e-23 1.078000e-18 1.078000e-19
11 7987046 7950490 hsa-mir-326 link to infopage 0.781514 7.850927e-23 1.360330e-18 1.236664e-19
12 7987046 7995324 link to infopage 0.774831 3.078446e-22 5.334024e-18 4.445020e-19
13 7987046 7995344 link to infopage 0.773764 3.811973e-22 6.605005e-18 5.080773e-19
14 7987046 7918869 NM_002506 NGF link to infopage 0.772219 5.185182e-22 8.984366e-18 6.417404e-19
15 7987046 7995342 link to infopage 0.771223 6.314020e-22 1.094030e-17 7.293535e-19
16 7987046 7914361 NM_001856 COL16A1 link to infopage 0.767512 1.304080e-21 2.259579e-17 1.412237e-18
17 7987046 8086985 NM_000094 COL7A1 link to infopage 0.757732 8.284366e-21 1.435432e-16 8.443719e-18
18 7987046 7995336 link to infopage 0.750361 3.152663e-20 5.462619e-16 3.034788e-17
19 7987046 8060094 NM_148961 OTOS link to infopage 0.749670 3.565455e-20 6.177864e-16 3.251507e-17
20 7987046 8157383 NM_032888 COL27A1 link to infopage 0.746310 6.444799e-20 1.116690e-15 5.583452e-17
21 7987046 8125568 NM_080680 COL11A2 link to infopage 0.745393 7.561830e-20 1.310238e-15 6.239230e-17
22 7987046 7995348 link to infopage 0.743363 1.075043e-19 1.862727e-15 8.466943e-17
23 7987046 8075934 NM_014550 CARD10 link to infopage 0.739840 1.963837e-19 3.402741e-15 1.479453e-16
24 7987046 8079167 NM_001145030 C3orf77 link to infopage 0.737617 2.858106e-19 4.952241e-15 2.063434e-16
25 7987046 8104592 NM_012304 FBXL7 link to infopage 0.735205 4.276021e-19 7.409061e-15 2.963624e-16
26 7987046 8150433 NM_152568 NKX6-3 link to infopage 0.734874 4.517276e-19 7.827085e-15 3.010417e-16
27 7987046 7919380 AK128227 LOC100130236 link to infopage 0.734640 4.695986e-19 8.136735e-15 3.013606e-16
28 7987046 7919299 AK128227 LOC100130236 link to infopage 0.734640 4.695986e-19 8.136735e-15 2.905977e-16
29 7987046 8153101 NM_152888 COL22A1 link to infopage 0.733722 5.466187e-19 9.471262e-15 3.265952e-16
30 7987046 8007259 ENST00000225928 link to infopage 0.732365 6.833631e-19 1.184063e-14 3.946878e-16
31 7987046 7939665 NM_001012334 MDK link to infopage 0.730524 9.230218e-19 1.599320e-14 5.159096e-16
32 7987046 8108435 NM_181838 UBE2D2 link to infopage -0.730332 9.522847e-19 1.650024e-14 5.156324e-16
33 7987046 8040290 ENST00000364740 link to infopage 0.730273 9.614320e-19 1.665873e-14 5.048101e-16
34 7987046 7981447 NM_001100119 XRCC3 link to infopage 0.729900 1.021450e-18 1.769867e-14 5.205491e-16
35 7987046 8149652 NM_005144 HR link to infopage 0.727452 1.516205e-18 2.627128e-14 7.506079e-16
36 7987046 8035646 NM_023002 HAPLN4 link to infopage 0.726391 1.796902e-18 3.113493e-14 8.648591e-16
37 7987046 8104499 ENST00000296657 link to infopage 0.725825 1.966735e-18 3.407762e-14 9.210168e-16
38 7987046 7995334 link to infopage 0.724954 2.258903e-18 3.914001e-14 1.030000e-15
39 7987046 7928870 ENST00000363306 link to infopage 0.722894 3.127914e-18 5.419737e-14 1.389676e-15
40 7987046 7995332 link to infopage 0.722824 3.162812e-18 5.480205e-14 1.370051e-15
41 7987046 8036584 NM_002307 LGALS7 link to infopage 0.721352 3.983640e-18 6.902453e-14 1.683525e-15
42 7987046 7959880 ENST00000459050 link to infopage 0.717098 7.695924e-18 1.333473e-13 3.174935e-15
43 7987046 8088415 NM_007177 FAM107A link to infopage 0.716233 8.786136e-18 1.522374e-13 3.540404e-15
44 7987046 7945536 NM_016564 CEND1 link to infopage 0.715697 9.535431e-18 1.652204e-13 3.755009e-15
45 7987046 7952426 NM_014312 VSIG2 link to infopage 0.715461 9.884819e-18 1.712743e-13 3.806095e-15
46 7987046 8004385 NM_020795 NLGN2 link to infopage 0.714987 1.062268e-17 1.840592e-13 4.001287e-15
47 7987046 8028546 NM_002307 LGALS7 link to infopage 0.714834 1.087306e-17 1.883975e-13 4.008457e-15
48 7987046 7981872 ENST00000459232 link to infopage 0.713586 1.313625e-17 2.276119e-13 4.741914e-15
49 7987046 8045332 ENST00000458407 link to infopage 0.713027 1.429234e-17 2.476435e-13 5.053948e-15
50 7987046 8073623 NM_001044370 MPPED1 link to infopage 0.712511 1.544873e-17 2.676801e-13 5.353603e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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